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BSR_Lac_C_na_111971

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Displaying items 1-30 of 205 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BSR_Lac_C_na_111971_1
Desulfotomaculum gibsoniae, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(567..2606)
DNA (2040bp) protein (680aa)
PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Desulfotomaculum gibsoniae DSM 7213 RepID=R4KJP8_9FIRM
PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein
PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:AGL02854.1}; Flags: Precursor;; TaxID=767817 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum gibsoniae DSM 7213.;"
BSR_Lac_C_na_111971_2
BJP_IG2157_Clostridiales_52_13, Dethiosulfatibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2641..5709)
DNA (3069bp) protein (1023aa)
Response regulator n=1 Tax=Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM 8532 / NCIMB 11754) RepID=L7VN44_CLOSH
response regulator
Tax=BJP_IG2157_Clostridiales_52_13
BSR_Lac_C_na_111971_3
Oscillibacter valericigenes, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6295..6726)
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 / Sjm18-20) RepID=G4KW48_OSCVS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAK98270.1}; TaxID=693746 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 /; Sjm18-20).;"
BSR_Lac_C_na_111971_4
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

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6872..7564
DNA (693bp) protein (231aa)
Two component transcriptional regulator, winged helix family id=4129494 bin=GWF2_Clostridiales_38_85 species=unknown genus=Desulfitobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
response regulator with CheY-like receiver domain and winged-helix DNA-binding domain
Tax=GWF2_Clostridiales_38_85_curated
BSR_Lac_C_na_111971_5
Desulfitobacterium hafniense, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7561..9042
DNA (1482bp) protein (494aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=537010 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" source="Desulfitobacterium hafniense DP7.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Desulfitobacterium hafniense DP7 RepID=G9XRR9_DESHA
histidine kinase
BSR_Lac_C_na_111971_6
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9307..10365
DNA (1059bp) protein (353aa)
Site-specific recombinase phage integrase family n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7ILG9_9FIRM
Site-specific recombinase phage integrase family {ECO:0000313|EMBL:CDE51472.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
integrase
BSR_Lac_C_na_111971_7
BJP_08E140C01_Spirochaeta_53_29, Spirochaeta, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

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comp(10493..11641)
DNA (1149bp) protein (383aa)
Putative uncharacterized protein id=4883740 bin=GWC2_Spirochaete_52_13 species=Clostridium ultunense genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
hypothetical protein
Tax=BJP_08E140C01_Spirochaeta_53_29
BSR_Lac_C_na_111971_8
Spirochaeta sp. JC230, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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comp(12478..12786)
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Desulfitobacterium dehalogenans (strain ATCC 51507 / DSM 9161 / JW/IU-DC1) RepID=I4A481_DESDJ
Uncharacterized protein {ECO:0000313|EMBL:KGE72714.1}; TaxID=1480694 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Spirochaeta sp. JC230.;"
hypothetical protein
BSR_Lac_C_na_111971_9
Acetonema longum, Acetonema, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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13077..13421
DNA (345bp) protein (115aa)
Cupin 2 domain-containing protein n=1 Tax=Acetonema longum DSM 6540 RepID=F7NIP5_9FIRM
Cupin 2 domain-containing protein {ECO:0000313|EMBL:EGO64109.1}; TaxID=1009370 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Acetonema.;" source="Acetonema longum DSM 6540.;"
hypothetical protein
BSR_Lac_C_na_111971_10
Moorella glycerini, Moorella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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13928..14497
DNA (570bp) protein (190aa)
Genome assembly strain_NMP_1 {ECO:0000313|EMBL:CEP67090.1}; TaxID=55779 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Moorella group; Moorella.;" source="Moorella glycerini.;"
BSR_Lac_C_na_111971_trna_5
unknown

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comp(14179..14249)
DNA (71bp)
transferRNA Gly
BSR_Lac_C_na_111971_trna_4
unknown

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comp(14306..14377)
DNA (72bp)
transferRNA Gly
BSR_Lac_C_na_111971_trna_3
unknown

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comp(14412..14492)
DNA (81bp)
transferRNA Leu
BSR_Lac_C_na_111971_11
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14773..15504)
DNA (732bp) protein (244aa)
Plasmid maintenance system antidote protein XRE family n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7I8K4_9FIRM
Plasmid maintenance system antidote protein XRE family {ECO:0000313|EMBL:CDE46837.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
XRE family transcriptional regulator
BSR_Lac_C_na_111971_12
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15726..15989
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7I7Z2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE46632.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
hypothetical protein
BSR_Lac_C_na_111971_13
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15993..17180
DNA (1188bp) protein (396aa)
putative RNA helicase (EC:3.6.1.-)
DEAD/DEAH box helicase n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7I5V1_9FIRM
DEAD/DEAH box helicase {ECO:0000313|EMBL:CDE46628.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
BSR_Lac_C_na_111971_14
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17196..17942
DNA (747bp) protein (249aa)
F420-0:Gamma-glutamyl ligase n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7I9S4_9FIRM
F420-0:Gamma-glutamyl ligase {ECO:0000313|EMBL:CDE48644.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
hypothetical protein
BSR_Lac_C_na_111971_15
BJP_IG2069_Clostridiales_48_15, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(18135..19415)
DNA (1281bp) protein (427aa)
O-acetylhomoserine/O-acetylserine sulfhydrylase n=1 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9T746_9EURY
O-acetylhomoserine/O-acetylserine sulfhydrylase
Tax=BJP_IG2069_Clostridiales_48_15
BSR_Lac_C_na_111971_16
Oxalobacter formigenes, Oxalobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(19648..20085)
DNA (438bp) protein (146aa)
Rrf2 family protein n=1 Tax=Oxalobacter formigenes HOxBLS RepID=C3X3Z1_OXAFO
Rrf2 family protein {ECO:0000313|EMBL:EEO27927.1}; TaxID=556268 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Oxalobacter.;" source="Oxalobacter formigenes HOxBLS.;"
asnc family transcriptional regulator
BSR_Lac_C_na_111971_17
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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20256..21389
DNA (1134bp) protein (378aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GEN3_GEOUR
NAD-dependent epimerase/dehydratase
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:ABQ25888.1}; TaxID=351605 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
BSR_Lac_C_na_111971_18
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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21391..22533
DNA (1143bp) protein (381aa)
UDP-N-acetylglucosamine 2-epimerase (EC:5.1.3.14)
UDP-N-acetylglucosamine 2-epimerase n=1 Tax=Coprobacillus sp. 29_1 RepID=E7G9I0_9FIRM
UDP-N-acetylglucosamine 2-epimerase {ECO:0000313|EMBL:EFW05274.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
BSR_Lac_C_na_111971_19
unknown

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22651..24267
DNA (1617bp) protein (539aa)

This feature has no annotations

BSR_Lac_C_na_111971_20
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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24535..26022
DNA (1488bp) protein (496aa)
L-fucose isomerase-like protein n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MTY2_CLOSA
L-fucose isomerase-like protein
L-fucose isomerase-like protein {ECO:0000313|EMBL:AGX44259.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
BSR_Lac_C_na_111971_21
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(26581..27654)
DNA (1074bp) protein (358aa)
6-phosphofructokinase (EC:2.7.1.11)
6-phosphofructokinase n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7IIA6_9FIRM
6-phosphofructokinase 1 {ECO:0000313|EMBL:CDE51345.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
BSR_Lac_C_na_111971_22
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27788..28372
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7IIR3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE51346.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
hypothetical protein
BSR_Lac_C_na_111971_23

Not on your lists

28480..29940
DNA (1461bp) protein (487aa)
Glycerol-3-phosphate dehydrogenase n=2 Tax=Clostridium botulinum RepID=C5VNL2_CLOBO
Glycerol-3-phosphate dehydrogenase {ECO:0000313|EMBL:AHF24411.1}; TaxID=1393505 species="Bacteria; environmental samples.;" source="uncultured bacterium Contig1761.;"
FAD-dependent oxidoreductase
BSR_Lac_C_na_111971_24

Not on your lists

29933..31240
DNA (1308bp) protein (436aa)
Pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2EBA9_9FIRM
Pyridine nucleotide-disulfide oxidoreductase family protein {ECO:0000313|EMBL:AHF24412.1}; TaxID=1393505 species="Bacteria; environmental samples.;" source="uncultured bacterium Contig1761.;"
sarcosine oxidase alpha subunit
BSR_Lac_C_na_111971_25
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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31228..31608
DNA (381bp) protein (127aa)
Uncharacterized protein with conserved CXXC pairs n=3 Tax=Clostridium RepID=D6DMA7_CLOSC
Uncharacterized protein with conserved CXXC pairs
Uncharacterized protein with conserved CXXC pairs {ECO:0000313|EMBL:CBK78831.1}; TaxID=717608 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] cf. saccharolyticum K10.;"
BSR_Lac_C_na_111971_26
Desulfomonile tiedjei, Desulfomonile, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(31728..32747)
DNA (1020bp) protein (340aa)
ketopantoate reductase (EC:1.1.1.169)
2-dehydropantoate 2-reductase {ECO:0000256|RuleBase:RU003776}; EC=1.1.1.169 {ECO:0000256|RuleBase:RU003776};; Flags: Precursor;; TaxID=706587 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Desulfomonile.;" source="Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1).;"
2-dehydropantoate 2-reductase n=1 Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4CCJ7_DESTA
BSR_Lac_C_na_111971_27
Lysinibacillus varians, Lysinibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(32870..33724)
DNA (855bp) protein (285aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HGX7_9CLOT
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:AHN21519.1}; TaxID=1145276 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Lysinibacillus.;" source="Lysinibacillus varians.;"
Displaying items 1-30 of 205 in total

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