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BSR_Ace_UAPBR_middle_p_36148

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Displaying items 1-30 of 74 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BSR_Ace_UAPBR_middle_p_36148_1
GWF2_Verrucomicrobia_62_7_curated, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

249..1364
DNA (1116bp) protein (372aa)
Putative uncharacterized protein id=4611894 bin=GWF2_Lentisphaerae_49_21 species=Akkermansia muciniphila genus=Akkermansia taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good +
hypothetical protein
Tax=GWF2_Verrucomicrobia_62_7_curated
BSR_Ace_UAPBR_middle_p_36148_2
Picea sitchensis, Picea, Pinales, Pinidae, Streptophyta, Viridiplantae

Not on your lists

1368..1688
DNA (321bp) protein (107aa)
Putative uncharacterized protein n=1 Tax=Picea sitchensis RepID=D5A970_PICSI
Putative uncharacterized protein {ECO:0000313|EMBL:ADE76089.1}; TaxID=3332 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Pinidae; Pinales; Pinaceae; Picea.;" source="Picea sitchensis (Sitka spruce) (Pinus sitchensis).;"
periplasmic divalent cation tolerance protein
BSR_Ace_UAPBR_middle_p_36148_3
CG_Elusi_01, Elusimicrobia, Elusimicrobia, Bacteria

Not on your lists

1661..2860
DNA (1200bp) protein (400aa)
id=3136919 bin=GWC2_Elusimicrobia_64_44 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Elusimicrobia_64_44 organism_group=Elusimicrobia organism_desc=Good
Tax=CG_Elusi_01
BSR_Ace_UAPBR_middle_p_36148_4
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

2870..3547
DNA (678bp) protein (226aa)
Two component transcriptional regulator, winged helix family n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XB49_9BACT
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:EEF62734.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
OmpR family two-component response regulator
BSR_Ace_UAPBR_middle_p_36148_5
delta proteobacterium NaphS2, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3600..5003
DNA (1404bp) protein (468aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=88274 species="Bacteria; Proteobacteria; Deltaproteobacteria.;" source="delta proteobacterium NaphS2.;"
integral membrane sensor signal transduction histidine kinase (EC:2.7.13.3)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=delta proteobacterium NaphS2 RepID=D8FAI5_9DELT
BSR_Ace_UAPBR_middle_p_36148_6
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(5020..6096)
DNA (1077bp) protein (359aa)
Peptidase S41 n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XPG4_9BACT
Peptidase S41 {ECO:0000313|EMBL:EEF58304.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
carboxyl-terminal processing protease
BSR_Ace_UAPBR_middle_p_36148_7
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(6117..7418)
DNA (1302bp) protein (434aa)
Phosphoribosylamine--glycine ligase {ECO:0000256|HAMAP-Rule:MF_00138}; EC=6.3.4.13 {ECO:0000256|HAMAP-Rule:MF_00138};; GARS {ECO:0000256|HAMAP-Rule:MF_00138}; Glycinamide ribonucleotide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; Phosphoribosylglycinamide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
phosphoribosylamine/glycine ligase (EC:4.1.1.21 6.3.4.13)
Phosphoribosylamine--glycine ligase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XPG5_9BACT
BSR_Ace_UAPBR_middle_p_36148_8
Methylacidiphilum infernorum, Methylacidiphilum, Methylacidiphilales, Verrucomicrobia, Bacteria

Not on your lists

comp(7426..9234)
DNA (1809bp) protein (603aa)
Acetolactate synthase {ECO:0000256|RuleBase:RU003591}; EC=2.2.1.6 {ECO:0000256|RuleBase:RU003591};; TaxID=481448 species="Bacteria; Verrucomicrobia; unclassified Verrucomicrobia; Methylacidiphilales; Methylacidiphilaceae; Methylacidiphilum.;" source="Methylacidiphilum infernorum (isolate V4) (Methylokorus infernorum; (strain V4)).;"
Acetolactate synthase n=1 Tax=Methylacidiphilum infernorum (isolate V4) RepID=B3E0U4_METI4
ilvB; Acetolactate synthase large subunit or other thiamine pyrophosphate-requiring enzyme
BSR_Ace_UAPBR_middle_p_36148_9
Thermococcus barophilus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

comp(9684..9998)
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=Thermococcus barophilus (strain DSM 11836 / MP) RepID=F0LKH0_THEBM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADT83628.1}; TaxID=391623 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus barophilus (strain DSM 11836 / MP).;"
BSR_Ace_UAPBR_middle_p_36148_10
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

10298..11725
DNA (1428bp) protein (476aa)
Uncharacterized protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XF39_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF61537.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
hypothetical protein
BSR_Ace_UAPBR_middle_p_36148_11
RBG_19FT_COMBO_Planctomycetes_48_8_curated, Physcisphaerae, Planctomycetes, Bacteria

Not on your lists

11802..12515
DNA (714bp) protein (238aa)
Acetylesterase, lipase-GDSL family id=3343146 bin=GWF2_Bacteroidetes_42_66 species=Zobellia galactanivorans genus=Zobellia taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_42_66 organism_group=Bacteroidetes organism_desc=a73
xylanase
Tax=RBG_19FT_COMBO_Planctomycetes_48_8_curated
BSR_Ace_UAPBR_middle_p_36148_12
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

12568..13575
DNA (1008bp) protein (336aa)
Helix-turn-helix, type 11 domain protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XP79_9BACT
Helix-turn-helix, type 11 domain protein {ECO:0000313|EMBL:EEF58330.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
helix-turn-helix, type 11 domain-containing protein
BSR_Ace_UAPBR_middle_p_36148_13
unknown

Not on your lists

13718..14554
DNA (837bp) protein (279aa)

This feature has no annotations

BSR_Ace_UAPBR_middle_p_36148_14
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

14584..15360
DNA (777bp) protein (259aa)
Ribosomal RNA small subunit methyltransferase I {ECO:0000256|HAMAP-Rule:MF_01877}; EC=2.1.1.198 {ECO:0000256|HAMAP-Rule:MF_01877};; 16S rRNA 2'-O-ribose C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01877}; rRNA (cytidine-2'-O-)-methyltransferase RsmI {ECO:0000256|HAMAP-Rule:MF_01877}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
Ribosomal RNA small subunit methyltransferase I n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XRV5_9BACT
rsmI-A; ribosomal RNA smaLL subunit methyltransferase I
BSR_Ace_UAPBR_middle_p_36148_15
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(15357..16571)
DNA (1215bp) protein (405aa)
Uncharacterized protein n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3ESM2_AMOA5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACE06224.1}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
BSR_Ace_UAPBR_middle_p_36148_16
GWF2_Verrucomicrobia_62_7_curated, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

17008..18261
DNA (1254bp) protein (418aa)
L-rhamnose isomerase n=2 Tax=Singulisphaera acidiphila RepID=L0DQ95_SINAD
L-rhamnose isomerase
Tax=GWF2_Verrucomicrobia_62_7_curated
BSR_Ace_UAPBR_middle_p_36148_17
RBG_16_Aminicenantes_63_16_curated, Aminicenantes, Bacteria

Not on your lists

18373..19701
DNA (1329bp) protein (443aa)
sugar:proton symporter n=1 Tax=Hymenobacter norwichensis RepID=UPI0003B5A74D
rhamnose-proton symporter
Tax=RBG_16_Aminicenantes_63_16_curated
BSR_Ace_UAPBR_middle_p_36148_18
Planctopirus limnophila, Planctopirus, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

19719..21215
DNA (1497bp) protein (499aa)
carbohydrate kinase n=1 Tax=Schlesneria paludicola RepID=UPI000299D73E
carbohydrate kinase FGGY
Carbohydrate kinase FGGY {ECO:0000313|EMBL:ADG69233.1}; TaxID=521674 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Planctopirus.;" source="Planctopirus limnophila (strain ATCC 43296 / DSM 3776 / IFAM 1008 /; 290) (Planctomyces limnophilus).;"
BSR_Ace_UAPBR_middle_p_36148_19
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(21282..22397)
DNA (1116bp) protein (372aa)
Xylose isomerase domain protein TIM barrel n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XFS6_9BACT
Xylose isomerase domain protein TIM barrel {ECO:0000313|EMBL:EEF61440.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
xylose isomerase domain-containing protein
BSR_Ace_UAPBR_middle_p_36148_20
Ruminococcus sp. CAG:724, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22509..24347
DNA (1839bp) protein (613aa)
serine/threonine phosphatase n=1 Tax=Desulfovibrio desulfuricans RepID=UPI0003B34AA9
HAMP/SpoIIE domain-containing protein {ECO:0000313|EMBL:CCZ20270.1}; TaxID=1262966 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:724.;"
HAMP/SpoIIE domain-containing protein
BSR_Ace_UAPBR_middle_p_36148_21
Caldithrix abyssi, Caldithrix, Bacteria

Not on your lists

24398..25213
DNA (816bp) protein (272aa)
Phospholipase/Carboxylesterase n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XXS8_9BACT
Phospholipase/Carboxylesterase {ECO:0000313|EMBL:EHO39751.1}; Flags: Precursor;; TaxID=880073 species="Bacteria; Caldithrix.;" source="Caldithrix abyssi DSM 13497.;"
phospholipase/carboxylesterase
BSR_Ace_UAPBR_middle_p_36148_22
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25241..25972
DNA (732bp) protein (244aa)
Glycosyl transferase family 2 n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XL32_9BACT
glycosyl transferase 2
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
BSR_Ace_UAPBR_middle_p_36148_23
Opitutaceae bacterium TAV1, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(25974..27728)
DNA (1755bp) protein (585aa)
hypothetical protein n=1 Tax=Verrucomicrobia bacterium SCGC AAA164-E04 RepID=UPI000375269F
Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB {ECO:0000313|EMBL:EIQ01737.1}; TaxID=278956 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV1.;"
general secretion pathway protein E
BSR_Ace_UAPBR_middle_p_36148_24
unknown

Not on your lists

comp(27744..28265)
DNA (522bp) protein (174aa)

This feature has no annotations

BSR_Ace_UAPBR_middle_p_36148_25
unknown

Not on your lists

comp(28286..29467)
DNA (1182bp) protein (394aa)

This feature has no annotations

BSR_Ace_UAPBR_middle_p_36148_26
RifOxyC12_full_RIF_OD1_09_46_25_curated, RIF-OD1-9, Parcubacteria, Bacteria

Not on your lists

comp(29464..31353)
DNA (1890bp) protein (630aa)
Type IV pilus assembly protein PilM n=2 Tax=Methylovorus RepID=C6XAX3_METSD
type IV pilus assembly protein PilM
Tax=RifOxyC12_full_RIF_OD1_09_46_25_curated
BSR_Ace_UAPBR_middle_p_36148_27
Opitutaceae bacterium TAV1, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(31373..33274)
DNA (1902bp) protein (634aa)
Type II secretory pathway, component PulD n=1 Tax=Opitutaceae bacterium TAV1 RepID=I6B391_9BACT
Type II secretory pathway, component PulD {ECO:0000313|EMBL:EIQ01733.1}; Flags: Precursor;; TaxID=278956 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV1.;"
type II secretory pathway protein
BSR_Ace_UAPBR_middle_p_36148_trna_1
unknown

Not on your lists

comp(33715..33786)
DNA (72bp)
transferRNA Val
BSR_Ace_UAPBR_middle_p_36148_28
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

33803..35098
DNA (1296bp) protein (432aa)
Putative SAM-dependent methyltransferase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XPC8_9BACT
Putative SAM-dependent methyltransferase {ECO:0000313|EMBL:EEF58268.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
SAM-dependent methyltransferase
BSR_Ace_UAPBR_middle_p_36148_29
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(35146..37110)
DNA (1965bp) protein (655aa)
DNA mismatch repair protein MutL n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XKB3_9BACT
DNA mismatch repair protein MutL {ECO:0000256|HAMAP-Rule:MF_00149, ECO:0000256|SAAS:SAAS00058680}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
DNA mismatch repair protein MutL
Displaying items 1-30 of 74 in total

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