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BSR_Ace_UAPBR_inlet_p_131793

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Displaying items 1-30 of 41 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BSR_Ace_UAPBR_inlet_p_131793_1
Arenimonas composti, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3..143
DNA (141bp) protein (47aa)
tuf; elongation factor Tu (EC:3.6.5.3)
Elongation factor Tu n=2 Tax=Reinekea blandensis MED297 RepID=A4BF46_9GAMM
Elongation factor Tu {ECO:0000256|RuleBase:RU004061}; Flags: Fragment;; TaxID=1121013 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas composti TR7-09 = DSM 18010.;"
BSR_Ace_UAPBR_inlet_p_131793_2
BJP_IG2103_SUB10_Xanthomonadales_61_45, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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216..527
DNA (312bp) protein (104aa)
30S ribosomal protein S10 n=1 Tax=Xanthomonas albilineans (strain GPE PC73 / CFBP 7063) RepID=D2UB69_XANAP
rpsJ; 30S ribosomal protein S10
Tax=BJP_IG2103_SUB10_Xanthomonadales_61_45
BSR_Ace_UAPBR_inlet_p_131793_3
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


538..1170
DNA (633bp) protein (211aa)
50S ribosomal protein L3 n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B3EF44
50S ribosomal protein L3
Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
BSR_Ace_UAPBR_inlet_p_131793_4
Arenimonas donghaensis, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1182..1784
DNA (603bp) protein (201aa)
50S ribosomal protein L4 {ECO:0000256|HAMAP-Rule:MF_01328}; TaxID=1121014 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas donghaensis DSM 18148 = HO3-R19.;"
50S ribosomal protein L4 id=2431944 bin=GWF1_Xanthomonadales_69_6 species=Pseudoxanthomonas suwonensis genus=Pseudoxanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
50S ribosomal protein L4/L1e
BSR_Ace_UAPBR_inlet_p_131793_5
Arenimonas metalli, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1781..2077
DNA (297bp) protein (99aa)
50S ribosomal protein L23 n=1 Tax=Xanthomonas RepID=UPI000262A838
50S ribosomal protein L23 {ECO:0000256|HAMAP-Rule:MF_01369, ECO:0000256|RuleBase:RU003935}; TaxID=1384056 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas metalli CF5-1.;"
rplW; 50S ribosomal protein L23
BSR_Ace_UAPBR_inlet_p_131793_6
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2089..2910
DNA (822bp) protein (274aa)
50S ribosomal protein L2 n=1 Tax=Dyella ginsengisoli RepID=UPI00034717B5
50S ribosomal protein L2 {ECO:0000256|HAMAP-Rule:MF_01320}; TaxID=345309 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Luteibacter.;" source="Luteibacter yeojuensis.;"
50S ribosomal protein L2
BSR_Ace_UAPBR_inlet_p_131793_7
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2923..3195
DNA (273bp) protein (91aa)
30S ribosomal protein S19 n=1 Tax=Dyella RepID=UPI0002F4468C
30S ribosomal protein S19
30S ribosomal protein S19 {ECO:0000256|HAMAP-Rule:MF_00531}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
BSR_Ace_UAPBR_inlet_p_131793_8
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3207..3542
DNA (336bp) protein (112aa)
50S ribosomal protein L22 n=1 Tax=Rhodanobacter sp. 115 RepID=I4WDS1_9GAMM
50S ribosomal protein L22 {ECO:0000256|HAMAP-Rule:MF_01331, ECO:0000256|RuleBase:RU004008}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
50S ribosomal protein L22
BSR_Ace_UAPBR_inlet_p_131793_9
RIFOXYA1_FULL_Xanthomonadales_68_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3561..4262
DNA (702bp) protein (234aa)
30S ribosomal protein S3 n=1 Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7URZ5_PSEUP
rpsC; 30S ribosomal protein S3
Tax=RIFOXYA1_FULL_Xanthomonadales_68_6_curated
BSR_Ace_UAPBR_inlet_p_131793_10
Arenimonas oryziterrae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


4274..4687
DNA (414bp) protein (138aa)
50S ribosomal protein L16 n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B5F95A
50S ribosomal protein L16 {ECO:0000256|HAMAP-Rule:MF_01342, ECO:0000256|RuleBase:RU004414}; TaxID=1121015 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas oryziterrae DSM 21050 = YC6267.;"
rplP; 50S ribosomal protein L16
BSR_Ace_UAPBR_inlet_p_131793_11
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4687..4872
DNA (186bp) protein (62aa)
50S ribosomal protein L29 n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WVG2_PSEUU
50S ribosomal protein L29
50S ribosomal protein L29 {ECO:0000256|HAMAP-Rule:MF_00374}; TaxID=345309 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Luteibacter.;" source="Luteibacter yeojuensis.;"
BSR_Ace_UAPBR_inlet_p_131793_12
Arenimonas composti, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4883..5146
DNA (264bp) protein (88aa)
30S ribosomal protein S17 n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WVG1_PSEUU
30S ribosomal protein S17 {ECO:0000256|HAMAP-Rule:MF_01345, ECO:0000256|RuleBase:RU003873}; TaxID=1121013 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas composti TR7-09 = DSM 18010.;"
30S ribosomal protein S17
BSR_Ace_UAPBR_inlet_p_131793_13
Lysobacter defluvii, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5165..5533
DNA (369bp) protein (123aa)
50S ribosomal protein L14 n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WVG0_PSEUU
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367, ECO:0000256|RuleBase:RU003950}; TaxID=1385515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter defluvii IMMIB APB-9 = DSM 18482.;"
50S ribosomal protein L14
BSR_Ace_UAPBR_inlet_p_131793_14
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5554..5868
DNA (315bp) protein (105aa)
50S ribosomal protein L24 n=1 Tax=Rhodanobacter denitrificans RepID=I4WKS4_9GAMM
ribosomal protein L24, bacterial/organelle
50S ribosomal protein L24 {ECO:0000256|HAMAP-Rule:MF_01326}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
BSR_Ace_UAPBR_inlet_p_131793_15
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5880..6419
DNA (540bp) protein (180aa)
50S ribosomal protein L5 id=2431991 bin=GWF1_Xanthomonadales_69_6 species=unknown genus=unknown taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
ribosomal protein L5
BSR_Ace_UAPBR_inlet_p_131793_16
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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6435..6740
DNA (306bp) protein (102aa)
30S ribosomal protein S14 n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WVF7_PSEUU
30S ribosomal protein S14
30S ribosomal protein S14 {ECO:0000256|HAMAP-Rule:MF_00537}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
BSR_Ace_UAPBR_inlet_p_131793_17
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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6864..7259
DNA (396bp) protein (132aa)
30S ribosomal protein S8 n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI0002F31DB3
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;"
30S ribosomal protein S8
BSR_Ace_UAPBR_inlet_p_131793_18
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

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7275..7802
DNA (528bp) protein (176aa)
50S ribosomal protein L6 n=3 Tax=Xanthomonas RepID=G2LUC0_9XANT
rplF; 50S ribosomal protein L6
Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
BSR_Ace_UAPBR_inlet_p_131793_19
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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7886..8239
DNA (354bp) protein (118aa)
50S ribosomal protein L18 n=1 Tax=Stenotrophomonas maltophilia D457 RepID=I0KJZ2_STEMA
rplR; 50S ribosomal protein L18
Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
BSR_Ace_UAPBR_inlet_p_131793_20
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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8380..8880
DNA (501bp) protein (167aa)
30S ribosomal protein S5 n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002F6F00D
30S ribosomal protein S5 {ECO:0000256|HAMAP-Rule:MF_01307, ECO:0000256|SAAS:SAAS00085406}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
30S ribosomal protein S5
BSR_Ace_UAPBR_inlet_p_131793_21
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


8873..9061
DNA (189bp) protein (63aa)
50S ribosomal protein L30 n=1 Tax=Stenotrophomonas maltophilia RepID=UPI000305A9D7
50S ribosomal protein L30
Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
BSR_Ace_UAPBR_inlet_p_131793_22
Arenimonas composti, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


9080..9517
DNA (438bp) protein (146aa)
50S ribosomal protein L15 n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI0002D2FDB2
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341, ECO:0000256|RuleBase:RU003889}; TaxID=1121013 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas composti TR7-09 = DSM 18010.;"
50S ribosomal protein L15
BSR_Ace_UAPBR_inlet_p_131793_23
BJP_IG2103_SUB10_Xanthomonadales_61_45, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


9522..10880
DNA (1359bp) protein (453aa)
Protein translocase subunit SecY id=2432000 bin=GWF1_Xanthomonadales_69_6 species=unknown genus=Stenotrophomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
secY; preprotein translocase subunit SecY
Tax=BJP_IG2103_SUB10_Xanthomonadales_61_45
BSR_Ace_UAPBR_inlet_p_131793_24
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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11082..11438
DNA (357bp) protein (119aa)
30S ribosomal protein S13 n=1 Tax=Xanthomonas gardneri ATCC 19865 RepID=F0C636_9XANT
SSU ribosomal protein S13P
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
BSR_Ace_UAPBR_inlet_p_131793_25
Arenimonas composti, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


11448..11837
DNA (390bp) protein (130aa)
30S ribosomal protein S11 n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B5D544
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=1121013 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas composti TR7-09 = DSM 18010.;"
30S ribosomal protein S11
BSR_Ace_UAPBR_inlet_p_131793_26
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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11851..12480
DNA (630bp) protein (210aa)
30S ribosomal protein S4 n=1 Tax=Xanthomonas RepID=UPI000262A374
30S ribosomal protein S4
Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
BSR_Ace_UAPBR_inlet_p_131793_27
Arenimonas composti, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12499..13497
DNA (999bp) protein (333aa)
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; TaxID=1121013 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas composti TR7-09 = DSM 18010.;"
DNA-directed RNA polymerase subunit alpha id=2432004 bin=GWF1_Xanthomonadales_69_6 species=unknown genus=unknown taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
DNA-directed RNA polymerase subunit alpha
BSR_Ace_UAPBR_inlet_p_131793_28

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13628..14017
DNA (390bp) protein (130aa)
Ribosomal protein L17 n=1 Tax=mine drainage metagenome RepID=T1C1Y4_9ZZZZ
Ribosomal protein L17 {ECO:0000313|EMBL:EQD60115.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
50S ribosomal protein L17
BSR_Ace_UAPBR_inlet_p_131793_29
Arenimonas metalli, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14147..14965)
DNA (819bp) protein (273aa)
suhB; inositol monophosphatase (EC:3.1.3.25)
Uncharacterized protein {ECO:0000313|EMBL:KFN41487.1}; TaxID=1384056 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas metalli CF5-1.;"
Probable inositol monophosphatase protein id=2489101 bin=GWF1_Xanthomonadales_69_6 species=unknown genus=Xanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
BSR_Ace_UAPBR_inlet_p_131793_30
Arenimonas oryziterrae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15134..15967
DNA (834bp) protein (278aa)
tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmJ {ECO:0000256|RuleBase:RU362024}; EC=2.1.1.200 {ECO:0000256|RuleBase:RU362024};; tRNA (cytidine(32)/uridine(32)-2'-O)-methyltransferase {ECO:0000256|RuleBase:RU362024}; tRNA Cm32/Um32 methyltransferase {ECO:0000256|RuleBase:RU362024}; TaxID=1121015 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas oryziterrae DSM 21050 = YC6267.;"
RNA methyltransferase n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B39715
TrmH family RNA methyltransferase
Displaying items 1-30 of 41 in total

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