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BSR_Lac_C_na_37513

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BSR_Lac_C_na_37513_1
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..753
DNA (753bp) protein (251aa)
Uncharacterized protein (Fragment) n=1 Tax=Desulfovibrio alkalitolerans DSM 16529 RepID=S7UJY4_9DELT
hypothetical protein
Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
BSR_Lac_C_na_37513_2
Selenomonas sputigena, Selenomonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(1245..1559)
DNA (315bp) protein (105aa)
CRISPR-associated endoribonuclease Cas2 {ECO:0000256|HAMAP-Rule:MF_01471}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01471};; TaxID=546271 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Selenomonas.;" source="Selenomonas sputigena (strain ATCC 35185 / DSM 20758 / VPI D19B-28).;"
CRISPR-associated endoribonuclease Cas2 n=1 Tax=Selenomonas sputigena (strain ATCC 35185 / DSM 20758 / VPI D19B-28) RepID=C9LYV9_SELS3
CRISPR-associated protein Cas2
BSR_Lac_C_na_37513_3
Clostridium sp. ATCC 29733, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1629..2660)
DNA (1032bp) protein (344aa)
CRISPR-associated endonuclease Cas1 {ECO:0000256|HAMAP-Rule:MF_01470}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01470};; TaxID=1507 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. (strain ATCC 29733 / VPI C48-50).;"
CRISPR-associated endonuclease Cas1 n=1 Tax=Clostridium sp. (strain ATCC 29733 / VPI C48-50) RepID=U2DBU1_CLOS4
CRISPR-associated protein Cas1
BSR_Lac_C_na_37513_4
Ethanoligenens harbinense, Ethanoligenens, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2673..3341)
DNA (669bp) protein (223aa)
CRISPR-associated protein Cas4 n=1 Tax=Ethanoligenens harbinense (strain DSM 18485 / JCM 12961 / CGMCC 1.5033 / YUAN-3) RepID=E6U9V2_ETHHY
CRISPR-associated protein Cas4
CRISPR-associated protein Cas4 {ECO:0000313|EMBL:ADU26218.1}; TaxID=663278 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ethanoligenens.;" source="Ethanoligenens harbinense (strain DSM 18485 / JCM 12961 / CGMCC 1.5033; / YUAN-3).;"
BSR_Lac_C_na_37513_5
Clostridium sp. ATCC 29733, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3331..4170)
DNA (840bp) protein (280aa)
Uncharacterized protein n=1 Tax=Clostridium sp. (strain ATCC 29733 / VPI C48-50) RepID=U2EZK4_CLOS4
Uncharacterized protein {ECO:0000313|EMBL:ERJ00273.1}; TaxID=1507 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. (strain ATCC 29733 / VPI C48-50).;"
CRISPR-associated protein, Csd2 family
BSR_Lac_C_na_37513_6
Ethanoligenens harbinense, Ethanoligenens, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4174..6120)
DNA (1947bp) protein (649aa)
CRISPR-associated protein, Csd1 family n=1 Tax=Ethanoligenens harbinense (strain DSM 18485 / JCM 12961 / CGMCC 1.5033 / YUAN-3) RepID=E6U9V4_ETHHY
CRISPR-associated protein, Csd1 family
CRISPR-associated protein, Csd1 family {ECO:0000313|EMBL:ADU26220.1}; TaxID=663278 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ethanoligenens.;" source="Ethanoligenens harbinense (strain DSM 18485 / JCM 12961 / CGMCC 1.5033; / YUAN-3).;"
BSR_Lac_C_na_37513_7
Dethiosulfovibrio peptidovorans, Dethiosulfovibrio, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

comp(6117..6821)
DNA (705bp) protein (235aa)
CRISPR-associated protein Cas5 family n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=D2Z6K0_9BACT
CRISPR-associated protein Cas5 family {ECO:0000313|EMBL:EFC91097.1}; TaxID=469381 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Dethiosulfovibrio.;" source="Dethiosulfovibrio peptidovorans DSM 11002.;"
CRISPR-associated protein Cas5 family
BSR_Lac_C_na_37513_8
Ethanoligenens harbinense, Ethanoligenens, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6974..9457)
DNA (2484bp) protein (828aa)
CRISPR-associated HD domain protein n=1 Tax=Ethanoligenens harbinense (strain DSM 18485 / JCM 12961 / CGMCC 1.5033 / YUAN-3) RepID=E6U9V6_ETHHY
CRISPR-associated HD domain-containing protein
CRISPR-associated HD domain protein {ECO:0000313|EMBL:ADU26222.1}; TaxID=663278 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ethanoligenens.;" source="Ethanoligenens harbinense (strain DSM 18485 / JCM 12961 / CGMCC 1.5033; / YUAN-3).;"
BSR_Lac_C_na_37513_9
Bacillus thermotolerans, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

9976..10905
DNA (930bp) protein (310aa)
2-dehydropantoate 2-reductase {ECO:0000256|RuleBase:RU003776}; EC=1.1.1.169 {ECO:0000256|RuleBase:RU003776};; TaxID=1221996 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus thermotolerans.;"
2-dehydropantoate 2-reductase n=1 Tax=Desulfitobacterium hafniense RepID=UPI0003656B77
hypothetical protein
BSR_Lac_C_na_37513_10
Oscillibacter sp. CAG:155, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11344..12513)
DNA (1170bp) protein (390aa)
aminotransferase YbdL (EC:2.6.1.-)
Kynurenine--oxoglutarate transaminase n=1 Tax=Oscillibacter sp. CAG:155 RepID=R6UC46_9FIRM
Kynurenine--oxoglutarate transaminase {ECO:0000313|EMBL:CDC68327.1}; TaxID=1262910 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:155.;"
BSR_Lac_C_na_37513_11
BJP_IG2103_Clostridiales_50_15, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12800..13672
DNA (873bp) protein (291aa)
hypothetical protein
Uncharacterized protein id=4209981 bin=GWF2_Firmicute_57_13 species=Acetobacterium woodii genus=Acetobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Firmicute_57_13 organism_group=Firmicute
Tax=BJP_IG2103_Clostridiales_50_15
BSR_Lac_C_na_37513_12
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13909..14691)
DNA (783bp) protein (261aa)
Uncharacterized protein n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7IHZ2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE51404.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
hypothetical protein
BSR_Lac_C_na_37513_13
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14887..16542)
DNA (1656bp) protein (552aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9W4K9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY97784.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
beta-xylosidase
BSR_Lac_C_na_37513_14
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16854..17672)
DNA (819bp) protein (273aa)
Hydrolase, carbon-nitrogen family n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6LJA0_9FIRM
Hydrolase, carbon-nitrogen family {ECO:0000313|EMBL:EET59214.1}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
BSR_Lac_C_na_37513_15
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17677..18795)
DNA (1119bp) protein (373aa)
hypothetical protein n=1 Tax=Paenibacillus sp. HW567 RepID=UPI00037B4699
Unsaturated glucuronyl hydrolase {ECO:0000313|EMBL:CCZ61687.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
glycosyl hydrolase family protein
BSR_Lac_C_na_37513_16
Firmicutes bacterium CAG:94, Firmicutes, Bacteria

Not on your lists

comp(18813..19835)
DNA (1023bp) protein (341aa)
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein n=1 Tax=Firmicutes bacterium CAG:94 RepID=R6XZM7_9FIRM
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein {ECO:0000313|EMBL:CDD29223.1}; TaxID=1262989 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:94.;"
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein
BSR_Lac_C_na_37513_17
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19934..21499)
DNA (1566bp) protein (522aa)
ABC transporter, solute-binding protein n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6LJA7_9FIRM
ABC transporter, solute-binding protein {ECO:0000313|EMBL:EET59221.1}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
extracellular solute-binding protein
BSR_Lac_C_na_37513_18
Paenibacillus sp. JDR-2, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(21587..22507)
DNA (921bp) protein (307aa)
sugar ABC transporter permease n=1 Tax=Paenibacillus sanguinis RepID=UPI0003694DFA
binding-protein-dependent transport system inner membrane protein
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ACT00652.1}; TaxID=324057 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. (strain JDR-2).;"
BSR_Lac_C_na_37513_19
Paenibacillus sp. JDR-2, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(22537..23487)
DNA (951bp) protein (317aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Paenibacillus sp. (strain JDR-2) RepID=C6CTM0_PAESJ
binding-protein-dependent transport system inner membrane protein
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ACT00651.1}; TaxID=324057 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. (strain JDR-2).;"
BSR_Lac_C_na_37513_20
Caldicellulosiruptor saccharolyticus, Caldicellulosiruptor, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23839..25038)
DNA (1200bp) protein (400aa)
Helix-turn-helix-domain containing protein, AraC type n=1 Tax=Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903) RepID=A4XN10_CALS8
AraC family transcriptional regulator
Helix-turn-helix-domain containing protein, AraC type {ECO:0000313|EMBL:ABP68295.1}; Flags: Precursor;; TaxID=351627 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis; Caldicellulosiruptor.;" source="Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903 /; Tp8T 6331).;"
BSR_Lac_C_na_37513_21
unknown

Not on your lists

comp(26001..26447)
DNA (447bp) protein (149aa)

This feature has no annotations

BSR_Lac_C_na_37513_22
[Clostridium] cellulolyticum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26444..26923)
DNA (480bp) protein (160aa)
toxin secretion/phage lysis holin id=3236625 bin=GWF2_Clostridiales_38_85 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
toxin secretion/phage lysis holin
Toxin secretion/phage lysis holin {ECO:0000313|EMBL:ACL77113.1}; TaxID=394503 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 /; H10).;"
BSR_Lac_C_na_37513_23
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26920..27750)
DNA (831bp) protein (277aa)
hypothetical protein n=1 Tax=Amycolatopsis methanolica RepID=UPI00037A6B3B
peptidoglycan-binding domain 1 protein
Peptidoglycan-binding domain 1 protein {ECO:0000313|EMBL:AIJ26352.1}; TaxID=1068978 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;"
BSR_Lac_C_na_37513_24
GWC2_Nitrospirae_56_14_curated, Nitrospirae, Bacteria

Not on your lists

comp(27901..28944)
DNA (1044bp) protein (348aa)
Cell wall surface anchor family protein id=4379331 bin=GWC2_Nitrospirae-rel_56_14 species=Bdellovibrio bacteriovorus genus=Bdellovibrio taxon_order=Bdellovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
Tax=GWC2_Nitrospirae_56_14_curated
BSR_Lac_C_na_37513_25
unknown

Not on your lists

comp(28947..29063)
DNA (117bp) protein (39aa)

This feature has no annotations

Displaying 25 items

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