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BSR_Ace_UAPBR_inlet_p_97228

Search features with annotation key words

Displaying items 1-30 of 76 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BSR_Ace_UAPBR_inlet_p_97228_1
Cellulophaga lytica, Cellulophaga, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(3..407)
DNA (405bp) protein (135aa)
Helicase domain protein n=1 Tax=Cellulophaga lytica (strain ATCC 23178 / DSM 7489 / JCM 8516 / NBRC 14961 / NCIMB 1423 / VKM B-1433 / Cy l20) RepID=F0RGZ6_CELLC
helicase domain-containing protein
Helicase domain protein {ECO:0000313|EMBL:ADY30200.1}; TaxID=867900 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Cellulophaga.;" source="Cellulophaga lytica (strain ATCC 23178 / DSM 7489 / JCM 8516 / NBRC; 14961 / NCIMB 1423 / VKM B-1433 / Cy l20).;"
BSR_Ace_UAPBR_inlet_p_97228_2
Bacteroides sp. D2, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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676..1242
DNA (567bp) protein (189aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. D2 RepID=E5CB48_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EFS31897.1}; TaxID=556259 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D2.;"
btr_5; HTH-type transcriptional activator Btr
BSR_Ace_UAPBR_inlet_p_97228_3
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(1444..2481)
DNA (1038bp) protein (346aa)
Uncharacterized protein n=2 Tax=Bacteria RepID=I8ZDV9_BACVU
Uncharacterized protein {ECO:0000313|EMBL:EIY73675.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
peptidoglycan domain protein
BSR_Ace_UAPBR_inlet_p_97228_4
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(2485..2733)
DNA (249bp) protein (83aa)
Uncharacterized protein n=1 Tax=Bacteroides stercoris CC31F RepID=S3YGU7_BACSE
Uncharacterized protein {ECO:0000313|EMBL:EPH20837.1}; TaxID=1073351 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris CC31F.;"
BSR_Ace_UAPBR_inlet_p_97228_5
Treponema socranskii, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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comp(2737..3429)
DNA (693bp) protein (231aa)
Uncharacterized protein n=1 Tax=Treponema socranskii subsp. paredis ATCC 35535 RepID=S3JKX5_TRESO
Uncharacterized protein {ECO:0000313|EMBL:EPF25675.1}; TaxID=1125701 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema socranskii subsp. paredis ATCC 35535.;"
hypothetical protein
BSR_Ace_UAPBR_inlet_p_97228_6
unknown

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3446..3661
DNA (216bp) protein (72aa)

This feature has no annotations

BSR_Ace_UAPBR_inlet_p_97228_7
Mucinivorans hirudinis, Mucinivorans, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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3908..4996
DNA (1089bp) protein (363aa)
Enoyl-[acyl-carrier-protein] reductase (FMN) {ECO:0000313|EMBL:CDN32480.1}; EC=1.3.1.9 {ECO:0000313|EMBL:CDN32480.1};; TaxID=1433126 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Mucinivorans.;" source="Mucinivorans hirudinis.;"
2-nitropropane dioxygenase n=1 Tax=Bacteroidales bacterium CF RepID=U5Q9J3_9BACT
hypothetical protein
BSR_Ace_UAPBR_inlet_p_97228_8
Prevotella buccae, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5093..6217
DNA (1125bp) protein (375aa)
DEAD/DEAH box helicase {ECO:0000313|EMBL:EFU31291.1}; EC=3.6.1.- {ECO:0000313|EMBL:EFU31291.1};; TaxID=873513 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella buccae ATCC 33574.;"
hypothetical protein n=1 Tax=Prevotella paludivivens RepID=UPI00036A81CD
ATP-dependent RNA helicase RhlE
BSR_Ace_UAPBR_inlet_p_97228_9
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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6241..6681
DNA (441bp) protein (147aa)
Cold shock protein n=1 Tax=Alistipes finegoldii CAG:68 RepID=R5UJT5_9BACT
Cold shock protein {ECO:0000313|EMBL:CCZ75984.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
cold shock protein
BSR_Ace_UAPBR_inlet_p_97228_10
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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6714..7022
DNA (309bp) protein (103aa)
RNA-binding protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI000319CE39
RNA-binding proteins (RRM domain) {ECO:0000313|EMBL:CDD25444.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
RNA-binding proteins (RRM domain)
BSR_Ace_UAPBR_inlet_p_97228_11

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comp(7086..7514)
DNA (429bp) protein (143aa)
Fe-S metabolism associated domain protein n=1 Tax=gut metagenome RepID=J9GC18_9ZZZZ
Fe-S metabolism associated domain protein {ECO:0000313|EMBL:EJX04877.1}; TaxID=749906 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="gut metagenome.;"
hypothetical protein
BSR_Ace_UAPBR_inlet_p_97228_12
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7667..8914)
DNA (1248bp) protein (416aa)
cysteine desulfurase, sufs subfamily (EC:4.4.1.16)
Cysteine desulfurase, SufS subfamily n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T3V0_PALPW
Tax=CG_Paludi_01
BSR_Ace_UAPBR_inlet_p_97228_13
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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9143..11632
DNA (2490bp) protein (830aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T3U9_PALPW
hypothetical protein
Tax=CG_Paludi_01
BSR_Ace_UAPBR_inlet_p_97228_14
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11705..12583
DNA (879bp) protein (293aa)
Cell division protein FtsX n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T3U8_PALPW
hypothetical protein
Cell division protein FtsX {ECO:0000256|PIRNR:PIRNR003097}; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
BSR_Ace_UAPBR_inlet_p_97228_15
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12755..12982
DNA (228bp) protein (76aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T3U7_PALPW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ79391.1}; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
BSR_Ace_UAPBR_inlet_p_97228_16
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12979..13773
DNA (795bp) protein (265aa)
undecaprenyl-diphosphatase (EC:3.6.1.27)
Undecaprenyl-diphosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; EC=3.6.1.27 {ECO:0000256|HAMAP-Rule:MF_01006};; Bacitracin resistance protein {ECO:0000256|HAMAP-Rule:MF_01006}; Undecaprenyl pyrophosphate phosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
Undecaprenyl-diphosphatase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T3U6_PALPW
BSR_Ace_UAPBR_inlet_p_97228_17
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13893..19958
DNA (6066bp) protein (2022aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T6G6_PALPW
hypothetical protein
Tax=CG_Paludi_01
BSR_Ace_UAPBR_inlet_p_97228_18
unknown

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comp(20314..20676)
DNA (363bp) protein (121aa)

This feature has no annotations

BSR_Ace_UAPBR_inlet_p_97228_19
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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20681..21415
DNA (735bp) protein (245aa)
tRNA pseudouridine synthase b (EC:4.2.1.70)
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylate synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA-uridine isomerase {ECO:0000256|HAMAP-Rule:MF_01080}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
tRNA pseudouridine synthase B n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T3U5_PALPW
BSR_Ace_UAPBR_inlet_p_97228_20
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21420..22469
DNA (1050bp) protein (350aa)
S-adenosylmethionine:tRNA ribosyltransferase-isomerase {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094456}; EC=2.4.99.17 {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094434};; Queuosine biosynthesis protein QueA {ECO:0000256|HAMAP-Rule:MF_00113}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
S-adenosylmethionine:tRNA ribosyltransferase-isomerase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T3U4_PALPW
s-adenosylmethionine/tRNA-ribosyltransferase isomerase
BSR_Ace_UAPBR_inlet_p_97228_21
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22637..23197)
DNA (561bp) protein (187aa)
Ribosome-recycling factor n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T7C6_PALPW
ribosome recycling factor
Ribosome-recycling factor {ECO:0000256|HAMAP-Rule:MF_00040}; Short=RRF {ECO:0000256|HAMAP-Rule:MF_00040};; Ribosome-releasing factor {ECO:0000256|HAMAP-Rule:MF_00040}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
BSR_Ace_UAPBR_inlet_p_97228_22
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23407..24114)
DNA (708bp) protein (236aa)
uridylate kinase (EC:2.7.4.22)
Uridylate kinase {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197273}; Short=UK {ECO:0000256|HAMAP-Rule:MF_01220};; EC=2.7.4.22 {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197270};; Uridine monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_01220}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
Uridylate kinase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T7C5_PALPW
BSR_Ace_UAPBR_inlet_p_97228_23
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24277..24741
DNA (465bp) protein (155aa)
enoyl-CoA hydratase (EC:4.2.1.17)
Acyl dehydratase n=2 Tax=Porphyromonadaceae RepID=U5CJB7_9PORP
Tax=CG_Paludi_01
BSR_Ace_UAPBR_inlet_p_97228_24
unknown

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comp(24808..24900)
DNA (93bp) protein (31aa)

This feature has no annotations

BSR_Ace_UAPBR_inlet_p_97228_25
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24931..26847
DNA (1917bp) protein (639aa)
Chaperone protein DnaK n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T825_PALPW
chaperone protein dnak
Tax=CG_Paludi_01
BSR_Ace_UAPBR_inlet_p_97228_26
Mangrovimonas yunxiaonensis, Mangrovimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(27045..27413)
DNA (369bp) protein (123aa)
Endonuclease n=1 Tax=Kordia algicida OT-1 RepID=A9EAI8_9FLAO
Excinuclease ABC subunit C {ECO:0000313|EMBL:KFB01223.1}; TaxID=1197477 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Mangrovimonas.;" source="Mangrovimonas yunxiaonensis.;"
excinuclease ABC subunit C
BSR_Ace_UAPBR_inlet_p_97228_trna_1
unknown

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comp(27604..27677)
DNA (74bp)
transferRNA Ala
BSR_Ace_UAPBR_inlet_p_97228_27
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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27769..28074
DNA (306bp) protein (102aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T3V3_PALPW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ79397.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
BSR_Ace_UAPBR_inlet_p_97228_28
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28071..28649
DNA (579bp) protein (193aa)
crossover junction endodeoxyribonuclease ruvc (EC:3.1.22.4)
Crossover junction endodeoxyribonuclease RuvC n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T3V2_PALPW
Tax=CG_Paludi_01
BSR_Ace_UAPBR_inlet_p_97228_29
unknown

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comp(28630..30558)
DNA (1929bp) protein (643aa)

This feature has no annotations

Displaying items 1-30 of 76 in total

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