ggKbase home page

BSR_Ace_UAPBR_middle_p_171627

Search features with annotation key words

Displaying items 1-30 of 118 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BSR_Ace_UAPBR_middle_p_171627_1
unknown

Not on your lists

891..1172
DNA (282bp) protein (94aa)

This feature has no annotations

BSR_Ace_UAPBR_middle_p_171627_2
unknown

Not on your lists

1565..2113
DNA (549bp) protein (183aa)

This feature has no annotations

BSR_Ace_UAPBR_middle_p_171627_3

Not on your lists

2928..3551
DNA (624bp) protein (208aa)
site-specific recombinase/integrase n=1 Tax=Schlesneria paludicola RepID=UPI00029A4A1C
Marine sediment metagenome DNA, contig: S01H1_L03759 {ECO:0000313|EMBL:GAF75620.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
xerC; tyrosine recombinase XerC
BSR_Ace_UAPBR_middle_p_171627_4
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(4669..5994)
DNA (1326bp) protein (442aa)
hypothetical protein n=1 Tax=Verrucomicrobia bacterium SCGC AAA164-E04 RepID=UPI00037694E0
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA26134.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
BSR_Ace_UAPBR_middle_p_171627_5
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(6004..6927)
DNA (924bp) protein (308aa)
hypothetical protein n=1 Tax=Verrucomicrobia bacterium SCGC AAA164-E04 RepID=UPI00036CF85A
lactate/malate dehydrogenase
Lactate/malate dehydrogenase {ECO:0000313|EMBL:ACB74584.1}; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
BSR_Ace_UAPBR_middle_p_171627_6
Opitutaceae bacterium TAV5, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(6948..7991)
DNA (1044bp) protein (348aa)
hypothetical protein n=1 Tax=Verrucomicrobia bacterium SCGC AAA164-E04 RepID=UPI00037A4A3C
aldolase
Aldolase {ECO:0000313|EMBL:AHF89561.1}; TaxID=794903 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV5.;"
BSR_Ace_UAPBR_middle_p_171627_7
Opitutaceae bacterium TAV1, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(7988..8299)
DNA (312bp) protein (104aa)
hypothetical protein n=1 Tax=Verrucomicrobia bacterium SCGC AAA164-E04 RepID=UPI0003615227
carbon dioxide concentrating mechanism protein CcmL
Carbon dioxide concentrating mechanism/carboxysome shell protein {ECO:0000313|EMBL:EIQ00021.1}; TaxID=278956 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV1.;"
BSR_Ace_UAPBR_middle_p_171627_8
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(8306..8563)
DNA (258bp) protein (86aa)
hypothetical protein n=1 Tax=Verrucomicrobia bacterium SCGC AAA164-E04 RepID=UPI00037B0629
ethanolamine utilization protein EutN/carboxysome structural protein Ccml
Ethanolamine utilization protein EutN/carboxysome structural protein Ccml {ECO:0000313|EMBL:ACB74581.1}; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
BSR_Ace_UAPBR_middle_p_171627_9
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(8565..10019)
DNA (1455bp) protein (485aa)
hypothetical protein n=1 Tax=Verrucomicrobia bacterium SCGC AAA164-E04 RepID=UPI00037F3AF7
aldehyde dehydrogenase
Aldehyde Dehydrogenase {ECO:0000313|EMBL:ACB74580.1}; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
BSR_Ace_UAPBR_middle_p_171627_10
GWF2_Verrucomicrobia_62_7_curated, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(10033..10344)
DNA (312bp) protein (104aa)
hypothetical protein n=1 Tax=Verrucomicrobia bacterium SCGC AAA164-E04 RepID=UPI00036E19C3
ethanolamine utilization protein EutN
Tax=GWF2_Verrucomicrobia_62_7_curated
BSR_Ace_UAPBR_middle_p_171627_11
Opitutaceae bacterium TAV1, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(10348..10656)
DNA (309bp) protein (103aa)
hypothetical protein n=1 Tax=Verrucomicrobia bacterium SCGC AAA164-E04 RepID=UPI000364586D
carboxysome shell protein
Carbon dioxide concentrating mechanism/carboxysome shell protein {ECO:0000313|EMBL:EIQ00025.1}; TaxID=278956 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV1.;"
BSR_Ace_UAPBR_middle_p_171627_12
Opitutaceae bacterium TAV1, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(10679..11863)
DNA (1185bp) protein (395aa)
Acetate kinase {ECO:0000256|HAMAP-Rule:MF_00020}; EC=2.7.2.1 {ECO:0000256|HAMAP-Rule:MF_00020};; Acetokinase {ECO:0000256|HAMAP-Rule:MF_00020}; TaxID=278956 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV1.;"
hypothetical protein n=1 Tax=Verrucomicrobia bacterium SCGC AAA164-E04 RepID=UPI00035D246F
acetate kinase
BSR_Ace_UAPBR_middle_p_171627_13
GWF2_Verrucomicrobia_62_7_curated, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(11906..12187)
DNA (282bp) protein (94aa)
hypothetical protein n=1 Tax=Verrucomicrobia bacterium SCGC AAA164-E04 RepID=UPI0003653B26
microcompartments protein
Tax=GWF2_Verrucomicrobia_62_7_curated
BSR_Ace_UAPBR_middle_p_171627_14
Opitutaceae bacterium TAV5, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(12209..12478)
DNA (270bp) protein (90aa)
hypothetical protein n=1 Tax=Verrucomicrobia bacterium SCGC AAA164-E04 RepID=UPI000380D1A7
carboxysome shell protein
Carboxysome shell protein {ECO:0000313|EMBL:AHF89553.1}; TaxID=794903 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV5.;"
BSR_Ace_UAPBR_middle_p_171627_15
GWF2_Verrucomicrobia_62_7_curated, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(12525..13244)
DNA (720bp) protein (240aa)
hypothetical protein n=1 Tax=Verrucomicrobia bacterium SCGC AAA164-E04 RepID=UPI00036674F6
propanediol utilization protein
Tax=GWF2_Verrucomicrobia_62_7_curated
BSR_Ace_UAPBR_middle_p_171627_16
GWF2_Verrucomicrobia_62_7_curated, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

13382..14068
DNA (687bp) protein (229aa)
hypothetical protein n=1 Tax=Verrucomicrobia bacterium SCGC AAA164-E04 RepID=UPI000361D533
GntR family transcriptional regulator
Tax=GWF2_Verrucomicrobia_62_7_curated
BSR_Ace_UAPBR_middle_p_171627_17
RBG_13_Planctomycetes_46_10_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

14119..15744
DNA (1626bp) protein (542aa)
hypothetical protein n=1 Tax=Aminicenantes bacterium SCGC AAA252-F08 RepID=UPI0003B75678
Predicted kinase related to galactokinase and mevalonate kinase
Tax=RBG_13_Planctomycetes_46_10_curated
BSR_Ace_UAPBR_middle_p_171627_18
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

15737..16420
DNA (684bp) protein (228aa)
Transcriptional regulator, XRE family n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XDD4_9BACT
Transcriptional regulator, XRE family {ECO:0000313|EMBL:EEF62080.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
hypothetical protein
BSR_Ace_UAPBR_middle_p_171627_19
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

16444..17475
DNA (1032bp) protein (344aa)
PfkB domain protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XFS9_9BACT
PfkB domain protein {ECO:0000313|EMBL:EEF61443.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
bifunctional sugar kinase/adenylyltransferase
BSR_Ace_UAPBR_middle_p_171627_20
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

17529..18515
DNA (987bp) protein (329aa)
KpsF/GutQ family protein {ECO:0000313|EMBL:EEF57542.1}; EC=5.3.1.13 {ECO:0000313|EMBL:EEF57542.1};; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
KpsF/GutQ family protein (EC:5.3.1.13)
KpsF/GutQ family protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XRH1_9BACT
BSR_Ace_UAPBR_middle_p_171627_21
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

18543..19736
DNA (1194bp) protein (398aa)
Isopenicillin-N epimerase (EC:5.1.1.17)
Aminotransferase class V n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XBQ6_9BACT
Aminotransferase class V {ECO:0000313|EMBL:EEF62941.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
BSR_Ace_UAPBR_middle_p_171627_22
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(19742..20884)
DNA (1143bp) protein (381aa)
ApbE family lipoprotein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XT43_9BACT
ApbE family lipoprotein {ECO:0000313|EMBL:EEF56991.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
ApbE family lipoprotein
BSR_Ace_UAPBR_middle_p_171627_23
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20832..21188)
DNA (357bp) protein (119aa)
6-carboxy-5,6,7,8-tetrahydropterin synthase {ECO:0000256|PIRNR:PIRNR006113}; EC=4.-.-.- {ECO:0000256|PIRNR:PIRNR006113};; TaxID=743721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis (strain 11-1).;"
6-carboxy-5,6,7,8-tetrahydropterin synthase n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI0002D9BCFF
hypothetical protein
BSR_Ace_UAPBR_middle_p_171627_24
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(21181..22530)
DNA (1350bp) protein (450aa)
Acyl-CoA reductase {ECO:0000256|PIRNR:PIRNR009414}; EC=1.2.1.50 {ECO:0000256|PIRNR:PIRNR009414};; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
Acyl-CoA reductase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XN01_9BACT
BSR_Ace_UAPBR_middle_p_171627_25
Odoribacter splanchnicus CAG:14, Odoribacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22560..23642)
DNA (1083bp) protein (361aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00035C4F38
Glycosyl hydrolase 32 domain-containing protein
Glycosyl hydrolase family 32 domain protein {ECO:0000313|EMBL:CDB08826.1}; TaxID=1263090 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Odoribacter; environmental samples.;" source="Odoribacter splanchnicus CAG:14.;"
BSR_Ace_UAPBR_middle_p_171627_26
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(23797..24309)
DNA (513bp) protein (171aa)
Uncharacterized protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XF32_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF61530.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
BSR_Ace_UAPBR_middle_p_171627_27
Methylococcus capsulatus, Methylococcus, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24309..25046)
DNA (738bp) protein (246aa)
pyrF; orotidine 5'-phosphate decarboxylase (EC:4.1.1.23)
Orotidine 5'-phosphate decarboxylase {ECO:0000255|HAMAP-Rule:MF_01200}; EC=4.1.1.23 {ECO:0000255|HAMAP-Rule:MF_01200};; OMP decarboxylase {ECO:0000255|HAMAP-Rule:MF_01200}; Short=OMPDCase {ECO:0000255|HAMAP-Rule:MF_01200};; Short=OMPdecase {ECO:0000255|HAMAP-Rule:MF_01200};; TaxID=243233 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylococcus.;" source="Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath).;"
orotidine 5''''-phosphate decarboxylase n=1 Tax=Methylobacter marinus RepID=UPI0003670A53
BSR_Ace_UAPBR_middle_p_171627_28
Draconibacterium orientale, Draconibacterium, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25043..25843)
DNA (801bp) protein (267aa)
Tat pathway signal protein
Tat pathway signal protein {ECO:0000313|EMBL:AHW60818.1}; TaxID=1168034 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prolixibacteraceae; Draconibacterium.;" source="Draconibacterium orientale.;"
Putative uncharacterized protein id=3534822 bin=GWB1_Deltaproteobacteria_rel_55_8 species=Archaeoglobus veneficus genus=Archaeoglobus taxon_order=Archaeoglobales taxon_class=Archaeoglobi phylum=Euryarchaeota tax=GWB1_Deltaproteobacteria_rel_55_8 organism_group=Deltaproteobacteria organism_desc=Good
BSR_Ace_UAPBR_middle_p_171627_29
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(25935..26867)
DNA (933bp) protein (311aa)
hypothetical protein n=1 Tax=Verrucomicrobia bacterium SCGC AAA164-E04 RepID=UPI00035C0C3F
Uncharacterized protein {ECO:0000313|EMBL:EEF61924.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
iron-sulfur cluster-binding protein
BSR_Ace_UAPBR_middle_p_171627_30
Clostridiaceae bacterium BRH_c20a, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26824..27426)
DNA (603bp) protein (201aa)
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00109};; TaxID=1629719 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae.;" source="Clostridiaceae bacterium BRH_c20a.;"
hypothetical protein n=1 Tax=Verrucomicrobia bacterium SCGC AAA164-N20 RepID=UPI00037B1421
AroK; shikimate kinase
Displaying items 1-30 of 118 in total

View Taxonomy