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BSR_Lac_LFCR_na_at_110271

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Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BSR_Lac_LFCR_na_at_110271_1
Anaerofustis stercorihominis, Anaerofustis, Clostridiales, Clostridia, Firmicutes, Bacteria

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3..1760
DNA (1758bp) protein (586aa)
Primosomal protein N' {ECO:0000256|HAMAP-Rule:MF_00983}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00983};; ATP-dependent helicase PriA {ECO:0000256|HAMAP-Rule:MF_00983}; TaxID=445971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Anaerofustis.;" source="Anaerofustis stercorihominis DSM 17244.;"
Primosomal protein N n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1C5S0_9FIRM
primosomal protein N'
BSR_Lac_LFCR_na_at_110271_2
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1767..2276
DNA (510bp) protein (170aa)
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
def; peptide deformylase (EC:3.5.1.88)
peptide deformylase n=1 Tax=Clostridium tyrobutyricum RepID=UPI0003144105
BSR_Lac_LFCR_na_at_110271_3
Anaerofustis stercorihominis, Anaerofustis, Clostridiales, Clostridia, Firmicutes, Bacteria

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2295..3224
DNA (930bp) protein (310aa)
Methionyl-tRNA formyltransferase {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00043680}; EC=2.1.2.9 {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00150580};; TaxID=445971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Anaerofustis.;" source="Anaerofustis stercorihominis DSM 17244.;"
Methionyl-tRNA formyltransferase n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1C5S2_9FIRM
Fmt; methionyl-tRNA formyltransferase
BSR_Lac_LFCR_na_at_110271_4
Thermoanaerobacter wiegelii, Thermoanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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3246..3938
DNA (693bp) protein (231aa)
Peptidase membrane zinc metallopeptidase n=1 Tax=Thermoanaerobacter wiegelii Rt8.B1 RepID=G2MR82_9THEO
peptidase membrane zinc metallopeptidase
Peptidase membrane zinc metallopeptidase {ECO:0000313|EMBL:AEM78879.1}; Flags: Precursor;; TaxID=697303 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Thermoanaerobacter.;" source="Thermoanaerobacter wiegelii Rt8.B1.;"
BSR_Lac_LFCR_na_at_110271_5
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3931..5262
DNA (1332bp) protein (444aa)
Ribosomal RNA small subunit methyltransferase B {ECO:0000256|SAAS:SAAS00013752}; EC=2.1.1.- {ECO:0000256|SAAS:SAAS00276898};; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
Ribosomal RNA small subunit methyltransferase B n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5XGB7_9CLOT
sun protein
BSR_Lac_LFCR_na_at_110271_6
Clostridium tetanomorphum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5313..6341
DNA (1029bp) protein (343aa)
Probable dual-specificity RNA methyltransferase RlmN {ECO:0000256|HAMAP-Rule:MF_01849}; EC=2.1.1.192 {ECO:0000256|HAMAP-Rule:MF_01849};; 23S rRNA (adenine(2503)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; 23S rRNA m2A2503 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; Ribosomal RNA large subunit methyltransferase N {ECO:0000256|HAMAP-Rule:MF_01849}; tRNA (adenine(37)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; tRNA m2A37 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; TaxID=1230342 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium tetanomorphum DSM 665.;"
Probable dual-specificity RNA methyltransferase RlmN n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1C5S5_9FIRM
ribosomal RNA large subunit methyltransferase N
BSR_Lac_LFCR_na_at_110271_7
Clostridium ljungdahlii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6345..7091
DNA (747bp) protein (249aa)
protein phosphatase (EC:3.1.3.-)
Predicted protein phosphatase n=2 Tax=Clostridium RepID=D8GRX6_CLOLD
Uncharacterized protein {ECO:0000313|EMBL:ADK14329.1}; TaxID=748727 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ljungdahlii (strain ATCC 55383 / DSM 13528 / PETC).;"
BSR_Lac_LFCR_na_at_110271_8
Anaerofustis stercorihominis, Anaerofustis, Clostridiales, Clostridia, Firmicutes, Bacteria

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7078..9012
DNA (1935bp) protein (645aa)
prkC; serine/threonine-protein kinase PrkC (EC:2.7.11.1)
Kinase domain protein n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1C5S7_9FIRM
Kinase domain protein {ECO:0000313|EMBL:EDS73641.1}; TaxID=445971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Anaerofustis.;" source="Anaerofustis stercorihominis DSM 17244.;"
BSR_Lac_LFCR_na_at_110271_9
Clostridium sp. CAG:411, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9022..9897
DNA (876bp) protein (292aa)
Putative ribosome biogenesis GTPase RsgA {ECO:0000256|HAMAP-Rule:MF_01820}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_01820};; TaxID=1262802 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:411.;"
ribosome small subunit-dependent GTPase A (EC:3.6.1.-)
Putative ribosome biogenesis GTPase RsgA n=1 Tax=Clostridium sp. CAG:411 RepID=R7HWJ9_9CLOT
BSR_Lac_LFCR_na_at_110271_10
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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9894..10538
DNA (645bp) protein (215aa)
Thiamine pyrophosphokinase n=1 Tax=Caldanaerobacter subterraneus subsp. yonseiensis KB-1 RepID=U5CRL0_THEYO
Thiamine pyrophosphokinase {ECO:0000313|EMBL:ERM92394.1}; TaxID=1388761 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Caldanaerobacter subterraneus subsp. yonseiensis KB-1.;"
Thi80; thiamine pyrophosphokinase
BSR_Lac_LFCR_na_at_110271_11
Pseudoramibacter alactolyticus, Pseudoramibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10855..11043)
DNA (189bp) protein (63aa)
50S ribosomal protein L28 n=1 Tax=Pseudoramibacter alactolyticus ATCC 23263 RepID=E6MJ97_9FIRM
50S ribosomal protein L28 {ECO:0000256|HAMAP-Rule:MF_00373}; TaxID=887929 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Pseudoramibacter.;" source="Pseudoramibacter alactolyticus ATCC 23263.;"
rpmB; ribosomal protein L28
BSR_Lac_LFCR_na_at_110271_12
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11208..11552
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Clostridium ultunense Esp RepID=M1YSW3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCQ93645.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;"
hypothetical protein
BSR_Lac_LFCR_na_at_110271_13
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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11573..13195
DNA (1623bp) protein (541aa)
Dihydroxyacetone kinase family protein n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1AV63_9CLOT
Dihydroxyacetone kinase family protein {ECO:0000313|EMBL:EOD00522.1}; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacter kiritimatiensis.;"
putative phosphatase
BSR_Lac_LFCR_na_at_110271_14
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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13206..15260
DNA (2055bp) protein (685aa)
recG; RecG (EC:3.6.4.12)
ATP-dependent DNA helicase RecG n=1 Tax=Acetivibrio cellulolyticus RepID=UPI0001E2F625
ATP-dependent DNA helicase RecG {ECO:0000313|EMBL:EOD00523.1}; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacter kiritimatiensis.;"
BSR_Lac_LFCR_na_at_110271_15
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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15271..15813
DNA (543bp) protein (181aa)
RNA methyltransferase, RsmD family {ECO:0000313|EMBL:EQK45181.1}; EC=2.1.1.- {ECO:0000313|EMBL:EQK45181.1};; TaxID=1233170 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] bifermentans ATCC 19299.;"
RNA methyltransferase, RsmD family n=2 Tax=Clostridium bifermentans RepID=T4VJC8_CLOBI
rna methyltransferase, rsmd family
BSR_Lac_LFCR_na_at_110271_16
Clostridium sp. BNL1100, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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15813..16298
DNA (486bp) protein (162aa)
Phosphopantetheine adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109024}; EC=2.7.7.3 {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109037};; Dephospho-CoA pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00151}; Pantetheine-phosphate adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151}; TaxID=755731 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. BNL1100.;"
Phosphopantetheine adenylyltransferase n=1 Tax=Clostridium sp. BNL1100 RepID=H2JDN1_9CLOT
pantetheine-phosphate adenylyltransferase
BSR_Lac_LFCR_na_at_110271_17
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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16295..16789
DNA (495bp) protein (165aa)
Archaeal/vacuolar-type H+-ATPase subunit H n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CQD9_9CLOT
Archaeal/vacuolar-type H+-ATPase subunit H {ECO:0000313|EMBL:EOD00886.1}; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacter kiritimatiensis.;"
hypothetical protein
BSR_Lac_LFCR_na_at_110271_18
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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comp(16786..17760)
DNA (975bp) protein (325aa)
Sporulation integral membrane protein YlbJ n=1 Tax=Carboxydibrachium pacificum DSM 12653 RepID=B7R9T3_9THEO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAM24703.1}; TaxID=273068 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Caldanaerobacter subterraneus subsp. tengcongensis (strain DSM 15242 /; JCM 11007 / NBRC 100824 / MB4) (Thermoanaerobacter tengcongensis).;"
BSR_Lac_LFCR_na_at_110271_19
Caloramator australicus, Caloramator, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(17832..19067)
DNA (1236bp) protein (412aa)
hypothetical protein AcelC_11971 id=1963538 bin=GWB2_Clostridiales_37_7 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_Clostridiales_37_7 organism_group=Firmicute organism_desc=Good +
UPF0348 protein CAAU_2471 {ECO:0000256|HAMAP-Rule:MF_01539}; TaxID=857293 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloramator.;" source="Caloramator australicus RC3.;"
hypothetical protein
BSR_Lac_LFCR_na_at_110271_20
Fervidicella metallireducens, Fervidicella, Clostridiales, Clostridia, Firmicutes, Bacteria

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19166..20362
DNA (1197bp) protein (399aa)
Acetate kinase {ECO:0000256|HAMAP-Rule:MF_00020}; EC=2.7.2.1 {ECO:0000256|HAMAP-Rule:MF_00020};; Acetokinase {ECO:0000256|HAMAP-Rule:MF_00020}; TaxID=1403537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Fervidicella.;" source="Fervidicella metallireducens AeB.;"
Acetate kinase n=1 Tax=Thermobrachium celere DSM 8682 RepID=R7RPB7_9CLOT
acetate kinase
BSR_Lac_LFCR_na_at_110271_21
[Clostridium] clariflavum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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20426..20914
DNA (489bp) protein (163aa)
Putative metal-binding protein, possibly nucleic-acid binding protein n=1 Tax=Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45) RepID=G8M0L1_CLOCD
putative metal-binding protein, possibly nucleic-acid binding protein
Putative metal-binding protein, possibly nucleic-acid binding protein {ECO:0000313|EMBL:AEV69092.1}; TaxID=720554 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45).;"
BSR_Lac_LFCR_na_at_110271_22
Anaerofustis stercorihominis, Anaerofustis, Clostridiales, Clostridia, Firmicutes, Bacteria

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20918..21100
DNA (183bp) protein (61aa)
50S ribosomal protein L32 n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1C6B8_9FIRM
50S ribosomal protein L32 {ECO:0000256|HAMAP-Rule:MF_00340}; TaxID=445971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Anaerofustis.;" source="Anaerofustis stercorihominis DSM 17244.;"
protein RpmF
BSR_Lac_LFCR_na_at_110271_23
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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21216..22220
DNA (1005bp) protein (335aa)
Phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_00019, ECO:0000256|SAAS:SAAS00054336}; EC=2.3.1.n2 {ECO:0000256|HAMAP-Rule:MF_00019, ECO:0000256|SAAS:SAAS00054327};; Acyl-ACP phosphotransacylase {ECO:0000256|HAMAP-Rule:MF_00019}; Acyl-[acyl-carrier-protein]--phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_00019}; Phosphate-acyl-ACP acyltransferase {ECO:0000256|HAMAP-Rule:MF_00019}; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacter kiritimatiensis.;"
Phosphate acyltransferase n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1AV90_9CLOT
hypothetical protein
BSR_Lac_LFCR_na_at_110271_24
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22269..22493
DNA (225bp) protein (75aa)
Acyl carrier protein n=2 Tax=Clostridiales RepID=D4M3B7_9FIRM
acyl carrier protein
Acyl carrier protein {ECO:0000256|HAMAP-Rule:MF_01217, ECO:0000256|RuleBase:RU003545}; Short=ACP {ECO:0000256|HAMAP-Rule:MF_01217};; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
BSR_Lac_LFCR_na_at_110271_25
R_Dadabacteria_53_21, Dadabacteria, Bacteria

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22602..23288
DNA (687bp) protein (229aa)
rnase iii (EC:3.1.26.3)
ribonuclease III (EC:3.1.26.3); K03685 ribonuclease III [EC:3.1.26.3] id=14426013 bin=bin1_lowGC species=Cellulosilyticum lentocellum genus=Cellulosilyticum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin1_lowGC organism_group=Unknown_CP
Tax=RIFCSPHIGHO2_12_FULL_Dadabacteria_53_21_curated
BSR_Lac_LFCR_na_at_110271_26
Anaerofustis stercorihominis, Anaerofustis, Clostridiales, Clostridia, Firmicutes, Bacteria

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23318..26728
DNA (3411bp) protein (1137aa)
Chromosome partition protein Smc n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1C8X9_9FIRM
Chromosome partition protein Smc {ECO:0000256|HAMAP-Rule:MF_01894}; TaxID=445971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Anaerofustis.;" source="Anaerofustis stercorihominis DSM 17244.;"
smc; chromosome segregation protein Smc
BSR_Lac_LFCR_na_at_110271_27
Anaerofustis stercorihominis, Anaerofustis, Clostridiales, Clostridia, Firmicutes, Bacteria

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26739..27641
DNA (903bp) protein (301aa)
Signal recognition particle receptor FtsY n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1C8Y0_9FIRM
Signal recognition particle receptor FtsY {ECO:0000256|HAMAP-Rule:MF_00920}; Short=SRP receptor {ECO:0000256|HAMAP-Rule:MF_00920};; TaxID=445971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Anaerofustis.;" source="Anaerofustis stercorihominis DSM 17244.;"
signal recognition particle-docking protein FtsY
BSR_Lac_LFCR_na_at_110271_28
Thauera sp. 63, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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27683..27922
DNA (240bp) protein (80aa)
2-oxopent-4-enoate hydratase n=1 Tax=Thauera sp. 63 RepID=N6XD78_9RHOO
2-oxopent-4-enoate hydratase {ECO:0000313|EMBL:ENO79721.1}; TaxID=497321 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. 63.;"
2-hydroxypent-2,4-dienoate hydratase
Displaying 28 items

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