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BSR_Lac_C_na_42035

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Displaying items 1-30 of 38 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BSR_Lac_C_na_42035_1
Lachnospiraceae bacterium 28-4, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(557..967)
DNA (411bp) protein (137aa)
Flavodoxin n=1 Tax=Lachnospiraceae bacterium 28-4 RepID=R9J3R8_9FIRM
Flavodoxin {ECO:0000313|EMBL:EOS28855.1}; TaxID=397287 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 28-4.;"
hypothetical protein
BSR_Lac_C_na_42035_2
Clostridium sp. CAG:273, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1354..1629)
DNA (276bp) protein (92aa)
Histone family protein DNA-binding protein n=1 Tax=Clostridium sp. CAG:273 RepID=R7L7A0_9CLOT
Histone family protein DNA-binding protein {ECO:0000313|EMBL:CDE83881.1}; TaxID=1262789 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:273.;"
hup; DNA-binding protein Hup
BSR_Lac_C_na_42035_3
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1701..3155)
DNA (1455bp) protein (485aa)
MazG family protein n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7IDP3_9FIRM
MazG family protein {ECO:0000313|EMBL:CDE49433.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
nucleotide pyrophosphohydrolase
BSR_Lac_C_na_42035_4
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3177..4799)
DNA (1623bp) protein (541aa)
Polysaccharide biosynthesis protein n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7IC27_9FIRM
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:CDE49434.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
polysaccharide biosynthesis protein
BSR_Lac_C_na_42035_5
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

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5208..6395
DNA (1188bp) protein (396aa)
Putative Na(+)/H(+) antiporter id=2926424 bin=GWF2_Clostridiales_38_85 species=[Clostridium] sticklandii genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
cdu; putative Na(+)/H(+) antiporter
Tax=GWF2_Clostridiales_38_85_curated
BSR_Lac_C_na_42035_6
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6797..7279
DNA (483bp) protein (161aa)
Ribosome maturation factor RimP n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7IFV3_9FIRM
Ribosome maturation factor RimP {ECO:0000256|HAMAP-Rule:MF_01077, ECO:0000256|SAAS:SAAS00001667}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
ribosome maturation factor rimP
BSR_Lac_C_na_42035_7
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7302..8543
DNA (1242bp) protein (414aa)
Transcription termination factor NusA n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7IFA8_9FIRM
Transcription termination/antitermination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
transcription termination factor NusA
BSR_Lac_C_na_42035_8
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8569..8871
DNA (303bp) protein (101aa)
Ribosomal protein L7Ae family protein n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7IFU8_9FIRM
Ribosomal protein L7Ae family protein {ECO:0000313|EMBL:CDE50495.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
hypothetical protein
BSR_Lac_C_na_42035_9
Exiguobacterium sp. AT1b, Exiguobacterium, Bacillales, Bacilli, Firmicutes, Bacteria

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8868..9275
DNA (408bp) protein (136aa)
Ribosomal protein L7Ae/L30e/S12e/Gadd45 n=1 Tax=Exiguobacterium sp. (strain ATCC BAA-1283 / AT1b) RepID=C4L6J0_EXISA
ribosomal protein L7Ae/L30e/S12e/Gadd45
Ribosomal protein L7Ae/L30e/S12e/Gadd45 {ECO:0000313|EMBL:ACQ71869.1}; TaxID=360911 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillales Family XII. Incertae Sedis; Exiguobacterium.;" source="Exiguobacterium sp. (strain ATCC BAA-1283 / AT1b).;"
BSR_Lac_C_na_42035_10
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9272..12367
DNA (3096bp) protein (1032aa)
Translation initiation factor IF-2 n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7IFU1_9FIRM
Translation initiation factor IF-2 {ECO:0000256|HAMAP-Rule:MF_00100, ECO:0000256|RuleBase:RU000644}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
translation initiation factor IF-2
BSR_Lac_C_na_42035_11
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12412..12777
DNA (366bp) protein (122aa)
Ribosome-binding factor A n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7IGM5_9FIRM
Ribosome-binding factor A {ECO:0000256|HAMAP-Rule:MF_00003, ECO:0000256|SAAS:SAAS00023386}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
rbfA; ribosome-binding factor A
BSR_Lac_C_na_42035_12
Clostridium sp. CAG:1024, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12767..13765
DNA (999bp) protein (333aa)
Phosphoesterase RecJ domain protein n=1 Tax=Clostridium sp. CAG:1024 RepID=R5AK49_9CLOT
Phosphoesterase RecJ domain protein {ECO:0000313|EMBL:CCX41177.1}; TaxID=1262770 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1024.;"
phosphoesterase RecJ domain-containing protein
BSR_Lac_C_na_42035_13
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13767..14684
DNA (918bp) protein (306aa)
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylate synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA-uridine isomerase {ECO:0000256|HAMAP-Rule:MF_01080}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
tRNA pseudouridine synthase B (EC:4.2.1.70)
tRNA pseudouridine synthase B n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7IFT6_9FIRM
BSR_Lac_C_na_42035_14
Thermosinus carboxydivorans, Thermosinus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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14715..15521
DNA (807bp) protein (269aa)
Riboflavin biosynthesis protein {ECO:0000256|PIRNR:PIRNR004491}; EC=2.7.1.26 {ECO:0000256|PIRNR:PIRNR004491};; EC=2.7.7.2 {ECO:0000256|PIRNR:PIRNR004491};; TaxID=401526 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Thermosinus.;" source="Thermosinus carboxydivorans Nor1.;"
riboflavin biosynthesis protein RibF (EC:2.7.1.26 2.7.7.2)
Riboflavin biosynthesis protein RibF n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HSB8_9FIRM
BSR_Lac_C_na_42035_15
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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15915..16169
DNA (255bp) protein (85aa)
30S ribosomal protein S15 n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7IMD8_9FIRM
30S ribosomal protein S15 {ECO:0000256|HAMAP-Rule:MF_01343, ECO:0000256|RuleBase:RU003920}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
30S ribosomal protein S15
BSR_Lac_C_na_42035_16
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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16220..18514
DNA (2295bp) protein (765aa)
Polyribonucleotide nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_01595}; EC=2.7.7.8 {ECO:0000256|HAMAP-Rule:MF_01595};; Polynucleotide phosphorylase {ECO:0000256|HAMAP-Rule:MF_01595}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
Polyribonucleotide nucleotidyltransferase n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7IJZ5_9FIRM
polyribonucleotide nucleotidyltransferase
BSR_Lac_C_na_42035_17
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18692..19939
DNA (1248bp) protein (416aa)
Processing peptidase n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7IJI2_9FIRM
Processing peptidase {ECO:0000313|EMBL:CDE51760.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
peptidase M16 domain-containing protein
BSR_Lac_C_na_42035_18
Moorella glycerini, Moorella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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19945..20322
DNA (378bp) protein (126aa)
Uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=F8I6I9_SULAT
Genome assembly strain_NMP_1 {ECO:0000313|EMBL:CEP66819.1}; TaxID=55779 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Moorella group; Moorella.;" source="Moorella glycerini.;"
dUTPase
BSR_Lac_C_na_42035_19
Veillonella sp. CAG:933, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(20632..21063)
DNA (432bp) protein (144aa)
MarR family transcriptional regulator n=1 Tax=Butyrivibrio sp. AE3009 RepID=UPI0003B669EE
Transcriptional regulator MarR family {ECO:0000313|EMBL:CCX56717.1}; TaxID=1262980 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella; environmental samples.;" source="Veillonella sp. CAG:933.;"
MarR family transcriptional regulator
BSR_Lac_C_na_42035_20
BJP_IG2157_Clostridiales_52_13, Dethiosulfatibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21093..21566)
DNA (474bp) protein (158aa)
Glutathione peroxidase n=3 Tax=Lactococcus garvieae RepID=F9V8D8_LACGT
glutathione peroxidase
Tax=BJP_IG2157_Clostridiales_52_13
BSR_Lac_C_na_42035_21
BJP_IG2157_Clostridiales_52_13, Dethiosulfatibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21961..23781
DNA (1821bp) protein (607aa)
Fatty acid-binding protein DegV n=1 Tax=Youngiibacter fragilis 232.1 RepID=V7IAB2_9CLOT
degV family protein
Tax=BJP_IG2157_Clostridiales_52_13
BSR_Lac_C_na_42035_22
BJP_IG2157_Clostridiales_52_13, Dethiosulfatibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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23778..24554
DNA (777bp) protein (259aa)
Putative uncharacterized protein n=1 Tax=Clostridium sticklandii (strain ATCC 12662 / DSM 519 / JCM 1433 / NCIB 10654) RepID=E3PWH7_CLOSD
conserved membrane protein of unknown function
Tax=BJP_IG2157_Clostridiales_52_13
BSR_Lac_C_na_42035_23
BJP_IG2157_Clostridiales_52_13, Dethiosulfatibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24558..24974
DNA (417bp) protein (139aa)
hypothetical protein n=1 Tax=Hydrogenedentes bacterium JGI 0000039-J10 RepID=UPI00035DEEA9
conserved membrane protein of unknown function
Tax=BJP_IG2157_Clostridiales_52_13
BSR_Lac_C_na_42035_24
BJP_IG2069_Clostridiales_48_15, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25617..26756
DNA (1140bp) protein (380aa)
Branched-chain amino acid ABC transporter substrate binding component n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) PF8_BIFLS">RepID=B7GPF8_BIFLS
branched-chain amino acid ABC transporter substrate-binding protein
Tax=BJP_IG2069_Clostridiales_48_15
BSR_Lac_C_na_42035_25
Bifidobacterium mongoliense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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27005..27916
DNA (912bp) protein (304aa)
Branched-chain amino acid transport system permease protein livH n=5 Tax=Bifidobacterium breve RepID=F9Y2R6_BIFBU
Branched-chain amino acid ABC transporter permease {ECO:0000313|EMBL:KFI74136.1}; TaxID=1437603 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium mongoliense DSM 21395.;"
Branched-chain amino acid transport system permease protein livH
BSR_Lac_C_na_42035_26
Bifidobacterium mongoliense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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27926..28981
DNA (1056bp) protein (352aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AHE4_CLOBU
Branched-chain amino acid ABC transporter permease {ECO:0000313|EMBL:KFI74135.1}; TaxID=1437603 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium mongoliense DSM 21395.;"
permease of ABC transporter for branched-chain amino acids
BSR_Lac_C_na_42035_27
BJP_IG2157_Clostridiales_52_13, Dethiosulfatibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28984..29748
DNA (765bp) protein (255aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AUT3_CLOBU
branched-chain amino acid ABC transporter
Tax=BJP_IG2157_Clostridiales_52_13
BSR_Lac_C_na_42035_28
BJP_IG2069_Clostridiales_48_15, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29760..30464
DNA (705bp) protein (235aa)
Uncharacterized protein n=1 Tax=Anaerotruncus sp. G3(2012) RepID=R9LLZ1_9FIRM
branched-chain amino acid ABC transporter ATP-binding protein
Tax=BJP_IG2069_Clostridiales_48_15
BSR_Lac_C_na_42035_29
Oscillibacter valericigenes, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30704..32332
DNA (1629bp) protein (543aa)
hydroxylamine reductase (EC:1.7.-.-)
Hydroxylamine reductase {ECO:0000256|HAMAP-Rule:MF_00069, ECO:0000256|SAAS:SAAS00038686}; EC=1.7.99.1 {ECO:0000256|HAMAP-Rule:MF_00069, ECO:0000256|SAAS:SAAS00150119};; Hybrid-cluster protein {ECO:0000256|HAMAP-Rule:MF_00069}; Prismane protein {ECO:0000256|HAMAP-Rule:MF_00069}; TaxID=693746 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 /; Sjm18-20).;"
Hydroxylamine reductase n=1 Tax=Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 / Sjm18-20) RepID=G4KV55_OSCVS
BSR_Lac_C_na_42035_30
Anaerotruncus sp. G3(2012), Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32353..32541
DNA (189bp) protein (63aa)
Uncharacterized protein n=1 Tax=Anaerotruncus sp. G3(2012) RepID=R9LDF2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS56406.1}; TaxID=1235835 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus sp. G3(2012).;"
hypothetical protein
Displaying items 1-30 of 38 in total

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