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BSR_Ace_UAPBR_inlet_p_134881

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Displaying items 1-30 of 66 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BSR_Ace_UAPBR_inlet_p_134881_1
unknown

Not on your lists

comp(2..88)
DNA (87bp) protein (29aa)

This feature has no annotations

BSR_Ace_UAPBR_inlet_p_134881_2
Solemya velum gill symbiont, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(161..958)
DNA (798bp) protein (266aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI0003828279
Uncharacterized protein {ECO:0000313|EMBL:KHF25850.1}; TaxID=2340 species="Bacteria; Proteobacteria; Gammaproteobacteria; sulfur-oxidizing symbionts.;" source="Solemya velum gill symbiont.;"
conserved protein of unknown function(similar to ABC-type transport system protein)
BSR_Ace_UAPBR_inlet_p_134881_3
RLO_Gammaproteobacteria_47_11, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(962..1279)
DNA (318bp) protein (106aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00037F3AF4
anti-anti-sigma regulatory factor
Tax=RifCSPlowO2_12_Gammaproteobacteria_47_11_curated
BSR_Ace_UAPBR_inlet_p_134881_4
RIFOXYD12_FULL_Rhodospirillales_60_8_curated, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1276..2952)
DNA (1677bp) protein (559aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00037CD268
Serine phosphatase RsbU
Tax=RIFOXYD12_FULL_Rhodospirillales_60_8_curated
BSR_Ace_UAPBR_inlet_p_134881_5
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2949..3728)
DNA (780bp) protein (260aa)
phosphatidylserine synthase (EC:2.7.8.8)
CDP-diacylglycerol--serine O-phosphatidyltransferase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002EA6CC8
CDP-diacylglycerol-serine O-phosphatidyltransferase {ECO:0000313|EMBL:KGQ20820.1}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
BSR_Ace_UAPBR_inlet_p_134881_6
Marinobacter nanhaiticus, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3865..4269
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Marinobacter nanhaiticus D15-8W RepID=N6WXV3_9ALTE
Uncharacterized protein {ECO:0000313|EMBL:ENO16431.1}; TaxID=626887 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacter.;" source="Marinobacter nanhaiticus D15-8W.;"
hypothetical protein
BSR_Ace_UAPBR_inlet_p_134881_7
unknown

Not on your lists

4295..4576
DNA (282bp) protein (94aa)

This feature has no annotations

BSR_Ace_UAPBR_inlet_p_134881_8
GWF1_Xanthomonadales_69_6_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


4665..6368
DNA (1704bp) protein (568aa)
Proline--tRNA ligase id=2917430 bin=GWF1_Xanthomonadales_69_6 species=Pseudoxanthomonas suwonensis genus=Pseudoxanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
prolyl-tRNA synthetase
Tax=GWF1_Xanthomonadales_69_6_curated
BSR_Ace_UAPBR_inlet_p_134881_9
unknown

Not on your lists

comp(6438..7235)
DNA (798bp) protein (266aa)

This feature has no annotations

BSR_Ace_UAPBR_inlet_p_134881_10
Lysobacter concretionis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7704..8084
DNA (381bp) protein (127aa)
Histone family protein nucleoid-structuring protein H-NS n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WW59_PSEUU
DNA-binding protein {ECO:0000313|EMBL:KGM52954.1}; TaxID=1122185 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter concretionis Ko07 = DSM 16239.;"
histone family protein nucleoid-structuring protein H-NS
BSR_Ace_UAPBR_inlet_p_134881_11
BJP_08E140C01_Xanthomonadales_64_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8154..9386)
DNA (1233bp) protein (411aa)
hypothetical protein n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B441A3
hypothetical protein
Tax=BJP_08E140C01_Xanthomonadales_64_42
BSR_Ace_UAPBR_inlet_p_134881_12
Arenimonas oryziterrae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9533..10471
DNA (939bp) protein (313aa)
hypothetical protein n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B354BA
Uncharacterized protein {ECO:0000313|EMBL:KFN43631.1}; TaxID=1121015 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas oryziterrae DSM 21050 = YC6267.;"
hypothetical protein
BSR_Ace_UAPBR_inlet_p_134881_13
Arenimonas donghaensis, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10494..12344)
DNA (1851bp) protein (617aa)
Uncharacterized protein {ECO:0000313|EMBL:KFL35787.1}; TaxID=1121014 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas donghaensis DSM 18148 = HO3-R19.;"
Sulfur deprivation response regulator id=2960325 bin=GWF1_Xanthomonadales_69_6 species=unknown genus=Xanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
potassium transporter TrkA
BSR_Ace_UAPBR_inlet_p_134881_14
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12389..13111)
DNA (723bp) protein (241aa)
tRNA (guanine-N(7)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; EC=2.1.1.33 {ECO:0000256|HAMAP-Rule:MF_01057};; tRNA (guanine(46)-N(7))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; tRNA(m7G46)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis.;"
tRNA (guanine-N(7)-)-methyltransferase n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI00030A4A93
trmB; tRNA (guanine-N7-)-methyltransferase
BSR_Ace_UAPBR_inlet_p_134881_trna_1
unknown

Not on your lists

13259..13329
DNA (71bp)
transferRNA Gly
BSR_Ace_UAPBR_inlet_p_134881_15
Azospira oryzae, Azospira, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13352..14389)
DNA (1038bp) protein (346aa)
Fructose-1,6-bisphosphatase class 1 {ECO:0000256|HAMAP-Rule:MF_01855}; Short=FBPase class 1 {ECO:0000256|HAMAP-Rule:MF_01855};; EC=3.1.3.11 {ECO:0000256|HAMAP-Rule:MF_01855};; D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1 {ECO:0000256|HAMAP-Rule:MF_01855}; TaxID=640081 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azospira.;" source="Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) (Dechlorosoma; suillum).;"
Fructose-1,6-bisphosphatase class 1 n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QPP3_AZOSU
fructose-1,6-bisphosphatase
BSR_Ace_UAPBR_inlet_p_134881_16
Arenimonas composti, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14546..15685
DNA (1140bp) protein (380aa)
tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783}; EC=2.5.1.75 {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783};; Dimethylallyl diphosphate:tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; Isopentenyl-diphosphate:tRNA isopentenyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; TaxID=1121013 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas composti TR7-09 = DSM 18010.;"
tRNA delta(2)-isopentenylpyrophosphate transferase n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B3FE0C
tRNA delta(2)-isopentenylpyrophosphate transferase
BSR_Ace_UAPBR_inlet_p_134881_17
Arenimonas metalli, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15607..16932)
DNA (1326bp) protein (442aa)
membrane protein n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B37470
Uncharacterized protein {ECO:0000313|EMBL:KFN42745.1}; TaxID=1384056 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas metalli CF5-1.;"
membrane protein
BSR_Ace_UAPBR_inlet_p_134881_18
unknown

Not on your lists

17214..18344
DNA (1131bp) protein (377aa)

This feature has no annotations

BSR_Ace_UAPBR_inlet_p_134881_19
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18322..19269)
DNA (948bp) protein (316aa)
LysR family transcriptional regulator n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI00031A0BF5
Uncharacterized protein {ECO:0000313|EMBL:AKC85666.1}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis.;"
LysR family transcriptional regulator
BSR_Ace_UAPBR_inlet_p_134881_20
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19366..20574
DNA (1209bp) protein (403aa)
tryptophan synthase, beta chain (EC:4.2.1.20)
Tryptophan synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00133}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00133};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Tryptophan synthase beta chain n=2 Tax=Rhodanobacter denitrificans RepID=M4NCT4_9GAMM
BSR_Ace_UAPBR_inlet_p_134881_21
Frateuria aurantia, Frateuria, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20707..21507
DNA (801bp) protein (267aa)
Tryptophan synthase alpha chain {ECO:0000256|HAMAP-Rule:MF_00131, ECO:0000256|SAAS:SAAS00031177}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00131, ECO:0000256|SAAS:SAAS00108586};; TaxID=767434 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Frateuria.;" source="Frateuria aurantia (strain ATCC 33424 / DSM 6220 / NBRC 3245 / NCIMB; 13370) (Acetobacter aurantius).;"
Tryptophan synthase alpha chain n=1 Tax=Frateuria aurantia (strain ATCC 33424 / DSM 6220 / NBRC 3245 / NCIMB 13370) RepID=H8L1M7_FRAAD
tryptophan synthase subunit alpha
BSR_Ace_UAPBR_inlet_p_134881_22
Thioalkalivibrio thiocyanoxidans, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21525..22082)
DNA (558bp) protein (186aa)
Putative uncharacterized protein n=1 Tax=Thioalkalivibrio thiocyanoxidans ARh 4 RepID=G4DHK6_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHE98497.1}; TaxID=713587 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio thiocyanoxidans ARh 4.;"
BSR_Ace_UAPBR_inlet_p_134881_23
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22126..23496)
DNA (1371bp) protein (457aa)
cysteine synthase (EC:4.2.1.22)
cystathionine beta-synthase n=1 Tax=Dyella ginsengisoli RepID=UPI00034CF20B
Cysteine synthase {ECO:0000313|EMBL:EIL98536.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
BSR_Ace_UAPBR_inlet_p_134881_24
Arenimonas composti, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23677..24561)
DNA (885bp) protein (295aa)
Phenylalanine 4-monooxygenase {ECO:0000313|EMBL:KFN50706.1}; TaxID=1121013 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas composti TR7-09 = DSM 18010.;"
phenylalanine 4-monooxygenase id=2461082 bin=GWF1_Xanthomonadales_69_6 species=Xanthomonas sacchari genus=Xanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
Phenylalanine 4-hydroxylase
BSR_Ace_UAPBR_inlet_p_134881_25
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24686..25174
DNA (489bp) protein (163aa)
Transcriptional regulator, AsnC family n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WP07_PSEUU
AsnC family transcriptional regulator
Transcriptional regulator, AsnC family {ECO:0000313|EMBL:ADV25906.1}; TaxID=743721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis (strain 11-1).;"
BSR_Ace_UAPBR_inlet_p_134881_26
Xanthomonas oryzae, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25171..25896
DNA (726bp) protein (242aa)
pseudouridylate synthase n=1 Tax=Xanthomonas sp. M97 RepID=UPI0003A9A4F0
pseudouridylate synthase
Pseudouridylate synthases, 23S RNA-specific {ECO:0000313|EMBL:AAW73602.1}; TaxID=291331 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas oryzae pv. oryzae (strain KACC10331 / KXO85).;"
BSR_Ace_UAPBR_inlet_p_134881_27
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25913..26554
DNA (642bp) protein (214aa)
ECF-family RNA polymerase sigma factor n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9ENA8_SORC5
ECF family RNA polymerase sigma factor
ECF-family RNA polymerase sigma factor {ECO:0000313|EMBL:CAN90838.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
BSR_Ace_UAPBR_inlet_p_134881_28
Lysobacter concretionis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26560..27429
DNA (870bp) protein (290aa)
membrane protein n=1 Tax=Xanthomonas sp. SHU308 RepID=UPI000365A473
Membrane protein {ECO:0000313|EMBL:KGM52102.1}; TaxID=1122185 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter concretionis Ko07 = DSM 16239.;"
membrane protein
BSR_Ace_UAPBR_inlet_p_134881_29
GWF1_Xanthomonadales_69_6_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27572..28585
DNA (1014bp) protein (338aa)
gapA; glyceraldehyde-3-phosphate dehydrogenase (EC:1.2.1.12)
Glyceraldehyde-3-phosphate dehydrogenase, type I id=2894458 bin=GWF1_Xanthomonadales_69_6 species=Beggiatoa alba genus=Beggiatoa taxon_order=Thiotrichales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
Tax=GWF1_Xanthomonadales_69_6_curated
Displaying items 1-30 of 66 in total

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