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BSR_Ace_UAPBR_middle_p_151921

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BSR_Ace_UAPBR_middle_p_151921_1
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(1..504)
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YBI7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEF66651.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
hypothetical protein
BSR_Ace_UAPBR_middle_p_151921_2
GWD2_Desulfuromonadales_61_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(767..1663)
DNA (897bp) protein (299aa)
Type II site-specific deoxyribonuclease n=1 Tax=Sinorhizobium meliloti (strain AK83) RepID=F6DWW2_SINMK
type II site-specific deoxyribonuclease
Tax=GWD2_Desulfuromonadales_61_12_curated
BSR_Ace_UAPBR_middle_p_151921_3
Pseudomonas alcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1734..2552)
DNA (819bp) protein (273aa)
Methyltransferase {ECO:0000256|RuleBase:RU362026}; EC=2.1.1.- {ECO:0000256|RuleBase:RU362026};; TaxID=43263 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas alcaligenes.;"
Pac25I methylase n=1 Tax=Pseudomonas alcaligenes RepID=Q9XAW6_PSEAC
Site-specific DNA-methyltransferase (cytosine-N(4)-specific).
BSR_Ace_UAPBR_middle_p_151921_4
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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3240..4097
DNA (858bp) protein (286aa)
Release factor glutamine methyltransferase {ECO:0000256|HAMAP-Rule:MF_02126}; Short=RF MTase {ECO:0000256|HAMAP-Rule:MF_02126};; EC=2.1.1.297 {ECO:0000256|HAMAP-Rule:MF_02126};; N5-glutamine methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-(glutamine-N5) MTase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-glutamine N-methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
Release factor glutamine methyltransferase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XCI6_9BACT
hemK; N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
BSR_Ace_UAPBR_middle_p_151921_5
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(4117..5169)
DNA (1053bp) protein (351aa)
Glycosyl transferase family 2 n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XIP1_9BACT
Glycosyl transferase family 2 {ECO:0000313|EMBL:EEF60304.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
glycosyltransferase
BSR_Ace_UAPBR_middle_p_151921_6
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(5198..6214)
DNA (1017bp) protein (339aa)
dTDP-glucose 4,6-dehydratase {ECO:0000256|RuleBase:RU004473}; EC=4.2.1.46 {ECO:0000256|RuleBase:RU004473};; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
dTDP-glucose 4,6-dehydratase n=2 Tax=Pedosphaera parvula Ellin514 RepID=B9XHJ9_9BACT
dTDP-glucose 4,6-dehydratase
BSR_Ace_UAPBR_middle_p_151921_7
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(6250..6933)
DNA (684bp) protein (228aa)
Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunit n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XI75_9BACT
Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunit {ECO:0000313|EMBL:EEF60568.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
glucose-1-phosphate thymidylyltransferase
BSR_Ace_UAPBR_middle_p_151921_8
Dehalogenimonas sp. WBC-2, Dehalogenimonas, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

comp(7088..7684)
DNA (597bp) protein (199aa)
LemA family protein n=1 Tax=Dehalogenimonas lykanthroporepellens (strain ATCC BAA-1523 / JCM 15061 / BL-DC-9) RepID=D8K1I7_DEHLB
LemA family protein
LemA {ECO:0000313|EMBL:AKG54173.1}; TaxID=943347 species="Bacteria; Chloroflexi; Dehalococcoidia; Dehalogenimonas.;" source="Dehalogenimonas sp. WBC-2.;"
BSR_Ace_UAPBR_middle_p_151921_9
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(7905..8237)
DNA (333bp) protein (111aa)
Glycoside hydrolase family 13 domain protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XPM1_9BACT
Glycoside hydrolase family 13 domain protein {ECO:0000313|EMBL:EEF58249.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
glycoside hydrolase family protein
BSR_Ace_UAPBR_middle_p_151921_10
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(8374..10008)
DNA (1635bp) protein (545aa)
GreA/GreB family elongation factor n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XT30_9BACT
GreA/GreB family elongation factor {ECO:0000313|EMBL:EEF57004.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
greA; transcription elongation factor GreA fused to uncharacterized associated domain
BSR_Ace_UAPBR_middle_p_151921_11
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

10385..11527
DNA (1143bp) protein (381aa)
Ribosomal RNA small subunit methyltransferase B {ECO:0000256|SAAS:SAAS00013752}; EC=2.1.1.- {ECO:0000256|SAAS:SAAS00276898};; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
Sun protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XT31_9BACT
N utilization substance protein B
BSR_Ace_UAPBR_middle_p_151921_12
Gimesia maris, Gimesia, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

11539..12375
DNA (837bp) protein (279aa)
Pyrroline-5-carboxylate reductase {ECO:0000256|HAMAP-Rule:MF_01925, ECO:0000256|RuleBase:RU003903}; Short=P5C reductase {ECO:0000256|HAMAP-Rule:MF_01925};; Short=P5CR {ECO:0000256|HAMAP-Rule:MF_01925};; EC=1.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01925, ECO:0000256|RuleBase:RU003903};; PCA reductase {ECO:0000256|HAMAP-Rule:MF_01925}; TaxID=344747 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Gimesia.;" source="Gimesia maris DSM 8797.;"
Pyrroline-5-carboxylate reductase n=1 Tax=Planctomyces maris DSM 8797 RepID=A6C9N7_9PLAN
pyrroline-5-carboxylate reductase
BSR_Ace_UAPBR_middle_p_151921_13
unknown

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13115..14005
DNA (891bp) protein (297aa)

This feature has no annotations

BSR_Ace_UAPBR_middle_p_151921_14
Methylobacter tundripaludum, Methylobacter, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(14006..14626)
DNA (621bp) protein (207aa)
Integrase catalytic region n=1 Tax=Methylobacter tundripaludum SV96 RepID=G3IZV9_9GAMM
Integrase catalytic region {ECO:0000313|EMBL:EGW20481.1}; TaxID=697282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylobacter.;" source="Methylobacter tundripaludum SV96.;"
hypothetical protein
Displaying 14 items

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