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BSR_Lac_C_na_78461

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Displaying 21 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BSR_Lac_C_na_78461_1
Phascolarctobacterium succinatutens, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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3..1301
DNA (1299bp) protein (433aa)
Predicted ATPase (AAA+ superfamily) n=1 Tax=Phascolarctobacterium succinatutens CAG:287 RepID=R6WGX4_9FIRM
Predicted ATPase (AAA+ superfamily) {ECO:0000313|EMBL:CDD10388.1}; TaxID=1263101 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium succinatutens CAG:287.;"
Predicted ATPase (AAA+ superfamily)
BSR_Lac_C_na_78461_2
Acetobacter sp. CAG:267, Acetobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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1853..3808
DNA (1956bp) protein (652aa)
Uncharacterized protein n=1 Tax=Acetobacter sp. CAG:267 RepID=R5Y0E5_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CDA18249.1}; TaxID=1262684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acetobacter; environmental samples.;" source="Acetobacter sp. CAG:267.;"
hypothetical protein
BSR_Lac_C_na_78461_3
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4694..5956
DNA (1263bp) protein (421aa)
Diaminopimelate decarboxylase n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7IJD6_9FIRM
Diaminopimelate decarboxylase {ECO:0000313|EMBL:CDE51591.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
Orn/DAP/Arg decarboxylase 2
BSR_Lac_C_na_78461_4

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6313..8880
DNA (2568bp) protein (856aa)
Single-stranded-DNA-specific exonuclease RecJ n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7IIS0_9FIRM
Single-stranded-DNA-specific exonuclease RecJ {ECO:0000313|EMBL:AHF24328.1}; TaxID=1393492 species="Bacteria; environmental samples.;" source="uncultured bacterium Contig17.;"
ssDNA-binding protein
BSR_Lac_C_na_78461_5
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8895..11096
DNA (2202bp) protein (734aa)
(P)ppGpp synthetase I SpoT/RelA n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7IIA9_9FIRM
(P)ppGpp synthetase I SpoT/RelA {ECO:0000313|EMBL:CDE51529.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
SpoT; guanosine polyphosphate pyrophosphohydrolase/synthetase
BSR_Lac_C_na_78461_6
Planctopirus limnophila, Planctopirus, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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11149..11598
DNA (450bp) protein (150aa)
D-aminoacyl-tRNA deacylase {ECO:0000256|HAMAP-Rule:MF_00518, ECO:0000256|SAAS:SAAS00160054}; EC=3.1.1.96 {ECO:0000256|HAMAP-Rule:MF_00518, ECO:0000256|SAAS:SAAS00160046};; TaxID=521674 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Planctopirus.;" source="Planctopirus limnophila (strain ATCC 43296 / DSM 3776 / IFAM 1008 /; 290) (Planctomyces limnophilus).;"
D-tyrosyl-tRNA(Tyr) deacylase n=1 Tax=Planctomyces limnophilus (strain ATCC 43296 / DSM 3776 / IFAM 1008 / 290) RepID=D5SMU4_PLAL2
D-tyrosyl-tRNA(Tyr) deacylase
BSR_Lac_C_na_78461_7
Lachnospiraceae bacterium CAG:364, Clostridiales, Clostridia, Firmicutes, Bacteria

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11834..12436
DNA (603bp) protein (201aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium CAG:364 RepID=R6N7J0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC07040.1}; TaxID=1262983 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:364.;"
Zn-dependent hydrolases, including glyoxylases
BSR_Lac_C_na_78461_8
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12433..14295
DNA (1863bp) protein (621aa)
hemZ; oxygen-independent coproporphyrinogen-III oxidase 2 (EC:1.3.99.22)
Coproporphyrinogen dehydrogenase HemZ n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7IJ59_9FIRM
Coproporphyrinogen dehydrogenase HemZ {ECO:0000313|EMBL:CDE51521.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
BSR_Lac_C_na_78461_9
Clostridium sp. CAG:169, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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14473..15966
DNA (1494bp) protein (498aa)
Glycerol kinase {ECO:0000256|HAMAP-Rule:MF_00186, ECO:0000256|SAAS:SAAS00030041}; EC=2.7.1.30 {ECO:0000256|HAMAP-Rule:MF_00186, ECO:0000256|SAAS:SAAS00030041};; ATP:glycerol 3-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00186}; Glycerokinase {ECO:0000256|HAMAP-Rule:MF_00186}; TaxID=1262778 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:169.;"
glycerol kinase (EC:2.7.1.30)
Glycerol kinase n=1 Tax=Clostridium sp. CAG:169 RepID=R6BRZ4_9CLOT
BSR_Lac_C_na_78461_10
BJP_IG2069_Clostridiales_48_15, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(16259..17245)
DNA (987bp) protein (329aa)
Beta-lactamase n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PRU8_9CLOT
beta-lactamase
Tax=BJP_IG2069_Clostridiales_48_15
BSR_Lac_C_na_78461_11
BJP_IG2157_Clostridiales_35_16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(17574..18146)
DNA (573bp) protein (191aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2CYQ8_9BACT
hypothetical protein
Tax=BJP_IG2157_Clostridiales_35_16
BSR_Lac_C_na_78461_12
Paenibacillus mucilaginosus, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(18295..19179)
DNA (885bp) protein (295aa)
Uncharacterized protein n=1 Tax=Paenibacillus mucilaginosus (strain KNP414) RepID=F8F959_PAEMK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI42987.1}; TaxID=1036673 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus mucilaginosus (strain KNP414).;"
BSR_Lac_C_na_78461_13
Lachnospiraceae bacterium A4, Clostridiales, Clostridia, Firmicutes, Bacteria

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19474..20220
DNA (747bp) protein (249aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium A4 RepID=R9IP97_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS23651.1}; TaxID=397291 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium A4.;"
hypothetical protein
BSR_Lac_C_na_78461_14
Acetobacterium woodii, Acetobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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20500..20883
DNA (384bp) protein (128aa)
rbo; rubredoxin oxidoreductase (EC:1.15.1.1)
Rubredoxin oxidoreductase {ECO:0000313|EMBL:AFA48258.1}; EC=1.15.1.1 {ECO:0000313|EMBL:AFA48258.1};; TaxID=931626 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Acetobacterium.;" source="Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC; 1655).;"
Rubredoxin oxidoreductase n=1 Tax=Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC 1655) RepID=H6LFX0_ACEWD
BSR_Lac_C_na_78461_15
BJP_IG2069_Clostridiales_48_15, Clostridiales, Clostridia, Firmicutes, Bacteria

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21061..23514
DNA (2454bp) protein (818aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R8K3_CLOSW
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
Tax=BJP_IG2069_Clostridiales_48_15
BSR_Lac_C_na_78461_16
Desulfitobacterium hafniense, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(24069..24923)
DNA (855bp) protein (285aa)
ABC transporter n=1 Tax=Desulfitobacterium hafniense RepID=UPI000379B2B5
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=49338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" source="Desulfitobacterium hafniense (Desulfitobacterium frappieri).;"
ABC transporter
BSR_Lac_C_na_78461_17
Desulfitobacterium dehalogenans, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(24920..25852)
DNA (933bp) protein (311aa)
ABC transporter n=1 Tax=Desulfitobacterium sp. PCE1 RepID=UPI000380D7E6
multidrug ABC transporter ATPase
ABC-type multidrug transport system, ATPase component {ECO:0000313|EMBL:AFM01019.1}; Flags: Precursor;; TaxID=756499 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" source="Desulfitobacterium dehalogenans (strain ATCC 51507 / DSM 9161 /; JW/IU-DC1).;"
BSR_Lac_C_na_78461_18
Candidatus Arthromitus sp. SFB-mouse, Candidatus Arthromitus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(26224..26652)
DNA (429bp) protein (143aa)
Uncharacterized protein n=10 Tax=Candidatus Arthromitus RepID=F9VK65_ARTSS
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAK56477.1}; TaxID=1029718 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Candidatus Arthromitus.;" source="Arthromitus sp. (strain SFB-mouse-Japan).;"
BSR_Lac_C_na_78461_19
unknown

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comp(26765..28366)
DNA (1602bp) protein (534aa)

This feature has no annotations

BSR_Lac_C_na_78461_trna_1
unknown

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comp(28602..28673)
DNA (72bp)
transferRNA Asn
BSR_Lac_C_na_78461_20
unknown

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28682..28816
DNA (135bp) protein (45aa)

This feature has no annotations

Displaying 21 items

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