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BSR_Ace_UAPBR_inlet_p_126661

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Displaying items 1-30 of 50 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BSR_Ace_UAPBR_inlet_p_126661_1
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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270..2348
DNA (2079bp) protein (693aa)
DNA ligase, nad-dependent (EC:6.5.1.2)
DNA ligase {ECO:0000256|HAMAP-Rule:MF_01588}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01588};; Polydeoxyribonucleotide synthase [NAD(+)] {ECO:0000256|HAMAP-Rule:MF_01588}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
DNA ligase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T3B7_PALPW
BSR_Ace_UAPBR_inlet_p_126661_2
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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2358..2924
DNA (567bp) protein (189aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T3B6_PALPW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ79210.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
BSR_Ace_UAPBR_inlet_p_126661_3
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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2961..3842
DNA (882bp) protein (294aa)
dihydrodipicolinate synthase (EC:4.2.1.52)
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086366}; Short=HTPA synthase {ECO:0000256|HAMAP-Rule:MF_00418};; EC=4.3.3.7 {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086421};; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
4-hydroxy-tetrahydrodipicolinate synthase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T3B5_PALPW
BSR_Ace_UAPBR_inlet_p_126661_4
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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3950..7453
DNA (3504bp) protein (1168aa)
delta-1-pyrroline-5-carboxylate dehydrogenase/L-proline dehydrogenase (EC:1.5.1.12 1.5.99.8)
Delta-1-pyrroline-5-carboxylate dehydrogenase L-proline dehydrogenase {ECO:0000313|EMBL:ADQ79150.1}; EC=1.2.1.88 {ECO:0000313|EMBL:ADQ79150.1};; EC=1.5.99.8 {ECO:0000313|EMBL:ADQ79150.1};; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
Delta-1-pyrroline-5-carboxylate dehydrogenase; L-proline dehydrogenase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T356_PALPW
BSR_Ace_UAPBR_inlet_p_126661_5
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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7431..8390
DNA (960bp) protein (320aa)
2-dehydropantoate 2-reductase (EC:1.1.1.169)
2-dehydropantoate 2-reductase {ECO:0000256|RuleBase:RU003776}; EC=1.1.1.169 {ECO:0000256|RuleBase:RU003776};; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
2-dehydropantoate 2-reductase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T360_PALPW
BSR_Ace_UAPBR_inlet_p_126661_6
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(8381..9802)
DNA (1422bp) protein (474aa)
Polynucleotide adenylyltransferase/metal dependent phosphohydrolase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T082_PALPW
polynucleotide adenylyltransferase/metal dependent phosphohydrolase
Polynucleotide adenylyltransferase/metal dependent phosphohydrolase {ECO:0000313|EMBL:ADQ78272.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
BSR_Ace_UAPBR_inlet_p_126661_7
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(9858..11150)
DNA (1293bp) protein (431aa)
ATP synthase F1 subcomplex epsilon subunit n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T086_PALPW
ATP synthase F1 subunit epsilon
ATP synthase F1 subcomplex epsilon subunit {ECO:0000313|EMBL:ADQ78276.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
BSR_Ace_UAPBR_inlet_p_126661_8
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(11219..12463)
DNA (1245bp) protein (415aa)
(1->4)-alpha-D-glucan synthase (ADP-glucose) n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T087_PALPW
(1->4)-alpha-d-glucan synthase
Tax=CG_Paludi_01
BSR_Ace_UAPBR_inlet_p_126661_9
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(12479..14419)
DNA (1941bp) protein (647aa)
Amylo-alpha-16-glucosidase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T088_PALPW
amylO-alpha-16-glucosidase
Amylo-alpha-16-glucosidase {ECO:0000313|EMBL:ADQ78278.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
BSR_Ace_UAPBR_inlet_p_126661_10
unknown

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comp(14416..14505)
DNA (90bp) protein (30aa)

This feature has no annotations

BSR_Ace_UAPBR_inlet_p_126661_11
Geofilum rubicundum, Geofilum, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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14701..16377
DNA (1677bp) protein (559aa)
Uncharacterized protein {ECO:0000313|EMBL:GAO31644.1}; TaxID=1236989 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Marinilabiliaceae; Geofilum.;" source="Geofilum rubicundum JCM 15548.;"
Putative uncharacterized protein id=3804437 bin=GWF2_Bacteroidetes_33_38 species=Fluviicola taffensis genus=Fluviicola taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_38 organism_group=Bacteroidetes organism_desc=a699
BSR_Ace_UAPBR_inlet_p_126661_trna_1
unknown

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16567..16639
DNA (73bp)
transferRNA Thr
BSR_Ace_UAPBR_inlet_p_126661_12
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(16642..17865)
DNA (1224bp) protein (408aa)
isocitrate dehydrogenase (nadp) (EC:1.1.1.42)
Isocitrate dehydrogenase [NADP] n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T399_PALPW
Tax=CG_Paludi_01
BSR_Ace_UAPBR_inlet_p_126661_13
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(17971..19332)
DNA (1362bp) protein (454aa)
Citrate synthase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T397_PALPW
citrate synthase
Tax=CG_Paludi_01
BSR_Ace_UAPBR_inlet_p_126661_14
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19357..21612)
DNA (2256bp) protein (752aa)
aconitase (EC:4.2.1.3)
Aconitase {ECO:0000313|EMBL:ADQ79190.1}; EC=4.2.1.3 {ECO:0000313|EMBL:ADQ79190.1};; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
Aconitase id=2058389 bin=GWE2_Gammaproteobacteria_37_16 species=Paludibacter propionicigenes genus=Paludibacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Gammaproteobacteria_37_16 organism_group=Gammaproteobacteria organism_desc=Looks good, but small
BSR_Ace_UAPBR_inlet_p_126661_15
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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21875..23533
DNA (1659bp) protein (553aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
PAS/PAC sensor signal transduction histidine kinase id=2058392 bin=GWE2_Gammaproteobacteria_37_16 species=Paludibacter propionicigenes genus=Paludibacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Gammaproteobacteria_37_16 organism_group=Gammaproteobacteria organism_desc=Looks good, but small
pas/pac sensor signal transduction histidine kinase
BSR_Ace_UAPBR_inlet_p_126661_16
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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23549..23980
DNA (432bp) protein (144aa)
Response regulator receiver protein id=2058394 bin=GWE2_Gammaproteobacteria_37_16 species=Paludibacter propionicigenes genus=Paludibacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Gammaproteobacteria_37_16 organism_group=Gammaproteobacteria organism_desc=Looks good, but small
response regulator receiver protein
Response regulator receiver protein {ECO:0000313|EMBL:ADQ80303.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
BSR_Ace_UAPBR_inlet_p_126661_17
RBG_13_Chloroflexi_52_14_curated, Chloroflexi, Bacteria

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23982..26204
DNA (2223bp) protein (741aa)
multi-sensor hybrid histidine kinase (EC:2.7.13.3)
Multi-sensor hybrid histidine kinase n=1 Tax=Thiocapsa marina 5811 RepID=F9UBN1_9GAMM
Tax=RBG_13_Chloroflexi_52_14_curated
BSR_Ace_UAPBR_inlet_p_126661_18
Bacteroides coprosuis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(26249..26794)
DNA (546bp) protein (182aa)
MscS Mechanosensitive ion channel n=1 Tax=Bacteroides coprosuis DSM 18011 RepID=F3ZUJ4_9BACE
MscS Mechanosensitive ion channel {ECO:0000313|EMBL:EGJ71159.1}; TaxID=679937 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides coprosuis DSM 18011.;"
hypothetical protein
BSR_Ace_UAPBR_inlet_p_126661_19
BJP_IG2102_Bacteroidetes_40_12, Bacteroidetes, Bacteria

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comp(26939..27760)
DNA (822bp) protein (274aa)
Uncharacterized protein id=4434221 bin=GWF2_Bacteroidetes_41_61 species=Flavobacterium sp. CF136 genus=Flavobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_61 organism_group=Bacteroidetes organism_desc=a118
hypothetical protein
Tax=BJP_IG2102_Bacteroidetes_40_12
BSR_Ace_UAPBR_inlet_p_126661_20
GWF2_Bacteroidetes_38_335_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(27774..30095)
DNA (2322bp) protein (774aa)
TonB-dependent receptor id=3853758 bin=GWF2_Bacteroidetes_38_335 species=Paludibacter propionicigenes genus=Paludibacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_38_335 organism_group=Bacteroidetes organism_desc=a11
TonB-dependent receptor
Tax=GWF2_Bacteroidetes_38_335_curated
BSR_Ace_UAPBR_inlet_p_126661_21
Polaribacter irgensii, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(30120..30341)
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Polaribacter irgensii 23-P RepID=A4BWF6_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EAR13297.1}; TaxID=313594 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Polaribacter.;" source="Polaribacter irgensii 23-P.;"
hypothetical protein
BSR_Ace_UAPBR_inlet_p_126661_22
Polaribacter irgensii, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(30603..31994)
DNA (1392bp) protein (464aa)
Regulator protein pilR id=1789557 bin=GWE2_Bacteroidetes_42_24 species=Polaribacter irgensii genus=Polaribacter taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_24 organism_group=Bacteroidetes
Regulator protein pilR {ECO:0000313|EMBL:EAR13294.1}; TaxID=313594 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Polaribacter.;" source="Polaribacter irgensii 23-P.;"
Fis family two component sigma-54 specific transcriptional regulator
BSR_Ace_UAPBR_inlet_p_126661_23
GWF2_Bacteroidetes_43_11_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(31984..33576)
DNA (1593bp) protein (531aa)
Sensory box sensor histidine kinase n=2 Tax=Polaribacter RepID=A4BWF2_9FLAO
PAS/PAC sensor signal transduction histidine kinase
Tax=GWF2_Bacteroidetes_43_11_curated
BSR_Ace_UAPBR_inlet_p_126661_24
GWF2_Bacteroidetes_40_14_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(33605..35314)
DNA (1710bp) protein (570aa)
PAS/PAC sensor hybrid histidine kinase (EC:2.7.3.-)
Multi-sensor signal transduction histidine kinase id=2916495 bin=GWF2_Bacteroidetes_40_14 species=ACD79 genus=ACD79 taxon_order=ACD79 taxon_class=ACD79 phylum=Clamydiae tax=GWF2_Bacteroidetes_40_14 organism_group=Bacteroidetes
Tax=GWF2_Bacteroidetes_40_14_curated
BSR_Ace_UAPBR_inlet_p_126661_25
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(35326..37908)
DNA (2583bp) protein (861aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
Multi-sensor hybrid histidine kinase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T6G2_PALPW
multi-sensor hybrid histidine kinase
BSR_Ace_UAPBR_inlet_p_126661_26
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(37928..38755)
DNA (828bp) protein (276aa)
mcp methyltransferase, cher-type (EC:2.1.1.80)
MCP methyltransferase, CheR-type {ECO:0000313|EMBL:ADQ80305.1}; EC=2.1.1.80 {ECO:0000313|EMBL:ADQ80305.1};; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
MCP methyltransferase, CheR-type n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T6G1_PALPW
BSR_Ace_UAPBR_inlet_p_126661_27
Kordia algicida, Kordia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(38815..39978)
DNA (1164bp) protein (388aa)
Lycopene cyclase n=1 Tax=Kordia algicida OT-1 RepID=A9E5I6_9FLAO
Lycopene cyclase {ECO:0000313|EMBL:EDP95185.1}; TaxID=391587 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Kordia.;" source="Kordia algicida OT-1.;"
lycopene cyclase
BSR_Ace_UAPBR_inlet_p_126661_28
Saccharicrinis fermentans, Saccharicrinis, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(40107..40493)
DNA (387bp) protein (129aa)
Sporulation initiation phosphotransferase F {ECO:0000313|EMBL:GAF04282.1}; TaxID=869213 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Marinilabiliaceae; Saccharicrinis.;" source="Saccharicrinis fermentans DSM 9555 = JCM 21142.;"
Response regulator receiver domain protein id=2170553 bin=GWB2_Bacteroidetes_32_14 species=Leptospira meyeri genus=Leptospira taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB2_Bacteroidetes_32_14 organism_group=Bacteroidetes organism_desc=a47
putative two-component response regulator
BSR_Ace_UAPBR_inlet_p_126661_29
Saccharicrinis fermentans, Saccharicrinis, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(40495..41589)
DNA (1095bp) protein (365aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=869213 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Marinilabiliaceae; Saccharicrinis.;" source="Saccharicrinis fermentans DSM 9555 = JCM 21142.;"
Multi-sensor signal transduction histidine kinase id=1806284 bin=GWB2_Bacteroidetes_32_14 species=Oscillatoria nigro-viridis genus=Oscillatoria taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=GWB2_Bacteroidetes_32_14 organism_group=Bacteroidetes organism_desc=a47
two component response regulator sensor histidine kinase subunit
Displaying items 1-30 of 50 in total

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