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BSR_Ace_UAPBR_middle_p_196932

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Displaying items 1-30 of 69 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BSR_Ace_UAPBR_middle_p_196932_1
marine gamma proteobacterium HTCC2148, Gammaproteobacteria, Proteobacteria, Bacteria

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1..399
DNA (399bp) protein (133aa)
hypothetical protein n=1 Tax=Nevskia ramosa RepID=UPI0003B67428
Tetratricopeptide repeat domain protein {ECO:0000313|EMBL:EEB76795.1}; TaxID=247634 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; OM60 clade.;" source="marine gamma proteobacterium HTCC2148.;"
hypothetical protein
BSR_Ace_UAPBR_middle_p_196932_2
BJP_IG2103_Dechloromonas_63_51, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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612..1094
DNA (483bp) protein (161aa)
hypothetical protein n=1 Tax=Singularimonas variicoloris RepID=UPI0003718F21
competence/damage-inducible protein CinA-like protein
Tax=BJP_IG2103_Dechloromonas_63_51
BSR_Ace_UAPBR_middle_p_196932_3
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1248..1835
DNA (588bp) protein (196aa)
RNA 2',3'-cyclic phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01940}; Short=RNA 2',3'-CPDase {ECO:0000256|HAMAP-Rule:MF_01940};; EC=3.1.4.- {ECO:0000256|HAMAP-Rule:MF_01940};; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;"
hypothetical protein n=1 Tax=Singularimonas variicoloris RepID=UPI000361E975
2'-5' RNA ligase
BSR_Ace_UAPBR_middle_p_196932_4
Thioalkalivibrio nitratireducens, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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2067..3092
DNA (1026bp) protein (342aa)
recombinase RecA n=1 Tax=Singularimonas variicoloris RepID=UPI000379BBA7
recA_[H]; RecA protein
Protein RecA {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; Recombinase A {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; TaxID=1255043 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio nitratireducens (strain DSM 14787 / UNIQEM 213 /; ALEN2).;"
BSR_Ace_UAPBR_middle_p_196932_5
Hydrocarboniphaga effusa, Hydrocarboniphaga, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3073..3555
DNA (483bp) protein (161aa)
hypothetical protein n=1 Tax=Singularimonas variicoloris RepID=UPI000381D2E0
Regulatory protein RecX {ECO:0000256|HAMAP-Rule:MF_01114, ECO:0000256|SAAS:SAAS00093789}; TaxID=1172194 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Sinobacteraceae; Hydrocarboniphaga.;" source="Hydrocarboniphaga effusa AP103.;"
recX; recombination regulator RecX
BSR_Ace_UAPBR_middle_p_196932_6
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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comp(3614..4675)
DNA (1062bp) protein (354aa)
Transcriptional regulator AraC family n=1 Tax=Patulibacter medicamentivorans RepID=H0E4B5_9ACTN
Transcriptional regulator AraC family {ECO:0000313|EMBL:EHN11484.1}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
AraC family transcriptional regulator
BSR_Ace_UAPBR_middle_p_196932_7
Pseudomonas alcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4753..6141
DNA (1389bp) protein (463aa)
Putative Baeyer-Villiger monooxygenase n=1 Tax=Pseudomonas alcaligenes NBRC 14159 RepID=U2ZPA9_PSEAC
Putative Baeyer-Villiger monooxygenase {ECO:0000313|EMBL:GAD62887.1}; TaxID=1215092 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas alcaligenes NBRC 14159.;"
monooxygenase, flavin-binding family
BSR_Ace_UAPBR_middle_p_196932_8
Rhodococcus equi, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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6138..6980
DNA (843bp) protein (281aa)
hypothetical protein n=1 Tax=Singularimonas variicoloris RepID=UPI0003743130
short chain dehydrogenase
Putative short chain dehydrogenase {ECO:0000313|EMBL:CBH48393.1}; TaxID=685727 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus equi (strain 103S) (Corynebacterium equi).;"
BSR_Ace_UAPBR_middle_p_196932_9
Hydrocarboniphaga effusa, Hydrocarboniphaga, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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7094..9727
DNA (2634bp) protein (878aa)
Alanine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015689}; EC=6.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015673};; Alanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00036}; TaxID=1172194 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Sinobacteraceae; Hydrocarboniphaga.;" source="Hydrocarboniphaga effusa AP103.;"
alaS; alanyl-tRNA synthetase (EC:6.1.1.7)
hypothetical protein n=1 Tax=Singularimonas variicoloris RepID=UPI000363AC11
BSR_Ace_UAPBR_middle_p_196932_10
Hydrocarboniphaga effusa, Hydrocarboniphaga, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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9810..11039
DNA (1230bp) protein (410aa)
Aspartokinase {ECO:0000256|RuleBase:RU003448}; EC=2.7.2.4 {ECO:0000256|RuleBase:RU003448};; TaxID=1172194 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Sinobacteraceae; Hydrocarboniphaga.;" source="Hydrocarboniphaga effusa AP103.;"
aspartate kinase (EC:2.7.2.4)
aspartokinase n=1 Tax=Singularimonas variicoloris RepID=UPI00035E6EC3
BSR_Ace_UAPBR_middle_p_196932_11
uncultured Thiohalocapsa sp. PB-PSB1, Thiohalocapsa, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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11161..11355
DNA (195bp) protein (65aa)
Carbon storage regulator homolog n=1 Tax=uncultured Thiohalocapsa sp. PB-PSB1 RepID=V4JLQ0_9GAMM
Carbon storage regulator homolog {ECO:0000256|HAMAP-Rule:MF_00167, ECO:0000256|SAAS:SAAS00093889}; TaxID=1385625 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiohalocapsa; environmental samples.;" source="uncultured Thiohalocapsa sp. PB-PSB1.;"
carbon storage regulator CsrA
BSR_Ace_UAPBR_middle_p_196932_trna_1
unknown

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11461..11534
DNA (74bp)
transferRNA Arg
BSR_Ace_UAPBR_middle_p_196932_trna_2
unknown

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11743..11830
DNA (88bp)
transferRNA Ser
BSR_Ace_UAPBR_middle_p_196932_12
Bordetella sp. 8-296-03, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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12108..13181
DNA (1074bp) protein (358aa)
Peptidase, M48 family {ECO:0000313|EMBL:KCB36573.1}; EC=3.4.24.- {ECO:0000313|EMBL:KCB36573.1};; TaxID=1331258 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella hinzii 8-296-03.;"
Membrane-associated protease n=1 Tax=Bordetella holmesii H558 RepID=M5NX34_9BORD
peptidase M48 family protein
BSR_Ace_UAPBR_middle_p_196932_13
Serratia marcescens, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13309..13647
DNA (339bp) protein (113aa)
hypothetical protein n=1 Tax=Nevskia ramosa RepID=UPI0003B461E8
thioredoxin
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=1249634 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia marcescens FGI94.;"
BSR_Ace_UAPBR_middle_p_196932_14
Tatumella morbirosei, Tatumella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(13660..13926)
DNA (267bp) protein (89aa)
hypothetical protein n=1 Tax=Singularimonas variicoloris RepID=UPI0003778BE2
Coenzyme PQQ synthesis protein D {ECO:0000256|HAMAP-Rule:MF_00655}; Pyrroloquinoline quinone biosynthesis protein D {ECO:0000256|HAMAP-Rule:MF_00655}; TaxID=642227 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Tatumella.;" source="Tatumella morbirosei.;"
pqqD; pyrroloquinoline quinone biosynthesis protein PqqD
BSR_Ace_UAPBR_middle_p_196932_15
Hydrocarboniphaga effusa, Hydrocarboniphaga, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14227..16260)
DNA (2034bp) protein (678aa)
hypothetical protein n=1 Tax=Singularimonas variicoloris RepID=UPI00037DE2BA
Uncharacterized protein {ECO:0000313|EMBL:EIT71180.1}; TaxID=1172194 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Sinobacteraceae; Hydrocarboniphaga.;" source="Hydrocarboniphaga effusa AP103.;"
Sigma54-dependent transcriptional activator
BSR_Ace_UAPBR_middle_p_196932_16
Salinisphaera hydrothermalis, Salinisphaera, Salinisphaerales, Gammaproteobacteria, Proteobacteria, Bacteria

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16651..18162
DNA (1512bp) protein (504aa)
hypothetical protein n=1 Tax=Singularimonas variicoloris RepID=UPI00035F34F0
Aldehyde dehydrogenase {ECO:0000313|EMBL:KEZ76836.1}; TaxID=1304275 species="Bacteria; Proteobacteria; Gammaproteobacteria; Salinisphaerales; Salinisphaeraceae; Salinisphaera.;" source="Salinisphaera hydrothermalis C41B8.;"
NAD-dependent aldehyde dehydrogenase
BSR_Ace_UAPBR_middle_p_196932_17
Methyloversatilis universalis, Methyloversatilis, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18348..20207
DNA (1860bp) protein (620aa)
exaA2; ExaA2 protein (EC:1.1.99.8)
quinoprotein ethanol dehydrogenase n=1 Tax=Rhodocyclaceae bacterium RZ94 RepID=UPI000367A84D
PQQ-dependent dehydrogenase, methanol/ethanol family, Mdh2 {ECO:0000313|EMBL:EGK72216.1}; TaxID=1000565 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Methyloversatilis.;" source="Methyloversatilis universalis (strain ATCC BAA-1314 / JCM 13912 /; FAM5).;"
BSR_Ace_UAPBR_middle_p_196932_18
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20301..20975
DNA (675bp) protein (225aa)
Uncharacterized protein n=1 Tax=Sphingobium yanoikuyae ATCC 51230 RepID=K9DDH1_SPHYA
Uncharacterized protein {ECO:0000313|EMBL:EWY42433.1}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
hypothetical protein
BSR_Ace_UAPBR_middle_p_196932_19
Hydrocarboniphaga effusa, Hydrocarboniphaga, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21274..22482
DNA (1209bp) protein (403aa)
Uncharacterized protein n=1 Tax=Hydrocarboniphaga effusa AP103 RepID=I7ZH03_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIT71184.1}; TaxID=1172194 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Sinobacteraceae; Hydrocarboniphaga.;" source="Hydrocarboniphaga effusa AP103.;"
hypothetical protein
BSR_Ace_UAPBR_middle_p_196932_20
Hydrocarboniphaga effusa, Hydrocarboniphaga, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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22835..23290
DNA (456bp) protein (152aa)
Cytochrome C class I n=1 Tax=Hydrocarboniphaga effusa AP103 RepID=I7ZHH2_9GAMM
Cytochrome C class I {ECO:0000313|EMBL:EIT71187.1}; TaxID=1172194 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Sinobacteraceae; Hydrocarboniphaga.;" source="Hydrocarboniphaga effusa AP103.;"
cytochrome C
BSR_Ace_UAPBR_middle_p_196932_21
Hydrocarboniphaga effusa, Hydrocarboniphaga, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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23362..24138
DNA (777bp) protein (259aa)
hypothetical protein n=1 Tax=Singularimonas variicoloris RepID=UPI00036542BB
Uncharacterized protein {ECO:0000313|EMBL:EIT71198.1}; TaxID=1172194 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Sinobacteraceae; Hydrocarboniphaga.;" source="Hydrocarboniphaga effusa AP103.;"
hypothetical protein
BSR_Ace_UAPBR_middle_p_196932_22
Hydrocarboniphaga effusa, Hydrocarboniphaga, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24135..25082
DNA (948bp) protein (316aa)
hypothetical protein n=1 Tax=Singularimonas variicoloris RepID=UPI0003802FF8
Hydrolase, putative {ECO:0000313|EMBL:EIT71199.1}; TaxID=1172194 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Sinobacteraceae; Hydrocarboniphaga.;" source="Hydrocarboniphaga effusa AP103.;"
beta-lactamase domain-containing protein
BSR_Ace_UAPBR_middle_p_196932_23
Hydrocarboniphaga effusa, Hydrocarboniphaga, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25267..25656
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Hydrocarboniphaga effusa AP103 RepID=I8TBI1_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIT71200.1}; TaxID=1172194 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Sinobacteraceae; Hydrocarboniphaga.;" source="Hydrocarboniphaga effusa AP103.;"
hypothetical protein
BSR_Ace_UAPBR_middle_p_196932_24
Hydrocarboniphaga effusa, Hydrocarboniphaga, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25701..26963)
DNA (1263bp) protein (421aa)
hypothetical protein n=1 Tax=Singularimonas variicoloris RepID=UPI00036584C5
Uncharacterized protein {ECO:0000313|EMBL:EIT71210.1}; TaxID=1172194 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Sinobacteraceae; Hydrocarboniphaga.;" source="Hydrocarboniphaga effusa AP103.;"
oxidoreductase
BSR_Ace_UAPBR_middle_p_196932_25
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

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28285..29271
DNA (987bp) protein (329aa)
hypothetical protein n=1 Tax=Singularimonas variicoloris RepID=UPI00037C49B3
LysR family transcriptional regulator
Tax=RBG_16_Betaproteobacteria_66_20_curated
BSR_Ace_UAPBR_middle_p_196932_26
Hydrocarboniphaga effusa, Hydrocarboniphaga, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29455..32904
DNA (3450bp) protein (1150aa)
Pyruvate carboxylase {ECO:0000256|PIRNR:PIRNR001594}; EC=6.4.1.1 {ECO:0000256|PIRNR:PIRNR001594};; TaxID=1172194 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Sinobacteraceae; Hydrocarboniphaga.;" source="Hydrocarboniphaga effusa AP103.;"
pyruvate carboxylase n=1 Tax=Leeia oryzae RepID=UPI00035C4451
pyruvate carboxylase
BSR_Ace_UAPBR_middle_p_196932_27
Hydrocarboniphaga effusa, Hydrocarboniphaga, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32908..33414
DNA (507bp) protein (169aa)
Uncharacterized protein n=1 Tax=Hydrocarboniphaga effusa AP103 RepID=I7ZCG0_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIT69544.1}; TaxID=1172194 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Sinobacteraceae; Hydrocarboniphaga.;" source="Hydrocarboniphaga effusa AP103.;"
BSR_Ace_UAPBR_middle_p_196932_28
Arenimonas oryziterrae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33428..34159
DNA (732bp) protein (244aa)
hypothetical protein n=1 Tax=Nevskia ramosa RepID=UPI0003B30D39
Uncharacterized protein {ECO:0000313|EMBL:KFN44627.1}; TaxID=1121015 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas oryziterrae DSM 21050 = YC6267.;"
TIGR02453 family protein
Displaying items 1-30 of 69 in total

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