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BSR_Ace_UAPBR_middle_p_90641

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Displaying items 1-30 of 53 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BSR_Ace_UAPBR_middle_p_90641_1
Paracoccus denitrificans, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..138)
DNA (138bp) protein (46aa)
60 kDa chaperonin n=2 Tax=Paracoccus denitrificans RepID=CH60_PARDP
groEL; molecular chaperone GroEL
60 kDa chaperonin {ECO:0000255|HAMAP-Rule:MF_00600}; GroEL protein {ECO:0000255|HAMAP-Rule:MF_00600}; Protein Cpn60 {ECO:0000255|HAMAP-Rule:MF_00600}; TaxID=266 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus denitrificans.;"
BSR_Ace_UAPBR_middle_p_90641_2
Paracoccus versutus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(177..464)
DNA (288bp) protein (96aa)
molecular chaperone GroES n=1 Tax=Paracoccus sp. N5 RepID=UPI000378F5BD
10 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00580, ECO:0000256|RuleBase:RU000535}; GroES protein {ECO:0000256|HAMAP-Rule:MF_00580}; Protein Cpn10 {ECO:0000256|HAMAP-Rule:MF_00580}; TaxID=34007 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus versutus (Thiobacillus versutus).;"
groES; co-chaperonin GroES
BSR_Ace_UAPBR_middle_p_90641_3
Paracoccus versutus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

662..1963
DNA (1302bp) protein (434aa)
glycosyl transferase family 1 n=1 Tax=Paracoccus sp. TRP RepID=UPI000225F9DF
Glycosyl transferase family 1 {ECO:0000313|EMBL:KGJ07842.1}; TaxID=34007 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus versutus (Thiobacillus versutus).;"
putative glycosyltransferase
BSR_Ace_UAPBR_middle_p_90641_4
Paracoccus versutus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2025..3071
DNA (1047bp) protein (349aa)
GumN family protein n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1B879_PARDP
Polysaccharide biosynthesis protein GumN {ECO:0000313|EMBL:KGJ07843.1}; TaxID=34007 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus versutus (Thiobacillus versutus).;"
GumN family protein
BSR_Ace_UAPBR_middle_p_90641_5
Paracoccus versutus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3061..3396
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1B880_PARDP
Uncharacterized protein {ECO:0000313|EMBL:KGJ07844.1}; TaxID=34007 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus versutus (Thiobacillus versutus).;"
hypothetical protein
BSR_Ace_UAPBR_middle_p_90641_6
Paracoccus versutus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3396..4037
DNA (642bp) protein (214aa)
Uncharacterized protein n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1B881_PARDP
Uncharacterized protein {ECO:0000313|EMBL:KGJ07845.1}; TaxID=34007 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus versutus (Thiobacillus versutus).;"
hypothetical protein
BSR_Ace_UAPBR_middle_p_90641_7
Paracoccus versutus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4104..5024
DNA (921bp) protein (307aa)
manganese-dependent inorganic pyrophosphatase (EC:3.6.1.1)
Inorganic diphosphatase n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1B882_PARDP
Inorganic pyrophosphatase {ECO:0000313|EMBL:KGJ07846.1}; TaxID=34007 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus versutus (Thiobacillus versutus).;"
BSR_Ace_UAPBR_middle_p_90641_8
Paracoccus versutus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5040..5909
DNA (870bp) protein (290aa)
HAD-superfamily subfamily IIA hydrolase like protein n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1B883_PARDP
HAD family hydrolase {ECO:0000313|EMBL:KGJ07847.1}; TaxID=34007 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus versutus (Thiobacillus versutus).;"
HAD family hydrolase
BSR_Ace_UAPBR_middle_p_90641_9
Paracoccus versutus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6018..6461
DNA (444bp) protein (148aa)
MaoC domain protein dehydratase n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1B884_PARDP
Dehydratase {ECO:0000313|EMBL:KGJ07848.1}; TaxID=34007 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus versutus (Thiobacillus versutus).;"
dehydratase
BSR_Ace_UAPBR_middle_p_90641_10
Paracoccus versutus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6554..7423
DNA (870bp) protein (290aa)
Riboflavin biosynthesis protein {ECO:0000256|PIRNR:PIRNR004491}; EC=2.7.1.26 {ECO:0000256|PIRNR:PIRNR004491};; EC=2.7.7.2 {ECO:0000256|PIRNR:PIRNR004491};; TaxID=34007 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus versutus (Thiobacillus versutus).;"
FMN adenylyltransferase / riboflavin kinase n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1B885_PARDP
riboflavin biosynthesis protein RibF
BSR_Ace_UAPBR_middle_p_90641_11
Paracoccus versutus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7423..7863
DNA (441bp) protein (147aa)
UPF0260 protein Pden_3663 n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1B886_PARDP
UPF0260 protein IT40_19695 {ECO:0000256|HAMAP-Rule:MF_00676}; TaxID=34007 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus versutus (Thiobacillus versutus).;"
hypothetical protein
BSR_Ace_UAPBR_middle_p_90641_12
Paracoccus versutus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7860..8903
DNA (1044bp) protein (348aa)
L-threonine aldolase {ECO:0000256|PIRNR:PIRNR038940}; EC=4.1.2.48 {ECO:0000256|PIRNR:PIRNR038940};; TaxID=34007 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus versutus (Thiobacillus versutus).;"
threonine aldolase (EC:4.1.2.5)
L-threonine aldolase n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1B887_PARDP
BSR_Ace_UAPBR_middle_p_90641_13
Paracoccus versutus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9015..9482)
DNA (468bp) protein (156aa)
competence damage-inducible protein A n=1 Tax=Paracoccus sp. N5 RepID=UPI00036D4688
Damage-inducible protein CinA {ECO:0000313|EMBL:KGJ07852.1}; TaxID=34007 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus versutus (Thiobacillus versutus).;"
CinA domain-containing protein
BSR_Ace_UAPBR_middle_p_90641_14
Paracoccus versutus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9479..9976)
DNA (498bp) protein (166aa)
Phosphatidylglycerophosphatase A {ECO:0000256|PIRNR:PIRNR006162}; EC=3.1.3.27 {ECO:0000256|PIRNR:PIRNR006162};; Phosphatidylglycerolphosphate phosphatase A {ECO:0000256|PIRNR:PIRNR006162}; TaxID=34007 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus versutus (Thiobacillus versutus).;"
Phosphatidylglycerophosphatase A n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1B889_PARDP
phosphatidylglycerophosphatase A
BSR_Ace_UAPBR_middle_p_90641_15
Paracoccus versutus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9979..11244)
DNA (1266bp) protein (422aa)
Bifunctional enzyme IspD/IspF n=2 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=ISPDF_PARDP
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
Bifunctional enzyme IspD/IspF {ECO:0000256|HAMAP-Rule:MF_01520, ECO:0000256|SAAS:SAAS00096235}; TaxID=34007 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus versutus (Thiobacillus versutus).;"
BSR_Ace_UAPBR_middle_p_90641_16
Paracoccus versutus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11278..12003
DNA (726bp) protein (242aa)
Ribose-5-phosphate isomerase A {ECO:0000256|HAMAP-Rule:MF_00170, ECO:0000256|SAAS:SAAS00020824}; EC=5.3.1.6 {ECO:0000256|HAMAP-Rule:MF_00170, ECO:0000256|SAAS:SAAS00087684};; Phosphoriboisomerase A {ECO:0000256|HAMAP-Rule:MF_00170}; TaxID=34007 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus versutus (Thiobacillus versutus).;"
ribose 5-phosphate isomerase (EC:5.3.1.6)
Ribose-5-phosphate isomerase A n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1B891_PARDP
BSR_Ace_UAPBR_middle_p_90641_17
Paracoccus versutus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12000..13400
DNA (1401bp) protein (467aa)
NADPH-glutathione reductase n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1B892_PARDP
NADPH-glutathione reductase {ECO:0000313|EMBL:KGJ07856.1}; TaxID=34007 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus versutus (Thiobacillus versutus).;"
pyridine nucleotide-disulfide oxidoreductase dimerisation subunit
BSR_Ace_UAPBR_middle_p_90641_18
Paracoccus versutus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13459..14664
DNA (1206bp) protein (402aa)
Protease FtsH subunit HflK n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1B893_PARDP
Membrane protein {ECO:0000313|EMBL:KGJ07857.1}; TaxID=34007 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus versutus (Thiobacillus versutus).;"
HflK protein
BSR_Ace_UAPBR_middle_p_90641_19
Paracoccus versutus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14664..15791
DNA (1128bp) protein (376aa)
Protein HflC n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1B894_PARDP
Protease {ECO:0000313|EMBL:KGJ07858.1}; TaxID=34007 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus versutus (Thiobacillus versutus).;"
HflC protein
BSR_Ace_UAPBR_middle_p_90641_20
Paracoccus versutus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15868..17052)
DNA (1185bp) protein (395aa)
Uncharacterized protein n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1B895_PARDP
ABC transporter permease {ECO:0000313|EMBL:KGJ07859.1}; TaxID=34007 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus versutus (Thiobacillus versutus).;"
hypothetical protein
BSR_Ace_UAPBR_middle_p_90641_21
Paracoccus versutus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17419..18060
DNA (642bp) protein (214aa)
Transcriptional activator, TenA family n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1B896_PARDP
TenA family transcriptional regulator {ECO:0000313|EMBL:KGJ07860.1}; TaxID=34007 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus versutus (Thiobacillus versutus).;"
TenA family transcription regulator
BSR_Ace_UAPBR_middle_p_90641_22
Paracoccus versutus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18064..18537)
DNA (474bp) protein (158aa)
NUDIX hydrolase n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1B897_PARDP
NUDIX hydrolase {ECO:0000313|EMBL:KGJ07861.1}; TaxID=34007 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus versutus (Thiobacillus versutus).;"
NUDIX hydrolase
BSR_Ace_UAPBR_middle_p_90641_23
Paracoccus versutus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18720..19742)
DNA (1023bp) protein (341aa)
Ketol-acid reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00435, ECO:0000256|SAAS:SAAS00051427}; EC=1.1.1.86 {ECO:0000256|HAMAP-Rule:MF_00435, ECO:0000256|SAAS:SAAS00051427};; Acetohydroxy-acid isomeroreductase {ECO:0000256|HAMAP-Rule:MF_00435}; Alpha-keto-beta-hydroxylacyl reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00435}; TaxID=34007 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus versutus (Thiobacillus versutus).;"
Ketol-acid reductoisomerase n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=ILVC_PARDP
ketol-acid reductoisomerase
BSR_Ace_UAPBR_middle_p_90641_24
Paracoccus versutus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19869..20324
DNA (456bp) protein (152aa)
AsnC family transcriptional regulator n=1 Tax=Paracoccus sp. TRP RepID=UPI000225F619
AsnC family transcriptional regulator {ECO:0000313|EMBL:KGJ07863.1}; TaxID=34007 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus versutus (Thiobacillus versutus).;"
AsnC family transcriptional regulator
BSR_Ace_UAPBR_middle_p_90641_25
Paracoccus versutus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20321..20779
DNA (459bp) protein (153aa)
Transcriptional regulator, AsnC family n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1B2W1_PARDP
AsnC family transcriptional regulator {ECO:0000313|EMBL:KGJ07864.1}; TaxID=34007 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus versutus (Thiobacillus versutus).;"
AsnC family transcriptional regulator
BSR_Ace_UAPBR_middle_p_90641_26
Paracoccus versutus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21108..22811)
DNA (1704bp) protein (568aa)
Serine-type D-Ala-D-Ala carboxypeptidase n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1B2W0_PARDP
D-Ala-D-Ala carboxypeptidase {ECO:0000313|EMBL:KGJ07865.1}; TaxID=34007 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus versutus (Thiobacillus versutus).;"
serine-type D-Ala-D-Ala carboxypeptidase
BSR_Ace_UAPBR_middle_p_90641_27
Paracoccus versutus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23023..23340
DNA (318bp) protein (106aa)
ATP-dependent Clp protease adapter protein ClpS n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1B2V9_PARDP
ATP-dependent Clp protease adapter protein ClpS {ECO:0000256|HAMAP-Rule:MF_00302}; TaxID=34007 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus versutus (Thiobacillus versutus).;"
ATP-dependent Clp protease adaptor protein ClpS
BSR_Ace_UAPBR_middle_p_90641_28
Paracoccus versutus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23398..24393
DNA (996bp) protein (332aa)
16S rRNA m(2)G 1207 methyltransferase n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1B2V8_PARDP
MFS transporter {ECO:0000313|EMBL:KGJ07867.1}; TaxID=34007 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus versutus (Thiobacillus versutus).;"
methyltransferase small
BSR_Ace_UAPBR_middle_p_90641_29
Paracoccus versutus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24390..25199
DNA (810bp) protein (270aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1B2V7_PARDP
Oxidoreductase {ECO:0000313|EMBL:KGJ07868.1}; TaxID=34007 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus versutus (Thiobacillus versutus).;"
short-chain dehydrogenase/reductase SDR
BSR_Ace_UAPBR_middle_p_90641_30
Paracoccus versutus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25203..25616)
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1B2V6_PARDP
Uncharacterized protein {ECO:0000313|EMBL:KGJ07869.1}; TaxID=34007 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus versutus (Thiobacillus versutus).;"
hypothetical protein
Displaying items 1-30 of 53 in total

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