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BSR_Ace_UAPBR_inlet_p_95430

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BSR_Ace_UAPBR_inlet_p_95430_1
Thermoanaerobacter italicus, Thermoanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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comp(3..686)
DNA (684bp) protein (228aa)
Integrase family protein n=1 Tax=Thermoanaerobacter italicus (strain DSM 9252 / Ab9) RepID=D3T4H1_THEIA
integrase
Integrase family protein {ECO:0000313|EMBL:ADD03123.1}; TaxID=580331 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Thermoanaerobacter.;" source="Thermoanaerobacter italicus (strain DSM 9252 / Ab9).;"
BSR_Ace_UAPBR_inlet_p_95430_2
Alkaliphilus metalliredigens, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

842..1786
DNA (945bp) protein (315aa)
D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TVU1_ALKMQ
D-isomer specific 2-hydroxyacid dehydrogenase
D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding {ECO:0000313|EMBL:ABR50309.1}; TaxID=293826 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus metalliredigens (strain QYMF).;"
BSR_Ace_UAPBR_inlet_p_95430_3
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(1920..2174)
DNA (255bp) protein (85aa)
id=2125485 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
Tax=GWF2_RBX1_38_17_curated
BSR_Ace_UAPBR_inlet_p_95430_4
unknown

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2348..3046
DNA (699bp) protein (233aa)

This feature has no annotations

BSR_Ace_UAPBR_inlet_p_95430_5
[Clostridium] sticklandii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3108..4049)
DNA (942bp) protein (314aa)
Cation diffusion facilitator family transporter n=1 Tax=Clostridium sticklandii (strain ATCC 12662 / DSM 519 / JCM 1433 / NCIB 10654) RepID=E3PRP0_CLOSD
Cation diffusion facilitator family transporter (fragment)
Cation diffusion facilitator family transporter {ECO:0000313|EMBL:CBH21544.1}; TaxID=499177 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sticklandii (strain ATCC 12662 / DSM 519 / JCM 1433 / NCIB; 10654).;"
BSR_Ace_UAPBR_inlet_p_95430_6
[Clostridium] litorale, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4277..4996
DNA (720bp) protein (240aa)
PhoB family transcriptional regulator n=1 Tax=Bacillus sp. 105MF RepID=UPI00036FEBCE
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:KDR95000.1}; TaxID=1121324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] litorale DSM 5388.;"
two component transcriptional regulator
BSR_Ace_UAPBR_inlet_p_95430_7
[Clostridium] termitidis, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4993..6885
DNA (1893bp) protein (631aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1195236 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] termitidis CT1112.;"
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Clostridium termitidis CT1112 RepID=S0FFH4_9CLOT
sensor histidine kinase
BSR_Ace_UAPBR_inlet_p_95430_8
Peptoniphilus sp. oral taxon 375, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

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7052..7234
DNA (183bp) protein (61aa)
Putative lipoprotein n=1 Tax=Peptoniphilus sp. oral taxon 375 str. F0436 RepID=F9MSS6_9FIRM
Putative lipoprotein {ECO:0000313|EMBL:EGS29714.1}; TaxID=879308 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus sp. oral taxon 375 str. F0436.;"
protein of unknown function DUF1858
BSR_Ace_UAPBR_inlet_p_95430_9
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7347..7577)
DNA (231bp) protein (77aa)
Glutaredoxin n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CUC5_9CLOT
Glutaredoxin {ECO:0000313|EMBL:EOD00279.1}; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacter kiritimatiensis.;"
glutaredoxin
BSR_Ace_UAPBR_inlet_p_95430_10
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7650..7880)
DNA (231bp) protein (77aa)
Glutaredoxin n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CUC5_9CLOT
Glutaredoxin {ECO:0000313|EMBL:EOD00279.1}; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacter kiritimatiensis.;"
glutaredoxin
BSR_Ace_UAPBR_inlet_p_95430_11
Clostridium sp. ASF356, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9098..9958
DNA (861bp) protein (287aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ASF356 RepID=N1Z6D5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EMZ11376.1}; TaxID=97138 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF356.;"
TraX protein
BSR_Ace_UAPBR_inlet_p_95430_12
Gottschalkia acidurici, Gottschalkia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10138..11001)
DNA (864bp) protein (288aa)
Ribosomal RNA small subunit methyltransferase A {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015019}; EC=2.1.1.182 {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015085};; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethyladenosine transferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethylase {ECO:0000256|HAMAP-Rule:MF_00607}; S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; TaxID=1128398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Gottschalkia.;" source="Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a).;"
Ribosomal RNA small subunit methyltransferase A n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0AWQ2_CLOA9
ksgA; dimethyladenosine transferase KsgA
BSR_Ace_UAPBR_inlet_p_95430_13
[Clostridium] hiranonis, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10985..11545)
DNA (561bp) protein (187aa)
Ribonuclease M5 {ECO:0000256|HAMAP-Rule:MF_01469}; EC=3.1.26.8 {ECO:0000256|HAMAP-Rule:MF_01469};; RNase M5 {ECO:0000256|HAMAP-Rule:MF_01469}; Ribosomal RNA terminal maturase M5 {ECO:0000256|HAMAP-Rule:MF_01469}; TaxID=500633 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] hiranonis DSM 13275.;"
Ribonuclease M5 n=1 Tax=Clostridium hiranonis DSM 13275 RepID=B6G0I7_9FIRM
putative DNA-binding protein
BSR_Ace_UAPBR_inlet_p_95430_14
Gottschalkia acidurici, Gottschalkia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11578..12348)
DNA (771bp) protein (257aa)
Deoxyribonuclease, TatD Mg-dependent n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0ATM3_CLOA9
deoxyribonuclease, TatD Mg-dependent
Deoxyribonuclease, TatD Mg-dependent {ECO:0000313|EMBL:AFS77203.1}; TaxID=1128398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Gottschalkia.;" source="Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a).;"
BSR_Ace_UAPBR_inlet_p_95430_15
unknown

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comp(12364..12873)
DNA (510bp) protein (170aa)

This feature has no annotations

BSR_Ace_UAPBR_inlet_p_95430_16
unknown

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comp(12885..13382)
DNA (498bp) protein (166aa)

This feature has no annotations

BSR_Ace_UAPBR_inlet_p_95430_17
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13415..15460)
DNA (2046bp) protein (682aa)
Methionine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00252424}; EC=6.1.1.10 {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00252424};; Methionyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01228}; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaerobacter.;" source="Caloranaerobacter azorensis H53214.;"
Methionine--tRNA ligase n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CE24_9CLOT
methionyl-tRNA synthetase
BSR_Ace_UAPBR_inlet_p_95430_18
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15910..17388)
DNA (1479bp) protein (493aa)
tRNA nucleotidyltransferase, CC-adding n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1AV69_9CLOT
Polynucleotide adenylyltransferase {ECO:0000313|EMBL:KGG80881.1}; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaerobacter.;" source="Caloranaerobacter azorensis H53214.;"
polynucleotide adenylyltransferase/metal dependent phosphohydrolase
BSR_Ace_UAPBR_inlet_p_95430_19
Gottschalkia acidurici, Gottschalkia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17763..18014
DNA (252bp) protein (84aa)
Transcription regulator n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0AVA2_CLOA9
abrB1; transcriptional regulator
Transcription regulator {ECO:0000313|EMBL:AFS77199.1}; TaxID=1128398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Gottschalkia.;" source="Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a).;"
BSR_Ace_UAPBR_inlet_p_95430_20
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18111..18950)
DNA (840bp) protein (280aa)
uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase (EC:2.1.1.-)
Ribosomal RNA small subunit methyltransferase I {ECO:0000256|HAMAP-Rule:MF_01877}; EC=2.1.1.198 {ECO:0000256|HAMAP-Rule:MF_01877};; 16S rRNA 2'-O-ribose C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01877}; rRNA (cytidine-2'-O-)-methyltransferase RsmI {ECO:0000256|HAMAP-Rule:MF_01877}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;"
Ribosomal RNA small subunit methyltransferase I n=1 Tax=Clostridium ultunense Esp RepID=M1Z5F1_9CLOT
BSR_Ace_UAPBR_inlet_p_95430_21
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18950..19417)
DNA (468bp) protein (156aa)
Methyltransferase small n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1AWQ5_9CLOT
Methyltransferase small {ECO:0000313|EMBL:EOD01062.1}; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacter kiritimatiensis.;"
methyltransferase small
Displaying 21 items

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