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BSR_Ace_UAPBR_inlet_p_2_38018

Search features with annotation key words

Displaying items 1-30 of 100 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BSR_Ace_UAPBR_inlet_p_2_38018_1
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..462)
DNA (462bp) protein (154aa)
LamB/YcsF family protein n=1 Tax=Nitratireductor indicus C115 RepID=K2NUW2_9RHIZ
LamB/YcsF family protein
LamB/YcsF family protein {ECO:0000313|EMBL:EKF41614.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
BSR_Ace_UAPBR_inlet_p_2_38018_2
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(459..1964)
DNA (1506bp) protein (502aa)
Tricarboxylate transporter family protein n=1 Tax=Nitratireductor indicus C115 RepID=K2P2Q6_9RHIZ
Tricarboxylate transporter family protein {ECO:0000313|EMBL:EKF41616.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
Tricarboxylate transporter family protein
BSR_Ace_UAPBR_inlet_p_2_38018_3
unknown

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comp(1972..2385)
DNA (414bp) protein (138aa)

This feature has no annotations

BSR_Ace_UAPBR_inlet_p_2_38018_4
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2425..3360)
DNA (936bp) protein (312aa)
Tricarboxylate transporter family protein n=1 Tax=Nitratireductor indicus C115 RepID=K2N2J4_9RHIZ
Tricarboxylate transporter family protein {ECO:0000313|EMBL:EKF41618.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
tricarboxylate transporter family protein
BSR_Ace_UAPBR_inlet_p_2_38018_5
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3489..4394
DNA (906bp) protein (302aa)
LysR family transcriptional regulator n=1 Tax=Nitratireductor indicus C115 RepID=K2NQI7_9RHIZ
LysR family transcriptional regulator {ECO:0000313|EMBL:EKF41615.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
LysR family transcriptional regulator
BSR_Ace_UAPBR_inlet_p_2_38018_6
bacterium YEK0313, Bacteria

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4923..6056
DNA (1134bp) protein (378aa)
Mandelate racemase/muconate lactonizing protein n=1 Tax=Nitratireductor indicus C115 RepID=K2N486_9RHIZ
L-rhamnonate dehydratase {ECO:0000313|EMBL:CEJ10176.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
mandelate racemase
BSR_Ace_UAPBR_inlet_p_2_38018_7
bacterium YEK0313, Bacteria

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6043..7062
DNA (1020bp) protein (340aa)
dTDP-glucose 4,6-dehydratase (EC:4.2.1.46)
Nucleoside-diphosphate-sugar epimerase n=1 Tax=Nitratireductor indicus C115 RepID=K2NS69_9RHIZ
dTDP-4-dehydro-6-deoxyglucose reductase {ECO:0000313|EMBL:CEJ10173.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
BSR_Ace_UAPBR_inlet_p_2_38018_8
bacterium YEK0313, Bacteria

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7059..7517
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Nitratireductor indicus C115 RepID=K2NWJ2_9RHIZ
Endoribonuclease L-PSP {ECO:0000313|EMBL:CEJ10172.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
LysR family transcriptional regulator
BSR_Ace_UAPBR_inlet_p_2_38018_9
bacterium YEK0313, Bacteria

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7608..9200
DNA (1593bp) protein (531aa)
ABC transporter substrate binding protein n=1 Tax=Oceanicola granulosus HTCC2516 RepID=Q2CC33_9RHOB
Oligopeptide-binding protein AppA {ECO:0000313|EMBL:CEJ10171.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
ABC transporter periplasmic protein
BSR_Ace_UAPBR_inlet_p_2_38018_10
bacterium YEK0313, Bacteria

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9291..10235
DNA (945bp) protein (315aa)
ABC transporter permease protein n=1 Tax=Oceanicola granulosus HTCC2516 RepID=Q2CC32_9RHOB
Glutathione transport system permease protein GsiC {ECO:0000313|EMBL:CEJ10170.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
dppB3; ABC transporter permease
BSR_Ace_UAPBR_inlet_p_2_38018_11
bacterium YEK0313, Bacteria

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10243..11103
DNA (861bp) protein (287aa)
Binding-protein-dependent transport system inner membrane protein n=1 Tax=Nitratireductor indicus C115 RepID=K2P484_9RHIZ
Putative D,D-dipeptide transport system permease protein DdpC {ECO:0000313|EMBL:CEJ10169.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
binding-protein-dependent transport system inner membrane protein
BSR_Ace_UAPBR_inlet_p_2_38018_12
bacterium YEK0313, Bacteria

Not on your lists

comp(11168..11887)
DNA (720bp) protein (240aa)
Regulatory protein GntR HTH n=1 Tax=Nitratireductor indicus C115 RepID=K2NS66_9RHIZ
HTH-type transcriptional regulator LutR {ECO:0000313|EMBL:CEJ10168.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
regulatory protein GntR HTH
BSR_Ace_UAPBR_inlet_p_2_38018_13
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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12054..13754
DNA (1701bp) protein (567aa)
Thiamine pyrophosphate protein n=1 Tax=Nitratireductor indicus C115 RepID=K2NWI8_9RHIZ
Thiamine pyrophosphate protein {ECO:0000313|EMBL:EKF42164.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
thiamine pyrophosphate enzyme, central domain protein
BSR_Ace_UAPBR_inlet_p_2_38018_14
bacterium YEK0313, Bacteria

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13787..14662
DNA (876bp) protein (292aa)
Putative esterase n=1 Tax=Nitratireductor indicus C115 RepID=K2NWJ6_9RHIZ
Acetyl esterase {ECO:0000313|EMBL:CEJ10167.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
esterase
BSR_Ace_UAPBR_inlet_p_2_38018_15
bacterium YEK0313, Bacteria

Not on your lists

14697..15317
DNA (621bp) protein (207aa)
Uncharacterized protein n=1 Tax=Nitratireductor indicus C115 RepID=K2NS74_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CEJ10166.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
hypothetical protein
BSR_Ace_UAPBR_inlet_p_2_38018_16
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15574..15957
DNA (384bp) protein (128aa)
Putative 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8I5E9_AZOC5
2-hydroxyhepta-2,4-diene-1,7-dioate isomerase {ECO:0000313|EMBL:KFL29819.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
2-hydroxyhepta-2,4-diene-1,7-dioate isomerase
BSR_Ace_UAPBR_inlet_p_2_38018_17
Pseudoxanthomonas spadix, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(16698..18011)
DNA (1314bp) protein (438aa)
HipA domain-containing protein n=1 Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7UT92_PSEUP
HipA domain-containing protein
HipA domain-containing protein {ECO:0000313|EMBL:AER57338.1}; TaxID=1045855 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas spadix (strain BD-a59).;"
BSR_Ace_UAPBR_inlet_p_2_38018_18
Pseudoxanthomonas spadix, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(18011..18259)
DNA (249bp) protein (83aa)
XRE family transcriptional regulator n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI00030472F3
XRE family transcriptional regulator
XRE family transcriptional regulator {ECO:0000313|EMBL:AER57339.1}; TaxID=1045855 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas spadix (strain BD-a59).;"
BSR_Ace_UAPBR_inlet_p_2_38018_19
Novosphingobium pentaromativorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18482..18661
DNA (180bp) protein (60aa)
Pentapeptide repeat protein n=2 Tax=Sphingomonadaceae RepID=N1MFC6_9SPHN
pentapeptide repeat protein
Uncharacterized protein {ECO:0000313|EMBL:EHJ57920.1}; TaxID=1088721 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium pentaromativorans US6-1.;"
BSR_Ace_UAPBR_inlet_p_2_38018_20
Rhizobium sp. AP16, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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19070..19600
DNA (531bp) protein (177aa)
RNA polymerase sigma factor, sigma-70 family n=1 Tax=Rhizobium sp. AP16 RepID=J2D877_9RHIZ
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:EJK78872.1}; TaxID=1144306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. AP16.;"
fec I like protein
BSR_Ace_UAPBR_inlet_p_2_38018_21
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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19742..20752
DNA (1011bp) protein (337aa)
FecR protein n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3SN13_NITWN
FecR protein
FecR protein {ECO:0000313|EMBL:ABA06328.1}; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391).;"
BSR_Ace_UAPBR_inlet_p_2_38018_22
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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20863..23358
DNA (2496bp) protein (832aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003612797
Outer membrane receptor proteins, mostly Fe transport {ECO:0000313|EMBL:GAD23754.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
fhuA; ferrichrome-iron transporter
BSR_Ace_UAPBR_inlet_p_2_38018_23
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23371..24651
DNA (1281bp) protein (427aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000379DB42
Uncharacterized protein {ECO:0000313|EMBL:GAD23753.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
major Facilitator Superfamily protein
BSR_Ace_UAPBR_inlet_p_2_38018_24
Rhodomicrobium vannielii, Rhodomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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24641..25732
DNA (1092bp) protein (364aa)
Siderophore-interacting protein n=1 Tax=Rhodomicrobium vannielii (strain ATCC 17100 / ATH 3.1.1 / DSM 162 / LMG 4299) RepID=E3I546_RHOVT
Siderophore-interacting protein
Siderophore-interacting protein {ECO:0000313|EMBL:ADP70496.1}; TaxID=648757 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Rhodomicrobium.;" source="Rhodomicrobium vannielii (strain ATCC 17100 / ATH 3.1.1 / DSM 162 /; LMG 4299).;"
BSR_Ace_UAPBR_inlet_p_2_38018_25
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25775..26206
DNA (432bp) protein (144aa)
Putative uncharacterized protein n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3SQZ5_NITWN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABA05296.1}; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391).;"
BSR_Ace_UAPBR_inlet_p_2_38018_26
unknown

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26531..26836
DNA (306bp) protein (102aa)

This feature has no annotations

BSR_Ace_UAPBR_inlet_p_2_38018_27
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(26858..27757)
DNA (900bp) protein (300aa)
Uncharacterized protein n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8IPC2_AZOC5
Uncharacterized protein {ECO:0000313|EMBL:KFC67268.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
BSR_Ace_UAPBR_inlet_p_2_38018_28
Novosphingobium sp. P6W, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(27900..28865)
DNA (966bp) protein (322aa)
hypothetical protein n=1 Tax=Xanthobacteraceae RepID=UPI000367F332
Scaffold7, whole genome shotgun sequence {ECO:0000313|EMBL:KIS31968.1}; TaxID=1609758 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. P6W.;"
short-chain dehydrogenase/reductase SDR
BSR_Ace_UAPBR_inlet_p_2_38018_29
Novosphingobium sp. P6W, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28943..29458
DNA (516bp) protein (172aa)
hypothetical protein n=1 Tax=Xanthobacteraceae RepID=UPI00035CDA50
Scaffold7, whole genome shotgun sequence {ECO:0000313|EMBL:KIS31969.1}; TaxID=1609758 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. P6W.;"
DNA-binding domain-containing protein, AraC-type
BSR_Ace_UAPBR_inlet_p_2_38018_30
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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29723..30223
DNA (501bp) protein (167aa)
RNA polymerase sigma-70 factor, ECF subfamily protein n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WYG2_9BRAD
RNA polymerase sigma-70 factor, ECF subfamily protein {ECO:0000313|EMBL:EAQ34977.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
sigma24, FecI
Displaying items 1-30 of 100 in total

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