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BSR_Ace_UAPBR_inlet_p_125908

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Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BSR_Ace_UAPBR_inlet_p_125908_1
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(149..1060)
DNA (912bp) protein (304aa)
dihydroorotate oxidase b, catalytic subunit (EC:1.3.98.1)
Dihydroorotate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00224}; Short=DHOD {ECO:0000256|HAMAP-Rule:MF_00224};; Short=DHODase {ECO:0000256|HAMAP-Rule:MF_00224};; Short=DHOdehase {ECO:0000256|HAMAP-Rule:MF_00224};; EC=1.3.-.- {ECO:0000256|HAMAP-Rule:MF_00224};; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
Dihydroorotate dehydrogenase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T2E8_PALPW
BSR_Ace_UAPBR_inlet_p_125908_2
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(1054..1812)
DNA (759bp) protein (253aa)
dihydroorotate oxidase b, electron transfer subunit (EC:1.3.98.1)
Dihydroorotate dehydrogenase B (NAD(+)), electron transfer subunit n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T2E9_PALPW
Dihydroorotate dehydrogenase B (NAD(+)), electron transfer subunit {ECO:0000256|HAMAP-Rule:MF_01211}; Dihydroorotate oxidase B, electron transfer subunit {ECO:0000256|HAMAP-Rule:MF_01211}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
BSR_Ace_UAPBR_inlet_p_125908_3
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(1899..2486)
DNA (588bp) protein (196aa)
Helix-turn-helix domain protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T2F0_PALPW
helix-turn-helix domain-containing protein
Helix-turn-helix domain protein {ECO:0000313|EMBL:ADQ78894.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
BSR_Ace_UAPBR_inlet_p_125908_4
unknown

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3279..3494
DNA (216bp) protein (72aa)

This feature has no annotations

BSR_Ace_UAPBR_inlet_p_125908_5
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(3441..4220)
DNA (780bp) protein (260aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T2F2_PALPW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ78896.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
BSR_Ace_UAPBR_inlet_p_125908_6
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(4225..5319)
DNA (1095bp) protein (365aa)
Putative GTP cyclohydrolase 1 type 2 {ECO:0000256|RuleBase:RU004385}; EC=3.5.4.16 {ECO:0000256|RuleBase:RU004385};; GTP cyclohydrolase I {ECO:0000256|RuleBase:RU004385}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
Putative GTP cyclohydrolase 1 type 2 n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T2F3_PALPW
hypothetical protein
BSR_Ace_UAPBR_inlet_p_125908_7
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(5357..5785)
DNA (429bp) protein (143aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T2F4_PALPW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ78898.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
BSR_Ace_UAPBR_inlet_p_125908_8
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(5803..7605)
DNA (1803bp) protein (601aa)
amidophosphoribosyltransferase (EC:2.4.2.14)
Amidophosphoribosyltransferase {ECO:0000313|EMBL:ADQ78953.1}; EC=2.4.2.14 {ECO:0000313|EMBL:ADQ78953.1};; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
Amidophosphoribosyltransferase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T2K9_PALPW
BSR_Ace_UAPBR_inlet_p_125908_9
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(7643..9484)
DNA (1842bp) protein (614aa)
glutamine--fructose-6-phosphate transaminase (EC:2.6.1.16)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] {ECO:0000256|HAMAP-Rule:MF_00164, ECO:0000256|SAAS:SAAS00039584}; EC=2.6.1.16 {ECO:0000256|HAMAP-Rule:MF_00164};; D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; GFAT {ECO:0000256|HAMAP-Rule:MF_00164}; Glucosamine-6-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00164}; Hexosephosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; L-glutamine--D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T2L0_PALPW
BSR_Ace_UAPBR_inlet_p_125908_10
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(9527..10753)
DNA (1227bp) protein (409aa)
lL-diaminopimelate aminotransferase apoenzyme (EC:2.6.1.83)
LL-diaminopimelate aminotransferase {ECO:0000256|HAMAP-Rule:MF_01642}; Short=DAP-AT {ECO:0000256|HAMAP-Rule:MF_01642};; Short=DAP-aminotransferase {ECO:0000256|HAMAP-Rule:MF_01642};; Short=LL-DAP-aminotransferase {ECO:0000256|HAMAP-Rule:MF_01642};; EC=2.6.1.83 {ECO:0000256|HAMAP-Rule:MF_01642};; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
LL-diaminopimelate aminotransferase id=2921998 bin=GWF2_Bacteroidetes_33_16 species=Paludibacter propionicigenes genus=Paludibacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_16 organism_group=Bacteroidetes organism_desc=Good
BSR_Ace_UAPBR_inlet_p_125908_11
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(10809..11795)
DNA (987bp) protein (329aa)
Quinone oxidoreductase, YhdH/YhfP family id=2921995 bin=GWF2_Bacteroidetes_33_16 species=Paludibacter propionicigenes genus=Paludibacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_16 organism_group=Bacteroidetes organism_desc=Good
quinone oxidoreductase, yhdh/yhfp family
Quinone oxidoreductase, YhdH/YhfP family {ECO:0000313|EMBL:ADQ78957.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
BSR_Ace_UAPBR_inlet_p_125908_12
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(11855..12214)
DNA (360bp) protein (120aa)
Putative uncharacterized protein id=2921990 bin=GWF2_Bacteroidetes_33_16 species=Paludibacter propionicigenes genus=Paludibacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_16 organism_group=Bacteroidetes organism_desc=Good
hypothetical protein
Tax=CG_Paludi_01
BSR_Ace_UAPBR_inlet_p_125908_13
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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12367..13317
DNA (951bp) protein (317aa)
FemAB family protein n=1 Tax=Sulfurovum sp. AR RepID=I2K7F9_9PROT
putative methicillin resistance protein
Tax=CG_Paludi_01
BSR_Ace_UAPBR_inlet_p_125908_14
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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13314..14294
DNA (981bp) protein (327aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=B7BCL1_9PORP
hypothetical protein
Tax=CG_Paludi_01
BSR_Ace_UAPBR_inlet_p_125908_15
Chryseobacterium formosense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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14365..15468
DNA (1104bp) protein (368aa)
Uncharacterized protein n=1 Tax=Bergeyella zoohelcum CCUG 30536 RepID=K1MXP8_9FLAO
Glycosyl transferase family 1 {ECO:0000313|EMBL:KFE98462.1}; TaxID=236814 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium formosense.;"
glycosyl transferase, group 1
BSR_Ace_UAPBR_inlet_p_125908_16
Enterococcus faecium, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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15461..16324
DNA (864bp) protein (288aa)
Uncharacterized protein n=1 Tax=Enterococcus faecium EnGen0263 RepID=R2M2T1_ENTFC
Uncharacterized protein {ECO:0000313|EMBL:EOH52848.1}; TaxID=1158553 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecium EnGen0263.;"
hypothetical protein
BSR_Ace_UAPBR_inlet_p_125908_17
Bacteroidetes oral taxon 274, Bacteroidetes, Bacteria

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16351..17577
DNA (1227bp) protein (409aa)
Polysaccharide biosynthesis protein n=1 Tax=Bacteroidetes oral taxon 274 str. F0058 RepID=D7JC03_9BACT
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:EFI16422.1}; TaxID=575590 species="Bacteria; Bacteroidetes.;" source="Bacteroidetes oral taxon 274 str. F0058.;"
O-antigen transporter
BSR_Ace_UAPBR_inlet_p_125908_18
RIFCSPLOWO2_12_FULL_Bacteroidetes_37_12_curated, Bacteroidetes, Bacteria

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17574..18353
DNA (780bp) protein (260aa)
Putative uncharacterized protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1XZZ9_9SPHI
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_37_12_curated
BSR_Ace_UAPBR_inlet_p_125908_19
Bacteroides sp. CAG:189, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(18475..19377)
DNA (903bp) protein (301aa)
Diaminopimelate dehydrogenase n=3 Tax=Bacteroides RepID=R0J5I2_9BACE
Diaminopimelate dehydrogenase {ECO:0000313|EMBL:CCY52545.1}; TaxID=1262737 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:189.;"
putative oxidoreductase
BSR_Ace_UAPBR_inlet_p_125908_20
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(19838..21691)
DNA (1854bp) protein (618aa)
UPF0313 protein Palpr_0620 n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T232_PALPW
radical SAM domain-containing protein
Tax=CG_Paludi_01
BSR_Ace_UAPBR_inlet_p_125908_21
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(21722..23182)
DNA (1461bp) protein (487aa)
Na+/H+ antiporter NhaC n=1 Tax=Bacteroides vulgatus dnLKV7 RepID=R9HCK2_BACVU
Na+/H+ antiporter NhaC {ECO:0000313|EMBL:EOS01531.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
sodium:proton antiporter
BSR_Ace_UAPBR_inlet_p_125908_22
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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23272..24144
DNA (873bp) protein (291aa)
Purine or other phosphorylase family 1 n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T1J0_PALPW
purine or other phosphorylase family 1
Purine or other phosphorylase family 1 {ECO:0000313|EMBL:ADQ78584.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
BSR_Ace_UAPBR_inlet_p_125908_23
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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24186..25580
DNA (1395bp) protein (465aa)
tRNA modification GTPase MnmE {ECO:0000256|HAMAP-Rule:MF_00379}; EC=3.6.-.- {ECO:0000256|HAMAP-Rule:MF_00379};; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
tRNA modification GTPase MnmE n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T1I9_PALPW
tRNA modification GTPase trme
BSR_Ace_UAPBR_inlet_p_125908_24
Bacteroidales bacterium CF, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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25605..26147
DNA (543bp) protein (181aa)
Putative ribosomal N-acetyltransferase YdaF {ECO:0000313|EMBL:AGY54559.1}; EC=1.1.1.25 {ECO:0000313|EMBL:AGY54559.1};; TaxID=1400053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales.;" source="Bacteroidales bacterium CF.;"
Putative ribosomal N-acetyltransferase YdaF n=1 Tax=Bacteroidales bacterium CF RepID=U5QB75_9BACT
hypothetical protein
BSR_Ace_UAPBR_inlet_p_125908_25
bacterium UASB14, Bacteria

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26144..26524
DNA (381bp) protein (127aa)
Uncharacterized protein {ECO:0000313|EMBL:GAK51586.1}; TaxID=1499966 species="Bacteria.;" source="bacterium UASB14.;"
hypothetical protein; K09790 hypothetical protein id=7200958 bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
hypothetical protein
BSR_Ace_UAPBR_inlet_p_125908_26
Barnesiella intestinihominis, Barnesiella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(26519..27067)
DNA (549bp) protein (183aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00037D4D03
Uncharacterized protein {ECO:0000313|EMBL:EJZ64498.1}; TaxID=742726 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Barnesiella.;" source="Barnesiella intestinihominis YIT 11860.;"
NAD(P)H nitroreductase
BSR_Ace_UAPBR_inlet_p_125908_27
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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27191..28498
DNA (1308bp) protein (436aa)
tRNA(Ile)-lysidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; EC=6.3.4.19 {ECO:0000256|HAMAP-Rule:MF_01161};; tRNA(Ile)-2-lysyl-cytidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; tRNA(Ile)-lysidine synthetase {ECO:0000256|HAMAP-Rule:MF_01161}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
tRNA(Ile)-lysidine synthase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T250_PALPW
tRNA(ile)-lysidine synthetase
BSR_Ace_UAPBR_inlet_p_125908_28
unknown

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comp(28783..28968)
DNA (186bp) protein (62aa)

This feature has no annotations

Displaying 28 items

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