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BSR_Ace_UAPBR_middle_p_20977

Search features with annotation key words

Displaying items 1-30 of 169 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BSR_Ace_UAPBR_middle_p_20977_1
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(503..1576)
DNA (1074bp) protein (358aa)
Peptidase M23 n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XP85_9BACT
Peptidase M23 {ECO:0000313|EMBL:EEF58336.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
peptidase M23
BSR_Ace_UAPBR_middle_p_20977_2
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(1576..2223)
DNA (648bp) protein (216aa)
hypothetical protein n=1 Tax=Verrucomicrobia bacterium SCGC AAA164-E04 RepID=UPI00037A7E21
Uncharacterized protein {ECO:0000313|EMBL:EEF58335.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
BSR_Ace_UAPBR_middle_p_20977_3
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(2541..3020)
DNA (480bp) protein (160aa)
6,7-dimethyl-8-ribityllumazine synthase {ECO:0000256|HAMAP-Rule:MF_00178, ECO:0000256|RuleBase:RU003795}; Short=DMRL synthase {ECO:0000256|HAMAP-Rule:MF_00178};; Short=LS {ECO:0000256|HAMAP-Rule:MF_00178};; Short=Lumazine synthase {ECO:0000256|HAMAP-Rule:MF_00178};; EC=2.5.1.78 {ECO:0000256|HAMAP-Rule:MF_00178, ECO:0000256|RuleBase:RU003795};; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
ribH; 6,7-dimethyl-8-ribityllumazine synthase (EC:2.5.1.9)
6,7-dimethyl-8-ribityllumazine synthase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XST4_9BACT
BSR_Ace_UAPBR_middle_p_20977_4
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(3089..4336)
DNA (1248bp) protein (416aa)
riboflavin biosynthesis GTP cyclohydrolase II RibA (EC:3.5.4.25)
Riboflavin biosynthesis protein RibBA n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XST3_9BACT
Riboflavin biosynthesis protein RibBA {ECO:0000256|HAMAP-Rule:MF_01283, ECO:0000256|SAAS:SAAS00280052}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
BSR_Ace_UAPBR_middle_p_20977_5
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

4392..4949
DNA (558bp) protein (186aa)
3-isopropylmalate dehydratase, small subunit n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XGG3_9BACT
3-isopropylmalate dehydratase, small subunit {ECO:0000313|EMBL:EEF61014.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
3-isopropylmalate dehydratase small subunit
BSR_Ace_UAPBR_middle_p_20977_6
RLO_Verrucomicrobia_64_8, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

4957..5625
DNA (669bp) protein (223aa)
SNARE associated Golgi protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XDL1_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Verrucomicrobia_64_8_curated
BSR_Ace_UAPBR_middle_p_20977_7
Rubinisphaera brasiliensis, Rubinisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

5625..6341
DNA (717bp) protein (239aa)
Methyltransferase type 11 n=1 Tax=Planctomyces brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 / NBRC 103401 / IFAM 1448) RepID=F0SP11_PLABD
methyltransferase type 11
Methyltransferase type 11 {ECO:0000313|EMBL:ADY60087.1}; TaxID=756272 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rubinisphaera.;" source="Rubinisphaera brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 /; NBRC 103401 / IFAM 1448) (Planctomyces brasiliensis).;"
BSR_Ace_UAPBR_middle_p_20977_8
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

6345..7235
DNA (891bp) protein (297aa)
dTDP-4-dehydrorhamnose reductase (EC:1.1.1.133)
dTDP-4-dehydrorhamnose reductase {ECO:0000313|EMBL:ACB77267.1}; EC=1.1.1.133 {ECO:0000313|EMBL:ACB77267.1};; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
dTDP-4-dehydrorhamnose reductase n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZZT1_OPITP
BSR_Ace_UAPBR_middle_p_20977_9
Methylacidiphilum kamchatkense, Methylacidiphilum, Methylacidiphilales, Verrucomicrobia, Bacteria

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comp(7232..8446)
DNA (1215bp) protein (405aa)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; TaxID=1202785 species="Bacteria; Verrucomicrobia; unclassified Verrucomicrobia; Methylacidiphilales; Methylacidiphilaceae; Methylacidiphilum.;" source="Methylacidiphilum kamchatkense Kam1.;"
Signal peptidase I n=1 Tax=Methylacidiphilum fumariolicum SolV RepID=I0JXV1_9BACT
lepB; Signal peptidase I
BSR_Ace_UAPBR_middle_p_20977_10
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(8460..9884)
DNA (1425bp) protein (475aa)
Hopanoid biosynthesis associated radical SAM protein HpnJ n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XKG4_9BACT
Hopanoid biosynthesis associated radical SAM protein HpnJ {ECO:0000313|EMBL:EEF59634.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
hpnJ; hopanoid biosynthesis associated radical SAM protein HpnJ
BSR_Ace_UAPBR_middle_p_20977_11
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(9908..11191)
DNA (1284bp) protein (428aa)
Hopanoid biosynthesis associated radical SAM protein HpnH n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XKG5_9BACT
Hopanoid biosynthesis associated radical SAM protein HpnH {ECO:0000313|EMBL:EEF59635.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
hpnH; diploptene adenosyltransferase and reductase
BSR_Ace_UAPBR_middle_p_20977_12
unknown

Not on your lists

comp(11263..11514)
DNA (252bp) protein (84aa)

This feature has no annotations

BSR_Ace_UAPBR_middle_p_20977_13
RifOxyA12_full_Lentisphaerae_48_11_curated, Lentisphaerae, Bacteria

Not on your lists

comp(11597..13114)
DNA (1518bp) protein (506aa)
alpha-L-fucosidase (EC:3.2.1.51)
Alpha-L-fucosidase n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZYA7_OPITP
Tax=RifOxyA12_full_Lentisphaerae_48_11_curated
BSR_Ace_UAPBR_middle_p_20977_14
RBG_16_Planctomycetes_64_12_curated, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

13237..14565
DNA (1329bp) protein (443aa)
Oxidoreductase domain protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D8R0_9BACT
oxidoreductase domain-containing protein
Tax=RBG_16_Planctomycetes_64_12_curated
BSR_Ace_UAPBR_middle_p_20977_15
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(14671..15444)
DNA (774bp) protein (258aa)
Uncharacterized protein n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZZ01_OPITP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACB76324.1}; Flags: Precursor;; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
BSR_Ace_UAPBR_middle_p_20977_16
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

15516..16892
DNA (1377bp) protein (459aa)
Tyrosine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02006, ECO:0000256|SAAS:SAAS00105716}; EC=6.1.1.1 {ECO:0000256|HAMAP-Rule:MF_02006, ECO:0000256|SAAS:SAAS00105716};; Tyrosyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02006}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
tyrosyl-tRNA synthetase (EC:6.1.1.1)
Tyrosine--tRNA ligase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XHF6_9BACT
BSR_Ace_UAPBR_middle_p_20977_17
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

17241..18047
DNA (807bp) protein (269aa)
Histidinol phosphate phosphatase HisJ family {ECO:0000313|EMBL:EEF60118.1}; EC=3.1.3.15 {ECO:0000313|EMBL:EEF60118.1};; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
Histidinol phosphate phosphatase HisJ family n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XJ80_9BACT
his2; Histidinol phosphatase, PHP family
BSR_Ace_UAPBR_middle_p_20977_18
Rhodopirellula sallentina, Rhodopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(18093..19400)
DNA (1308bp) protein (436aa)
nucleotide sugar dehydrogenase (EC:1.1.1.132)
GDP-mannose 6-dehydrogenase AlgD n=1 Tax=Verrucomicrobium spinosum RepID=UPI000174580D
GDP-mannose 6-dehydrogenase {ECO:0000313|EMBL:EMI52257.1}; TaxID=1263870 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula sallentina SM41.;"
BSR_Ace_UAPBR_middle_p_20977_19
RifOxyA12_full_Lentisphaerae_48_11_curated, Lentisphaerae, Bacteria

Not on your lists

19611..20597
DNA (987bp) protein (329aa)
hypothetical protein n=1 Tax=Flexithrix dorotheae RepID=UPI00036F0616
putative integral membrane protein, putative sugar permease
Tax=RifOxyA12_full_Lentisphaerae_48_11_curated
BSR_Ace_UAPBR_middle_p_20977_20
RifOxyA12_full_Lentisphaerae_48_11_curated, Lentisphaerae, Bacteria

Not on your lists

20644..21570
DNA (927bp) protein (309aa)
ribokinase; K00852 ribokinase [EC:2.7.1.15] id=24486786 bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial species=Bacteroides intestinalis CAG:315 genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
ribokinase
Tax=RifOxyA12_full_Lentisphaerae_48_11_curated
BSR_Ace_UAPBR_middle_p_20977_21
unknown

Not on your lists

comp(21581..22519)
DNA (939bp) protein (313aa)
BSR_Ace_UAPBR_middle_p_20977_22
GWF2_Verrucomicrobia_62_7_curated, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(22519..23622)
DNA (1104bp) protein (368aa)
Mammalian cell entry related domain protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XHU5_9BACT
Tax=GWF2_Verrucomicrobia_62_7_curated
BSR_Ace_UAPBR_middle_p_20977_23
GWF2_Verrucomicrobia_62_7_curated, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(23625..24422)
DNA (798bp) protein (266aa)
ABC-type transport system protein n=1 Tax=uncultured bacterium CSLD10 RepID=G4WVW0_9BACT
ABC transporter ATP-binding protein
Tax=GWF2_Verrucomicrobia_62_7_curated
BSR_Ace_UAPBR_middle_p_20977_24
GWF2_Verrucomicrobia_62_7_curated, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(24436..25269)
DNA (834bp) protein (278aa)
Uncharacterized protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XHU3_9BACT
hypothetical protein
Tax=GWF2_Verrucomicrobia_62_7_curated
BSR_Ace_UAPBR_middle_p_20977_25
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(25281..25871)
DNA (591bp) protein (197aa)
hypothetical protein n=1 Tax=Verrucomicrobia bacterium SCGC AAA300-K03 RepID=UPI00036695D5
Maf-like protein Cflav_PD0298 {ECO:0000256|HAMAP-Rule:MF_00528}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
maf protein
BSR_Ace_UAPBR_middle_p_20977_26
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(25956..26657)
DNA (702bp) protein (234aa)
Ribosomal RNA small subunit methyltransferase E {ECO:0000256|PIRNR:PIRNR015601}; EC=2.1.1.193 {ECO:0000256|PIRNR:PIRNR015601};; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
Ribosomal RNA small subunit methyltransferase E n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XMT0_9BACT
hypothetical protein
BSR_Ace_UAPBR_middle_p_20977_27
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(26741..28537)
DNA (1797bp) protein (599aa)
Tetratricopeptide TPR_2 repeat protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XGB9_9BACT
Tetratricopeptide TPR_2 repeat protein {ECO:0000313|EMBL:EEF61281.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
TPR domain-containing protein
BSR_Ace_UAPBR_middle_p_20977_28
Opitutaceae bacterium TAV5, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(28709..28810)
DNA (102bp) protein (34aa)
Uncharacterized protein n=2 Tax=unclassified Opitutaceae RepID=I6ATZ0_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHF90755.1}; TaxID=794903 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV5.;"
BSR_Ace_UAPBR_middle_p_20977_29
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(28825..29706)
DNA (882bp) protein (294aa)
ATP phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00079, ECO:0000256|SAAS:SAAS00046302}; Short=ATP-PRT {ECO:0000256|HAMAP-Rule:MF_00079};; Short=ATP-PRTase {ECO:0000256|HAMAP-Rule:MF_00079};; EC=2.4.2.17 {ECO:0000256|HAMAP-Rule:MF_00079, ECO:0000256|SAAS:SAAS00046302};; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
ATP phosphoribosyltransferase (EC:2.4.2.17)
ATP phosphoribosyltransferase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XGC0_9BACT
BSR_Ace_UAPBR_middle_p_20977_30
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(29800..30246)
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XDK6_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF62152.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
hypothetical protein
Displaying items 1-30 of 169 in total

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