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BSR_Ace_UAPBR_middle_p_231660

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Displaying items 1-30 of 87 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BSR_Ace_UAPBR_middle_p_231660_1
Paracoccus sp. 39524, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(394..918)
DNA (525bp) protein (175aa)
30S ribosomal protein S9 n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1B6B0_PARDP
30S ribosomal protein S9 {ECO:0000256|HAMAP-Rule:MF_00532, ECO:0000256|RuleBase:RU003816}; TaxID=1525718 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus sp. 39524.;"
rpsI; 30S ribosomal protein S9
BSR_Ace_UAPBR_middle_p_231660_2
Paracoccus sp. 5503, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(921..1385)
DNA (465bp) protein (155aa)
50S ribosomal protein L13 n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=RL13_PARDP
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366, ECO:0000256|SAAS:SAAS00083943}; TaxID=1525717 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus sp. 5503.;"
rplM; 50S ribosomal protein L13
BSR_Ace_UAPBR_middle_p_231660_3
Paracoccus sp. 39524, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1541..1945)
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1B6A8_PARDP
Thioesterase {ECO:0000313|EMBL:KGJ16755.1}; TaxID=1525718 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus sp. 39524.;"
hypothetical protein
BSR_Ace_UAPBR_middle_p_231660_4
Paracoccus sphaerophysae, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2006..2797
DNA (792bp) protein (264aa)
Enoyl coenzyme A hydratase-like protein n=1 Tax=Paracoccus pantotrophus RepID=Q9EYZ0_PARPN
Enoyl-CoA hydratase {ECO:0000313|EMBL:KGJ02456.1}; TaxID=690417 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus sphaerophysae.;"
enoyl-CoA hydratase/isomerase
BSR_Ace_UAPBR_middle_p_231660_5
Paracoccus sphaerophysae, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2817..3554)
DNA (738bp) protein (246aa)
Uncharacterized protein n=1 Tax=Paracoccus aminophilus JCM 7686 RepID=S5XX33_PARAH
Cytochrome C biogenesis protein {ECO:0000313|EMBL:KGJ09113.1}; TaxID=690417 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus sphaerophysae.;"
hypothetical protein
BSR_Ace_UAPBR_middle_p_231660_6
Paracoccus sp. 10990, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3644..6472)
DNA (2829bp) protein (943aa)
Ribonuclease E {ECO:0000256|HAMAP-Rule:MF_00970}; Short=RNase E {ECO:0000256|HAMAP-Rule:MF_00970};; EC=3.1.26.12 {ECO:0000256|HAMAP-Rule:MF_00970};; TaxID=1525716 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus sp. 10990.;"
ribonuclease E (EC:3.1.26.12)
Ribonuclease E n=1 Tax=Paracoccus aminophilus JCM 7686 RepID=S5YEG1_PARAH
BSR_Ace_UAPBR_middle_p_231660_7
unknown

Not on your lists

comp(6940..7809)
DNA (870bp) protein (290aa)

This feature has no annotations

BSR_Ace_UAPBR_middle_p_231660_8
Paracoccus sp. 10990, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7894..9222)
DNA (1329bp) protein (443aa)
Fis family transcriptional regulator n=1 Tax=Paracoccus sp. N5 RepID=UPI00036CB9A1
Fis family transcriptional regulator {ECO:0000313|EMBL:KGJ20615.1}; TaxID=1525716 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus sp. 10990.;"
two component, sigma54 specific, Fis family transcriptional regulator
BSR_Ace_UAPBR_middle_p_231660_9
Paracoccus sphaerophysae, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9238..11043)
DNA (1806bp) protein (602aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=690417 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus sphaerophysae.;"
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1B6A3_PARDP
integral membrane sensor signal transduction histidine kinase
BSR_Ace_UAPBR_middle_p_231660_10
Paracoccus sp. 39524, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11142..11810)
DNA (669bp) protein (223aa)
Phosphoribosylformylglycinamidine synthase subunit PurQ {ECO:0000256|HAMAP-Rule:MF_00421, ECO:0000256|SAAS:SAAS00064601}; Short=FGAM synthase {ECO:0000256|HAMAP-Rule:MF_00421};; EC=6.3.5.3 {ECO:0000256|HAMAP-Rule:MF_00421, ECO:0000256|SAAS:SAAS00064588};; Formylglycinamide ribonucleotide amidotransferase subunit I {ECO:0000256|HAMAP-Rule:MF_00421}; Glutaminase PurQ {ECO:0000256|HAMAP-Rule:MF_00421}; Phosphoribosylformylglycinamidine synthase subunit I {ECO:0000256|HAMAP-Rule:MF_00421}; TaxID=1525718 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus sp. 39524.;"
Phosphoribosylformylglycinamidine synthase 1 n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1B6A2_PARDP
phosphoribosylformylglycinamidine synthase I
BSR_Ace_UAPBR_middle_p_231660_11
Nitratireductor basaltis, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11939..12727
DNA (789bp) protein (263aa)
beta-lactamase n=1 Tax=Paracoccus zeaxanthinifaciens RepID=UPI0003B6283E
Zn-dependent hydrolases of the beta-lactamase fold-like protein {ECO:0000313|EMBL:KFB10268.1}; TaxID=472175 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor basaltis.;"
beta-lactamase fold Zn-dependent hydrolase
BSR_Ace_UAPBR_middle_p_231660_12
Paracoccus sp. 39524, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12783..13997)
DNA (1215bp) protein (405aa)
Isocitrate dehydrogenase [NADP] {ECO:0000256|PIRNR:PIRNR000108}; EC=1.1.1.42 {ECO:0000256|PIRNR:PIRNR000108};; TaxID=1525718 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus sp. 39524.;"
isocitrate dehydrogenase (EC:1.1.1.42)
isocitrate dehydrogenase n=1 Tax=Paracoccus sp. N5 RepID=UPI00037394BC
BSR_Ace_UAPBR_middle_p_231660_13
Paracoccus sphaerophysae, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14159..14818)
DNA (660bp) protein (220aa)
Alpha/beta hydrolase n=1 Tax=Paracoccus aminophilus JCM 7686 RepID=S5Y2A0_PARAH
Alpha/beta hydrolase {ECO:0000313|EMBL:KGJ01943.1}; TaxID=690417 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus sphaerophysae.;"
alpha/beta hydrolase
BSR_Ace_UAPBR_middle_p_231660_14
Paracoccus sphaerophysae, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15067..15537
DNA (471bp) protein (157aa)
Rrf2 family transcriptional regulator n=1 Tax=Paracoccus sp. TRP RepID=UPI000225F005
Rrf2 family transcriptional regulator {ECO:0000313|EMBL:KGJ01942.1}; TaxID=690417 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus sphaerophysae.;"
BadM/Rrf2 family transcriptional regulator
BSR_Ace_UAPBR_middle_p_231660_15
Paracoccus sp. 39524, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15676..16191
DNA (516bp) protein (172aa)
Uncharacterized protein n=1 Tax=Paracoccus aminophilus JCM 7686 RepID=S5Y2Q6_PARAH
Uncharacterized protein {ECO:0000313|EMBL:KGJ16743.1}; TaxID=1525718 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus sp. 39524.;"
hypothetical protein
BSR_Ace_UAPBR_middle_p_231660_16
Paracoccus sp. 5503, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16266..16508)
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Sphingobium yanoikuyae ATCC 51230 RepID=K9D6Q9_SPHYA
Plasmid stabilization protein {ECO:0000313|EMBL:KGJ23072.1}; TaxID=1525717 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus sp. 5503.;"
hypothetical protein
BSR_Ace_UAPBR_middle_p_231660_17
Paracoccus sp. 39524, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16583..17365)
DNA (783bp) protein (261aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1B4J5_PARDP
Short-chain dehydrogenase {ECO:0000313|EMBL:KGJ17005.1}; TaxID=1525718 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus sp. 39524.;"
short-chain dehydrogenase/reductase SDR
BSR_Ace_UAPBR_middle_p_231660_18
Paracoccus sp. 5503, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17445..17795)
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=Roseovarius sp. 217 RepID=A3W1F7_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:KGJ23075.1}; TaxID=1525717 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus sp. 5503.;"
hypothetical protein
BSR_Ace_UAPBR_middle_p_231660_19
Paracoccus sp. 361, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17798..18517)
DNA (720bp) protein (240aa)
hypothetical protein n=1 Tax=Paracoccus sp. N5 RepID=UPI0003744F92
Uncharacterized protein {ECO:0000313|EMBL:KIX17526.1}; TaxID=1603292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus sp. 361.;"
hypothetical protein
BSR_Ace_UAPBR_middle_p_231660_20
Paracoccus sphaerophysae, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18592..19917)
DNA (1326bp) protein (442aa)
Histidine kinase n=2 Tax=Paracoccus denitrificans RepID=A1B4J8_PARDP
ATPase {ECO:0000313|EMBL:KGJ07983.1}; TaxID=690417 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus sphaerophysae.;"
histidine kinase
BSR_Ace_UAPBR_middle_p_231660_21
Paracoccus sphaerophysae, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19917..21074)
DNA (1158bp) protein (386aa)
hypothetical protein n=1 Tax=Paracoccus sp. N5 RepID=UPI0003632774
GfdT {ECO:0000313|EMBL:KGJ07984.1}; TaxID=690417 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus sphaerophysae.;"
hypothetical protein
BSR_Ace_UAPBR_middle_p_231660_22
Paracoccus sp. 10990, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21076..21813)
DNA (738bp) protein (246aa)
Two component transcriptional regulator, LuxR family n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1B4K0_PARDP
LuxR family transcriptional regulator {ECO:0000313|EMBL:KGJ20822.1}; TaxID=1525716 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus sp. 10990.;"
LuxR family transcriptional regulator
BSR_Ace_UAPBR_middle_p_231660_23
Paracoccus sphaerophysae, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21984..23036
DNA (1053bp) protein (351aa)
ABC transporter substrate-binding protein n=1 Tax=Paracoccus sp. TRP RepID=UPI000225F9F0
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KGJ07986.1}; TaxID=690417 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus sphaerophysae.;"
ABC transporter periplasmic solute-binding protein
BSR_Ace_UAPBR_middle_p_231660_24
Paracoccus sp. 10990, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23033..23836
DNA (804bp) protein (268aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1B4K2_PARDP
ABC transporter permease {ECO:0000313|EMBL:KGJ20824.1}; TaxID=1525716 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus sp. 10990.;"
binding-protein-dependent transport system inner membrane protein
BSR_Ace_UAPBR_middle_p_231660_25
Paracoccus sphaerophysae, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23826..24452
DNA (627bp) protein (209aa)
ABC transporter related protein n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1B4K3_PARDP
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KGJ07988.1}; TaxID=690417 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus sphaerophysae.;"
ABC transporter
BSR_Ace_UAPBR_middle_p_231660_26
Paracoccus denitrificans, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24504..25286)
DNA (783bp) protein (261aa)
3-hydroxybutyrate dehydrogenase n=1 Tax=Paracoccus sp. TRP RepID=UPI000225F7F2
3-hydroxybutyrate dehydrogenase
3-hydroxybutyrate dehydrogenase {ECO:0000313|EMBL:BAO20804.1}; TaxID=266 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus denitrificans.;"
BSR_Ace_UAPBR_middle_p_231660_27
Paracoccus sp. 10990, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25573..27438
DNA (1866bp) protein (622aa)
Peptide/nickel transport system, substrate-binding protein n=1 Tax=Paracoccus aminophilus JCM 7686 RepID=S5XRB0_PARAH
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KGJ19978.1}; TaxID=1525716 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus sp. 10990.;"
peptide/nickel transport system, substrate-binding protein
BSR_Ace_UAPBR_middle_p_231660_28
Paracoccus sphaerophysae, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27435..27788)
DNA (354bp) protein (118aa)
hypothetical protein n=1 Tax=Paracoccus sp. TRP RepID=UPI000225F6FF
Uncharacterized protein {ECO:0000313|EMBL:KGJ07995.1}; TaxID=690417 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus sphaerophysae.;"
hypothetical protein
BSR_Ace_UAPBR_middle_p_231660_29
Paracoccus sphaerophysae, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27891..28226)
DNA (336bp) protein (112aa)
hypothetical protein n=1 Tax=Paracoccus sp. TRP RepID=UPI000225F974
Uncharacterized protein {ECO:0000313|EMBL:KGJ07996.1}; TaxID=690417 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus sphaerophysae.;"
hypothetical protein
BSR_Ace_UAPBR_middle_p_231660_30
Paracoccus sphaerophysae, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28447..28731)
DNA (285bp) protein (95aa)
Uncharacterized protein n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1B5B5_PARDP
Uncharacterized protein {ECO:0000313|EMBL:KGJ07997.1}; TaxID=690417 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus sphaerophysae.;"
hypothetical protein
Displaying items 1-30 of 87 in total

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