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BSR_Ace_UAPBR_middle_p_30994

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Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BSR_Ace_UAPBR_middle_p_30994_1

Not on your lists

comp(381..1907)
DNA (1527bp) protein (509aa)
Integral membrane protein MviN n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XJM6_9BACT
Integral membrane protein MviN {ECO:0000313|EMBL:AIA18464.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
integral membrane protein MviN
BSR_Ace_UAPBR_middle_p_30994_2
Thiorhodovibrio sp. 970, Thiorhodovibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2047..3063)
DNA (1017bp) protein (339aa)
GDP-mannose 4,6-dehydratase {ECO:0000256|HAMAP-Rule:MF_00955}; EC=4.2.1.47 {ECO:0000256|HAMAP-Rule:MF_00955};; GDP-D-mannose dehydratase {ECO:0000256|HAMAP-Rule:MF_00955}; TaxID=631362 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiorhodovibrio.;" source="Thiorhodovibrio sp. 970.;"
GDP-D-mannose dehydratase 1 (EC:4.2.1.47)
GDP-mannose 4,6-dehydratase n=1 Tax=Thiorhodovibrio sp. 970 RepID=H8Z634_9GAMM
BSR_Ace_UAPBR_middle_p_30994_3
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(3065..3829)
DNA (765bp) protein (255aa)
Nucleotidyl transferase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D758_9BACT
Nucleotidyl transferase {ECO:0000313|EMBL:EDY17709.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
gcd1; nucleoside-diphosphate-sugar pyrophosphorylase
BSR_Ace_UAPBR_middle_p_30994_4
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(3826..5568)
DNA (1743bp) protein (581aa)
Phosphoenolpyruvate-protein phosphotransferase {ECO:0000256|PIRNR:PIRNR000732}; EC=2.7.3.9 {ECO:0000256|PIRNR:PIRNR000732};; Phosphotransferase system, enzyme I {ECO:0000256|PIRNR:PIRNR000732}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
Phosphoenolpyruvate-protein phosphotransferase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XCX4_9BACT
PtsA; phosphoenolpyruvate-protein kinase
BSR_Ace_UAPBR_middle_p_30994_5
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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6158..8446
DNA (2289bp) protein (763aa)
Anaerobic ribonucleoside triphosphate reductase {ECO:0000313|EMBL:EGJ10759.1}; EC=1.17.4.2 {ECO:0000313|EMBL:EGJ10759.1};; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
nrdD; anaerobic ribonucleoside-triphosphate reductase NrdD (EC:1.17.4.2)
Anaerobic ribonucleoside triphosphate reductase n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LQZ1_9BURK
BSR_Ace_UAPBR_middle_p_30994_6
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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8479..8652
DNA (174bp) protein (58aa)
Putative uncharacterized protein id=1362749 bin=GWE1_T_denit_62_9 species=Ectothiorhodospira sp. PHS-1 genus=Ectothiorhodospira taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
BSR_Ace_UAPBR_middle_p_30994_7
Cupriavidus sp. HMR-1, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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8649..9278
DNA (630bp) protein (210aa)
Ribonucleoside triphosphate reductase-activating protein (NrdG-D activase) n=1 Tax=Cupriavidus sp. HMR-1 RepID=L2EHI7_9BURK
Ribonucleoside triphosphate reductase-activating protein (NrdG-D activase) {ECO:0000313|EMBL:EKZ99079.1}; TaxID=1249621 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. HMR-1.;"
anaerobic ribonucleoside-triphosphate reductase activating protein
BSR_Ace_UAPBR_middle_p_30994_8
Pleurocapsa minor, Pleurocapsa, Pleurocapsales, Cyanobacteria, Bacteria

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9275..9856
DNA (582bp) protein (194aa)
dCTP deaminase {ECO:0000256|SAAS:SAAS00054754}; EC=3.5.4.13 {ECO:0000256|SAAS:SAAS00054754};; TaxID=118163 species="Bacteria; Cyanobacteria; Pleurocapsales; Pleurocapsa.;" source="Pleurocapsa sp. PCC 7327.;"
Deoxycytidine triphosphate deaminase n=1 Tax=Pleurocapsa sp. PCC 7327 RepID=K9T3L5_9CYAN
deoxycytidine triphosphate deaminase
BSR_Ace_UAPBR_middle_p_30994_9
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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10374..12692
DNA (2319bp) protein (773aa)
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00172, ECO:0000256|SAAS:SAAS00049969}; EC=2.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00172, ECO:0000256|SAAS:SAAS00050077};; Cobalamin-independent methionine synthase {ECO:0000256|HAMAP-Rule:MF_00172}; Methionine synthase, vitamin-B12 independent isozyme {ECO:0000256|HAMAP-Rule:MF_00172}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC:2.1.1.14)
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CZD5_9BACT
BSR_Ace_UAPBR_middle_p_30994_10
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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13162..14445
DNA (1284bp) protein (428aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XA84_9BACT
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:EEF63425.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
efflux transporter, RND family, MFP subunit
BSR_Ace_UAPBR_middle_p_30994_11
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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14454..15164
DNA (711bp) protein (237aa)
ABC transporter-related protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DC70_9BACT
ABC transporter-related protein {ECO:0000313|EMBL:EDY15947.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
ABC transporter-like protein
BSR_Ace_UAPBR_middle_p_30994_12
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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15187..16407
DNA (1221bp) protein (407aa)
Uncharacterized protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XA86_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF63427.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
antimicrobial peptide ABC transporter permease
BSR_Ace_UAPBR_middle_p_30994_13
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

16404..17657
DNA (1254bp) protein (418aa)
Uncharacterized protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XA87_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF63428.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
ABC transporter efflux protein
BSR_Ace_UAPBR_middle_p_30994_14
Desulfotomaculum ruminis, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(17677..20760)
DNA (3084bp) protein (1028aa)
Type I site-specific deoxyribonuclease, HsdR family n=1 Tax=Desulfotomaculum ruminis (strain ATCC 23193 / DSM 2154 / NCIB 8452 / DL) RepID=F6DN99_DESRL
Type I site-specific deoxyribonuclease, HsdR family {ECO:0000313|EMBL:AEG61790.1}; TaxID=696281 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum ruminis (strain ATCC 23193 / DSM 2154 / NCIB 8452 /; DL).;"
type I site-specific deoxyribonuclease HsdR family
BSR_Ace_UAPBR_middle_p_30994_15
Bacillus cereus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(20781..22079)
DNA (1299bp) protein (433aa)
Uncharacterized protein n=1 Tax=Bacillus cereus VD021 RepID=R8HC51_BACCE
Uncharacterized protein {ECO:0000313|EMBL:EOO70455.1}; TaxID=1053224 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group.;" source="Bacillus cereus VD021.;"
hypothetical protein
BSR_Ace_UAPBR_middle_p_30994_16
Proteus vulgaris, Proteus, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(22076..23629)
DNA (1554bp) protein (518aa)
Restriction modification system DNA specificity domain protein n=1 Tax=Thermincola potens (strain JR) RepID=D5XDB9_THEPJ
putative type I restriction-modification system specificity subunit
Type I restriction modification DNA specificity domain protein {ECO:0000313|EMBL:KGA58468.1}; TaxID=585 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Proteus.;" source="Proteus vulgaris.;"
BSR_Ace_UAPBR_middle_p_30994_17
Akkermansia muciniphila, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(23622..24023)
DNA (402bp) protein (134aa)
Nucleotidyltransferase substrate binding protein, HI0074 family n=1 Tax=Akkermansia muciniphila (strain ATCC BAA-835) RepID=B2UM64_AKKM8
nucleotidyltransferase substrate binding protein
Nucleotidyltransferase substrate binding protein, HI0074 family {ECO:0000313|EMBL:ACD05508.1}; TaxID=349741 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia.;" source="Akkermansia muciniphila (strain ATCC BAA-835 / Muc).;"
BSR_Ace_UAPBR_middle_p_30994_18
Capnocytophaga sp. oral taxon 332, Capnocytophaga, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(24097..25200)
DNA (1104bp) protein (368aa)
Uncharacterized protein n=1 Tax=Capnocytophaga sp. oral taxon 332 str. F0381 RepID=L1NWA9_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EKY07693.1}; TaxID=1127692 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Capnocytophaga.;" source="Capnocytophaga sp. oral taxon 332 str. F0381.;"
hypothetical protein
BSR_Ace_UAPBR_middle_p_30994_19
Desulfotomaculum ruminis, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(25190..26737)
DNA (1548bp) protein (516aa)
Site-specific DNA-methyltransferase (Adenine-specific) {ECO:0000313|EMBL:AEG61785.1}; EC=2.1.1.72 {ECO:0000313|EMBL:AEG61785.1};; TaxID=696281 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum ruminis (strain ATCC 23193 / DSM 2154 / NCIB 8452 /; DL).;"
Site-specific DNA-methyltransferase (Adenine-specific) n=1 Tax=Desulfotomaculum ruminis (strain ATCC 23193 / DSM 2154 / NCIB 8452 / DL) RepID=F6DMM4_DESRL
adenine-specific DNA-methyltransferase
BSR_Ace_UAPBR_middle_p_30994_20
Desulfitobacterium dichloroeliminans, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(27127..28137)
DNA (1011bp) protein (337aa)
Virulence protein n=1 Tax=Desulfitobacterium dichloroeliminans (strain LMG P-21439 / DCA1) RepID=L0F3V2_DESDL
virulence protein
Virulence protein {ECO:0000313|EMBL:AGA67857.1}; TaxID=871963 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" source="Desulfitobacterium dichloroeliminans (strain LMG P-21439 / DCA1).;"
BSR_Ace_UAPBR_middle_p_30994_21
Ruminiclostridium thermocellum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(28162..28728)
DNA (567bp) protein (189aa)
NADPH-dependent FMN reductase n=3 Tax=Clostridium thermocellum RepID=A3DFH3_CLOTH
NADPH-dependent FMN reductase
NADPH-dependent FMN reductase {ECO:0000313|EMBL:ABN52702.1}; TaxID=203119 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium thermocellum (strain ATCC 27405 / DSM 1237 / NBRC 103400 /; NCIMB 10682 / NRRL B-4536 / VPI 7372) (Ruminiclostridium; thermocellum).;"
BSR_Ace_UAPBR_middle_p_30994_22
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(28756..29934)
DNA (1179bp) protein (393aa)
RNA methyltransferase, TrmA family n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XDW9_9BACT
RNA methyltransferase, TrmA family {ECO:0000313|EMBL:EEF61860.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
RNA methyltransferase, TrmA family
BSR_Ace_UAPBR_middle_p_30994_23
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(29988..31304)
DNA (1317bp) protein (439aa)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344}; EC=2.5.1.7 {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344};; Enoylpyruvate transferase {ECO:0000256|HAMAP-Rule:MF_00111}; UDP-N-acetylglucosamine enolpyruvyl transferase {ECO:0000256|HAMAP-Rule:MF_00111}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
UDP-N-acetylglucosamine 1-carboxyvinyltransferase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XCI7_9BACT
murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase
BSR_Ace_UAPBR_middle_p_30994_24
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(31359..34385)
DNA (3027bp) protein (1009aa)
Acriflavin resistance protein n=1 Tax=planctomycete KSU-1 RepID=I3IKQ5_9PLAN
acriflavin resistance protein
Tax=GWA2_Rokubacteria_73_35_curated
BSR_Ace_UAPBR_middle_p_30994_25
GWB2_Nitrospirae_47_37_curated, Nitrospirae, Bacteria

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comp(34418..35689)
DNA (1272bp) protein (424aa)
Efflux transporter, RND family, MFP subunit id=2281113 bin=GWB2_Nitrospirae_rel_47_37 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
RND family efflux pump membrane fusion lipoprotein
Tax=GWB2_Nitrospirae_47_37_curated
BSR_Ace_UAPBR_middle_p_30994_26
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(35772..36281)
DNA (510bp) protein (170aa)
histidine kinase n=1 Tax=Rhizobium sp. JGI 0001005-K05 RepID=UPI00035FD49E
GAF domain-containing protein {ECO:0000313|EMBL:CDN94169.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;"
hypothetical protein
BSR_Ace_UAPBR_middle_p_30994_27
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(36398..37378)
DNA (981bp) protein (327aa)
Xylose isomerase domain-containing protein TIM barrel id=1884188 bin=GWD2_Bacteroidales_45_23 species=Runella slithyformis genus=Runella taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
xylose isomerase domain-containing protein
Tax=GWC2_Bacteroidetes_46_850_curated
BSR_Ace_UAPBR_middle_p_30994_28
unknown

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37743..39113
DNA (1371bp) protein (457aa)

This feature has no annotations

BSR_Ace_UAPBR_middle_p_30994_29
unknown

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39120..40403
DNA (1284bp) protein (428aa)

This feature has no annotations

Displaying 29 items

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