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BSR_Lac_LFCR_na_at_87737

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Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BSR_Lac_LFCR_na_at_87737_1
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3..899)
DNA (897bp) protein (299aa)
Spore germination protein GerM n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0AXG1_CLOA9
Spore gernimation protein GerM {ECO:0000313|EMBL:KGG80400.1}; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaerobacter.;" source="Caloranaerobacter azorensis H53214.;"
gerM; spore germination protein GerM
BSR_Lac_LFCR_na_at_87737_2
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(971..1942)
DNA (972bp) protein (324aa)
Hydrogenase maturation factor n=1 Tax=Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM 8532 / NCIMB 11754) RepID=M4Y5B9_CLOSH
AIR synthase {ECO:0000313|EMBL:KGG80402.1}; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaerobacter.;" source="Caloranaerobacter azorensis H53214.;"
hypE; hydrogenase maturation factor HypE
BSR_Lac_LFCR_na_at_87737_3
Caldalkalibacillus thermarum, Caldalkalibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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2141..2359
DNA (219bp) protein (73aa)
Putative uncharacterized protein n=1 Tax=Caldalkalibacillus thermarum TA2.A1 RepID=F5L833_9BACI
Uncharacterized protein {ECO:0000313|EMBL:EGL82541.1}; TaxID=986075 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Caldalkalibacillus.;" source="Caldalkalibacillus thermarum TA2.A1.;"
hypothetical protein
BSR_Lac_LFCR_na_at_87737_4
unknown

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2614..2793
DNA (180bp) protein (60aa)

This feature has no annotations

BSR_Lac_LFCR_na_at_87737_5
Pelosinus fermentans, Pelosinus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(2851..3375)
DNA (525bp) protein (175aa)
YbaK/prolyl-tRNA synthetase associated region n=1 Tax=Pelosinus fermentans JBW45 RepID=I9D9W7_9FIRM
YbaK/prolyl-tRNA synthetase associated region
YbaK/prolyl-tRNA synthetase associated region {ECO:0000313|EMBL:AJQ25630.1}; TaxID=1192197 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Pelosinus.;" source="Pelosinus fermentans JBW45.;"
BSR_Lac_LFCR_na_at_87737_6
Caloramator australicus, Caloramator, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3372..3791)
DNA (420bp) protein (140aa)
Mini-ribonuclease 3 {ECO:0000256|HAMAP-Rule:MF_01468}; Short=Mini-3 {ECO:0000256|HAMAP-Rule:MF_01468};; Short=Mini-RNase 3 {ECO:0000256|HAMAP-Rule:MF_01468};; EC=3.1.26.- {ECO:0000256|HAMAP-Rule:MF_01468};; Mini-RNase III {ECO:0000256|HAMAP-Rule:MF_01468}; TaxID=857293 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloramator.;" source="Caloramator australicus RC3.;"
Mini-ribonuclease 3 n=1 Tax=Caloramator australicus RC3 RepID=I7KA23_9CLOT
ribonuclease III
BSR_Lac_LFCR_na_at_87737_7
Eubacterium limosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3776..5173)
DNA (1398bp) protein (466aa)
Cysteine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043703}; EC=6.1.1.16 {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043714};; Cysteinyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00041}; TaxID=903814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium limosum (strain KIST612).;"
Cysteine--tRNA ligase n=1 Tax=Eubacterium limosum (strain KIST612) RepID=E3GKQ8_EUBLK
cysteinyl-tRNA synthetase
BSR_Lac_LFCR_na_at_87737_8
Caloramator australicus, Caloramator, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5187..5663)
DNA (477bp) protein (159aa)
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395}; Short=MECDP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPS {ECO:0000256|HAMAP-Rule:MF_00107};; EC=4.6.1.12 {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395};; TaxID=857293 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloramator.;" source="Caloramator australicus RC3.;"
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=1 Tax=Caloramator australicus RC3 RepID=I7LKC9_9CLOT
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
BSR_Lac_LFCR_na_at_87737_9

Not on your lists

comp(5666..5977)
DNA (312bp) protein (104aa)
Uncharacterized protein n=1 Tax=Thermosediminibacter oceani (strain ATCC BAA-1034 / DSM 16646 / JW/IW-1228P) RepID=D9RXV7_THEOJ
Marine sediment metagenome DNA, contig: S01H4_C02914 {ECO:0000313|EMBL:GAG69963.1}; Marine sediment metagenome DNA, contig: S03H2_C03121 {ECO:0000313|EMBL:GAH20680.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
BSR_Lac_LFCR_na_at_87737_10
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5991..6968)
DNA (978bp) protein (326aa)
UPI0003D59ACB related cluster n=1 Tax=unknown RepID=UPI0003D59ACB
Uncharacterized protein {ECO:0000313|EMBL:ETI92295.1}; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
pyruvate dehydrogenase
BSR_Lac_LFCR_na_at_87737_11
Sebaldella termitidis, Sebaldella, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

comp(6979..7944)
DNA (966bp) protein (322aa)
pyruvate dehydrogenase (acetyl-transferring) (EC:1.2.4.1)
Pyruvate dehydrogenase (Acetyl-transferring) {ECO:0000313|EMBL:ACZ10606.1}; EC=1.2.4.1 {ECO:0000313|EMBL:ACZ10606.1};; TaxID=526218 species="Bacteria; Fusobacteria; Fusobacteriales; Leptotrichiaceae; Sebaldella.;" source="Sebaldella termitidis (strain ATCC 33386 / NCTC 11300).;"
Pyruvate dehydrogenase (Acetyl-transferring) n=1 Tax=Sebaldella termitidis (strain ATCC 33386 / NCTC 11300) RepID=D1ARX0_SEBTE
BSR_Lac_LFCR_na_at_87737_12
Clostridium kluyveri, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7959..8669)
DNA (711bp) protein (237aa)
ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC:2.7.7.60)
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase {ECO:0000255|HAMAP-Rule:MF_00108}; EC=2.7.7.60 {ECO:0000255|HAMAP-Rule:MF_00108};; 4-diphosphocytidyl-2C-methyl-D-erythritol synthase {ECO:0000255|HAMAP-Rule:MF_00108}; MEP cytidylyltransferase {ECO:0000255|HAMAP-Rule:MF_00108}; Short=MCT {ECO:0000255|HAMAP-Rule:MF_00108};; TaxID=583346 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium kluyveri (strain NBRC 12016).;"
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase n=2 Tax=Clostridium kluyveri RepID=ISPD_CLOK1
BSR_Lac_LFCR_na_at_87737_13
Anaerofustis stercorihominis, Anaerofustis, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8666..9757)
DNA (1092bp) protein (364aa)
PIN domain protein n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1C8K4_9FIRM
PIN domain protein {ECO:0000313|EMBL:EDS71914.1}; TaxID=445971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Anaerofustis.;" source="Anaerofustis stercorihominis DSM 17244.;"
PilT protein domain-containing protein
BSR_Lac_LFCR_na_at_87737_14
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9777..10238)
DNA (462bp) protein (154aa)
Transcriptional regulator CarD family n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6ERW0_9FIRM
CarD family transcriptional regulator {ECO:0000313|EMBL:KGG80111.1}; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaerobacter.;" source="Caloranaerobacter azorensis H53214.;"
CarD family transcriptional regulator
BSR_Lac_LFCR_na_at_87737_15
Desulfotomaculum hydrothermale, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10439..10810
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Desulfotomaculum hydrothermale Lam5 = DSM 18033 RepID=K8DYE6_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCO07765.1}; TaxID=1121428 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum hydrothermale Lam5 = DSM 18033.;"
BSR_Lac_LFCR_na_at_87737_16
RIFOXYD2_FULL_Deltaproteobacteria_66_9_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11423..11791)
DNA (369bp) protein (123aa)
Fe-S iron-sulfur cluster assembly protein NifU family n=1 Tax=Clostridium leptum CAG:27 RepID=R6MXB7_9CLOT
fes cluster assembly scaffold protein nifu
Tax=RIFOXYD2_FULL_Deltaproteobacteria_66_9_curated
BSR_Lac_LFCR_na_at_87737_17
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11793..12965)
DNA (1173bp) protein (391aa)
Cysteine desulfurase IscS {ECO:0000256|HAMAP-Rule:MF_00331, ECO:0000256|SAAS:SAAS00038344}; EC=2.8.1.7 {ECO:0000256|HAMAP-Rule:MF_00331, ECO:0000256|SAAS:SAAS00063383};; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaerobacter.;" source="Caloranaerobacter azorensis H53214.;"
cysteine desulfurase NifS (EC:2.8.1.7)
Cysteine desulfurase NifS n=1 Tax=Lachnospiraceae bacterium 2_1_46FAA RepID=F3B9J3_9FIRM
BSR_Lac_LFCR_na_at_87737_18
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12962..13384)
DNA (423bp) protein (141aa)
Transcriptional regulator, Rrf2 family n=2 Tax=Clostridiales RepID=B0AAN4_9FIRM
Transcriptional regulator, Rrf2 family {ECO:0000313|EMBL:EDQ96422.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
transcriptional regulator (HTH winged helix type)
BSR_Lac_LFCR_na_at_87737_19
Treponema maltophilum, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(13692..14807)
DNA (1116bp) protein (372aa)
Uncharacterized protein n=1 Tax=Treponema maltophilum ATCC 51939 RepID=S3K1N9_TREMA
Uncharacterized protein {ECO:0000313|EMBL:EPF31435.1}; TaxID=1125699 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema maltophilum ATCC 51939.;"
Malate/L-lactate dehydrogenase
BSR_Lac_LFCR_na_at_87737_20
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14974..15375
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CYK3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOD01659.1}; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacter kiritimatiensis.;"
hypothetical protein
BSR_Lac_LFCR_na_at_87737_21
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15520..16980
DNA (1461bp) protein (487aa)
murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (EC:6.3.2.13)
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase {ECO:0000256|HAMAP-Rule:MF_00208}; EC=6.3.2.13 {ECO:0000256|HAMAP-Rule:MF_00208};; Meso-A2pm-adding enzyme {ECO:0000256|HAMAP-Rule:MF_00208}; Meso-diaminopimelate-adding enzyme {ECO:0000256|HAMAP-Rule:MF_00208}; UDP-MurNAc-L-Ala-D-Glu:meso-diaminopimelate ligase {ECO:0000256|HAMAP-Rule:MF_00208}; UDP-MurNAc-tripeptide synthetase {ECO:0000256|HAMAP-Rule:MF_00208}; UDP-N-acetylmuramyl-tripeptide synthetase {ECO:0000256|HAMAP-Rule:MF_00208}; TaxID=441772 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Langeland / NCTC 10281 / Type F).;"
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase n=2 Tax=Clostridium botulinum F RepID=A7GDE5_CLOBL
BSR_Lac_LFCR_na_at_87737_22
Clostridium carboxidivorans, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17032..18393)
DNA (1362bp) protein (454aa)
UPF0210 protein CcarbDRAFT_0924/CLCAR_0614 n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PQ64_9CLOT
UPF0210 protein CcarbDRAFT_0924 {ECO:0000256|HAMAP-Rule:MF_01221}; TaxID=536227 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium carboxidivorans P7.;"
hypothetical protein
BSR_Lac_LFCR_na_at_87737_23
Eubacterium limosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18403..18672)
DNA (270bp) protein (90aa)
UPF0237 protein ELI_2535 n=1 Tax=Eubacterium limosum (strain KIST612) RepID=E3GE22_EUBLK
hypothetical protein
UPF0237 protein ELI_2535 {ECO:0000256|HAMAP-Rule:MF_01054}; TaxID=903814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium limosum (strain KIST612).;"
BSR_Lac_LFCR_na_at_87737_24
Clostridium sp. CAG:433, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18669..19436)
DNA (768bp) protein (256aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:433 RepID=R6ZDH4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD28557.1}; TaxID=1262806 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:433.;"
hypothetical protein
BSR_Lac_LFCR_na_at_87737_25
Anaerofustis stercorihominis, Anaerofustis, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19429..20802)
DNA (1374bp) protein (458aa)
Mur ligase middle domain protein n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1CB04_9FIRM
Mur ligase middle domain protein {ECO:0000313|EMBL:EDS71451.1}; TaxID=445971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Anaerofustis.;" source="Anaerofustis stercorihominis DSM 17244.;"
hypothetical protein
Displaying 25 items

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