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BSR_Lac_LFCR_na_at_120551

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BSR_Lac_LFCR_na_at_120551_1
GWA2_Planctomycetes_40_7_curated, Planctomycetes, Bacteria

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56..775
DNA (720bp) protein (240aa)
Pyruvate:ferredoxin and related 2-oxoacid:ferredoxin oxidoreductases beta subunit id=1764210 bin=GWA2_Planctomycetia_40_7 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Planctomycetia_40_7 organism_group=Planctomycetes
MFS transporter
Tax=GWA2_Planctomycetes_40_7_curated
BSR_Lac_LFCR_na_at_120551_2
Clostridium sp. CAG:230, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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790..1185
DNA (396bp) protein (132aa)
cytidine deaminase (EC:3.5.4.5)
Cytidine deaminase n=1 Tax=Lachnospiraceae bacterium A4 RepID=R9JMZ3_9FIRM
Cytidine deaminase {ECO:0000313|EMBL:CDA88072.1}; TaxID=1262782 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:230.;"
BSR_Lac_LFCR_na_at_120551_3
unknown

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comp(1228..1455)
DNA (228bp) protein (76aa)

This feature has no annotations

BSR_Lac_LFCR_na_at_120551_4
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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1552..2190
DNA (639bp) protein (213aa)
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435};; DNA-(apurinic or apyrimidinic site) lyase {ECO:0000256|HAMAP-Rule:MF_00942}; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacter kiritimatiensis.;"
Endonuclease III n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CC74_9CLOT
endonuclease III
BSR_Lac_LFCR_na_at_120551_5
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2193..2513
DNA (321bp) protein (107aa)
UPF0145 protein CLOSTASPAR_03720 n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D379_9CLOT
hypothetical protein
UPF0145 protein CLOSTASPAR_03720 {ECO:0000256|HAMAP-Rule:MF_00338}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
BSR_Lac_LFCR_na_at_120551_6
unknown

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2601..2843
DNA (243bp) protein (81aa)
Putative uncharacterized protein id=4584954 bin=GWF2_Clostridiales_38_85 species=Eubacterium limosum genus=Eubacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
BSR_Lac_LFCR_na_at_120551_7
Eubacterium limosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2824..3135
DNA (312bp) protein (104aa)
UPF0145 protein ELI_0544 n=1 Tax=Eubacterium limosum (strain KIST612) RepID=E3GIS5_EUBLK
hypothetical protein
UPF0145 protein ELI_0544 {ECO:0000256|HAMAP-Rule:MF_00338}; TaxID=903814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium limosum (strain KIST612).;"
BSR_Lac_LFCR_na_at_120551_8
Eubacterium limosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3440..4366
DNA (927bp) protein (309aa)
Periplasmic binding protein n=1 Tax=Eubacterium limosum (strain KIST612) RepID=E3GJD1_EUBLK
periplasmic binding protein
Periplasmic binding protein {ECO:0000313|EMBL:ADO35766.1}; TaxID=903814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium limosum (strain KIST612).;"
BSR_Lac_LFCR_na_at_120551_9
Acetobacterium woodii, Acetobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4384..5394
DNA (1011bp) protein (337aa)
Putative metal ABC transport system permease protein n=1 Tax=Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC 1655) RepID=H6LI82_ACEWD
putative metal ABC transport system permease protein
Putative metal ABC transport system permease protein {ECO:0000313|EMBL:AFA49782.1}; TaxID=931626 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Acetobacterium.;" source="Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC; 1655).;"
BSR_Lac_LFCR_na_at_120551_10
Methanococcoides methylutens, Methanococcoides, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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5395..6171
DNA (777bp) protein (259aa)
Iron complex/Vitamin B12 ABC transporter ATPase subunit n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12VS5_METBU
Vitamin B12 ABC transporter, ATPase component BtuD {ECO:0000313|EMBL:AKB85875.1}; TaxID=1434104 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanococcoides.;" source="Methanococcoides methylutens MM1.;"
ABC transporter, ATPase subunit
BSR_Lac_LFCR_na_at_120551_11
Anaerofustis stercorihominis, Anaerofustis, Clostridiales, Clostridia, Firmicutes, Bacteria

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6429..6896
DNA (468bp) protein (156aa)
Putative tRNA (cytidine(34)-2'-O)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01885}; EC=2.1.1.207 {ECO:0000256|HAMAP-Rule:MF_01885};; tRNA (cytidine/uridine-2'-O-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01885}; TaxID=445971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Anaerofustis.;" source="Anaerofustis stercorihominis DSM 17244.;"
spoU; RNA methyltransferase SpoU (EC:2.1.1.-)
Putative tRNA (cytidine(34)-2'-O)-methyltransferase n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1C7R4_9FIRM
BSR_Lac_LFCR_na_at_120551_12
Anaerofustis stercorihominis, Anaerofustis, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6939..7877
DNA (939bp) protein (313aa)
Thioredoxin reductase {ECO:0000256|RuleBase:RU003881}; EC=1.8.1.9 {ECO:0000256|RuleBase:RU003881};; TaxID=445971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Anaerofustis.;" source="Anaerofustis stercorihominis DSM 17244.;"
Thioredoxin reductase n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1C7R6_9FIRM
thioredoxin reductase
BSR_Lac_LFCR_na_at_120551_13
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

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comp(7937..8332)
DNA (396bp) protein (132aa)
Putative uncharacterized protein id=4182913 bin=GWF2_Clostridiales_38_85 species=Ethanoligenens harbinense genus=Ethanoligenens taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
hypothetical protein
Tax=GWF2_Clostridiales_38_85_curated
BSR_Lac_LFCR_na_at_120551_14
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8471..9526)
DNA (1056bp) protein (352aa)
Twitching motility protein n=1 Tax=Thermoanaerobacter wiegelii Rt8.B1 RepID=G2MV79_9THEO
pili biogenesis protein PilT-like ATPase
Twitching motility protein PilT {ECO:0000313|EMBL:ERM91665.1}; TaxID=1388761 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Caldanaerobacter subterraneus subsp. yonseiensis KB-1.;"
BSR_Lac_LFCR_na_at_120551_15
Ethanoligenens harbinense, Ethanoligenens, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9535..11223)
DNA (1689bp) protein (563aa)
Type II secretion system protein E n=1 Tax=Ethanoligenens harbinense (strain DSM 18485 / JCM 12961 / CGMCC 1.5033 / YUAN-3) RepID=E6U2Z3_ETHHY
type II secretion system protein E
Type II secretion system protein E {ECO:0000313|EMBL:ADU26360.1}; TaxID=663278 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ethanoligenens.;" source="Ethanoligenens harbinense (strain DSM 18485 / JCM 12961 / CGMCC 1.5033; / YUAN-3).;"
BSR_Lac_LFCR_na_at_120551_16
Ethanoligenens harbinense, Ethanoligenens, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11322..12086
DNA (765bp) protein (255aa)
prepilin peptidase (EC:3.4.23.43)
Type 4 prepilin-like proteins leader peptide-processing enzyme {ECO:0000256|RuleBase:RU003794}; EC=2.1.1.- {ECO:0000256|RuleBase:RU003794};; EC=3.4.23.43 {ECO:0000256|RuleBase:RU003794};; TaxID=663278 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ethanoligenens.;" source="Ethanoligenens harbinense (strain DSM 18485 / JCM 12961 / CGMCC 1.5033; / YUAN-3).;"
Type 4 prepilin-like proteins leader peptide-processing enzyme n=1 Tax=Ethanoligenens harbinense (strain DSM 18485 / JCM 12961 / CGMCC 1.5033 / YUAN-3) RepID=E6U2Z2_ETHHY
BSR_Lac_LFCR_na_at_120551_17
unknown

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comp(12102..12635)
DNA (534bp) protein (178aa)
BSR_Lac_LFCR_na_at_120551_18
unknown

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comp(12625..12984)
DNA (360bp) protein (120aa)
BSR_Lac_LFCR_na_at_120551_19

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comp(12996..15359)
DNA (2364bp) protein (788aa)
Putative uncharacterized protein n=1 Tax=Ostreococcus lucimarinus virus OlV4 RepID=G9E542_9VIRU
Putative uncharacterized protein {ECO:0000313|EMBL:AET84566.1}; TaxID=754063 species="Viruses; dsDNA viruses, no RNA stage; unclassified dsDNA viruses.;" source="Ostreococcus lucimarinus virus OlV4.;"
hypothetical protein
BSR_Lac_LFCR_na_at_120551_20
Ethanoligenens harbinense, Ethanoligenens, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15404..16084)
DNA (681bp) protein (227aa)
Putative uncharacterized protein n=1 Tax=Ethanoligenens harbinense (strain DSM 18485 / JCM 12961 / CGMCC 1.5033 / YUAN-3) RepID=E6U301_ETHHY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADU26368.1}; TaxID=663278 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ethanoligenens.;" source="Ethanoligenens harbinense (strain DSM 18485 / JCM 12961 / CGMCC 1.5033; / YUAN-3).;"
BSR_Lac_LFCR_na_at_120551_21
unknown

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comp(16086..16652)
DNA (567bp) protein (189aa)

This feature has no annotations

BSR_Lac_LFCR_na_at_120551_22
unknown

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comp(16665..16772)
DNA (108bp) protein (36aa)

This feature has no annotations

Displaying 22 items

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