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BSR_Lac_LFCR_na_at_5274

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BSR_Lac_LFCR_na_at_5274_1
unknown

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comp(1..186)
DNA (186bp) protein (62aa)

This feature has no annotations

BSR_Lac_LFCR_na_at_5274_2
[Clostridium] clariflavum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(325..981)
DNA (657bp) protein (219aa)
V-type ATP synthase subunit D n=1 Tax=Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45) RepID=G8LZJ6_CLOCD
H(+)-transporting ATP synthase, vacuolar type, subunit D
V-type ATP synthase subunit D {ECO:0000256|HAMAP-Rule:MF_00271}; V-ATPase subunit D {ECO:0000256|HAMAP-Rule:MF_00271}; Flags: Precursor;; TaxID=720554 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45).;"
BSR_Lac_LFCR_na_at_5274_3
Ruminiclostridium thermocellum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(997..2370)
DNA (1374bp) protein (458aa)
V-type ATP synthase beta chain n=7 Tax=Clostridium thermocellum RepID=VATB_CLOTH
H+transporting two-sector ATPase subunit alpha/beta
V-type ATP synthase beta chain {ECO:0000255|HAMAP-Rule:MF_00310}; V-ATPase subunit B {ECO:0000255|HAMAP-Rule:MF_00310}; TaxID=203119 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium thermocellum (strain ATCC 27405 / DSM 1237 / NBRC 103400 /; NCIMB 10682 / NRRL B-4536 / VPI 7372) (Ruminiclostridium; thermocellum).;"
BSR_Lac_LFCR_na_at_5274_4
Oscillibacter valericigenes, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2370..4139)
DNA (1770bp) protein (590aa)
ntpA; V-type Na(+)-transporting ATPase A subunit (EC:3.6.3.15)
V-type ATP synthase alpha chain {ECO:0000256|HAMAP-Rule:MF_00309}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_00309};; V-ATPase subunit A {ECO:0000256|HAMAP-Rule:MF_00309}; TaxID=693746 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 /; Sjm18-20).;"
V-type ATP synthase alpha chain n=1 Tax=Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 / Sjm18-20) RepID=G4KPG4_OSCVS
BSR_Lac_LFCR_na_at_5274_5
Firmicutes bacterium ASF500, Firmicutes, Bacteria

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comp(4165..4479)
DNA (315bp) protein (105aa)
Archaeal/vacuolar-type H+-ATPase subunit F (EC:3.6.3.14)
V-type ATP synthase subunit F n=1 Tax=Firmicutes bacterium ASF500 RepID=V2YHU4_9FIRM
V-type ATP synthase subunit F {ECO:0000256|HAMAP-Rule:MF_00312}; V-ATPase subunit F {ECO:0000256|HAMAP-Rule:MF_00312}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
BSR_Lac_LFCR_na_at_5274_6
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4472..5473)
DNA (1002bp) protein (334aa)
ntpC; V-type Na(+)-transporting ATPase C subunit (EC:3.6.3.15)
Putative ATP synthase, subunit C n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NQZ1_9FIRM
Putative ATP synthase, subunit C {ECO:0000313|EMBL:EDN01487.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
BSR_Lac_LFCR_na_at_5274_7
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5571..6170)
DNA (600bp) protein (200aa)
V-type ATP synthase subunit E (V-type ATPase subunit E) n=1 Tax=Clostridiales bacterium NK3B98 RepID=UPI0003B4F41C
V-type proton ATPase subunit E {ECO:0000256|HAMAP-Rule:MF_00311}; V-ATPase subunit E {ECO:0000256|HAMAP-Rule:MF_00311}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
atpE; V-type proton ATPase subunit E
BSR_Lac_LFCR_na_at_5274_8
Eubacterium sp. CAG:156, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6182..6673)
DNA (492bp) protein (164aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:156 RepID=R5Z4B3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA28901.1}; TaxID=1262880 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:156.;"
ATP synthase subunit C
BSR_Lac_LFCR_na_at_5274_9
Clostridiales bacterium S5-A14a, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6675..8627)
DNA (1953bp) protein (651aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:102 RepID=R5AC11_9FIRM
V-type ATP synthase subunit I {ECO:0000256|RuleBase:RU361189}; TaxID=1230734 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XIII. Incertae Sedis.;" source="Clostridiales bacterium S5-A14a.;"
archaeal/vacuolar-type H+-ATPase subunit I
BSR_Lac_LFCR_na_at_5274_10
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

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comp(8618..8935)
DNA (318bp) protein (106aa)
A1A0 archaeal ATP synthase subunit H AhaH n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5ATX7_9FIRM
A1A0 archaeal ATP synthase subunit H AhaH {ECO:0000313|EMBL:CCX46423.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
hypothetical protein
BSR_Lac_LFCR_na_at_5274_11
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9097..9570)
DNA (474bp) protein (158aa)
dCMP deaminase / Late competence protein ComEB {ECO:0000313|EMBL:EOD01758.1}; EC=3.5.4.12 {ECO:0000313|EMBL:EOD01758.1};; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacter kiritimatiensis.;"
dCMP deaminase / Late competence protein ComEB n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1AX23_9CLOT
zinc-binding CMP/dCMP deaminase protein
BSR_Lac_LFCR_na_at_5274_12
Acholeplasma brassicae, Acholeplasma, Acholeplasmatales, Mollicutes, Tenericutes, Bacteria

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comp(9585..10034)
DNA (450bp) protein (150aa)
rpiB; Ribose 5-phosphate isomerase (EC:5.3.1.26)
Ribose 5-phosphate isomerase {ECO:0000313|EMBL:CCV65349.1}; EC=5.3.1.26 {ECO:0000313|EMBL:CCV65349.1};; TaxID=61635 species="Bacteria; Tenericutes; Mollicutes; Acholeplasmatales; Acholeplasmataceae; Acholeplasma.;" source="Acholeplasma brassicae.;"
Ribose 5-phosphate isomerase n=1 Tax=Acholeplasma brassicae RepID=U4KSQ5_9MOLU
BSR_Lac_LFCR_na_at_5274_13
GWE2_Clostridiales_32_10_curated, Clostridiales, Bacteria

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comp(10039..10494)
DNA (456bp) protein (152aa)
Protein tyrosine phosphatase id=1875539 bin=GWE2_Clostridiales_32_10 species=[Clostridium] stercorarium genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_Clostridiales_32_10 organism_group=Clostridiales
RpiB; ribose 5-phosphate isomerase RpiB
Tax=GWE2_Clostridiales_32_10_curated
BSR_Lac_LFCR_na_at_5274_14
Thermoanaerobacter ethanolicus, Thermoanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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comp(10506..11516)
DNA (1011bp) protein (337aa)
Threonylcarbamoyl-AMP synthase {ECO:0000256|PIRNR:PIRNR004930}; Short=TC-AMP synthase {ECO:0000256|PIRNR:PIRNR004930};; EC=2.7.7.87 {ECO:0000256|PIRNR:PIRNR004930};; L-threonylcarbamoyladenylate synthase {ECO:0000256|PIRNR:PIRNR004930}; TaxID=589861 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Thermoanaerobacter.;" source="Thermoanaerobacter ethanolicus CCSD1.;"
Sua5/YciO/YrdC/YwlC family protein n=1 Tax=Thermoanaerobacter ethanolicus CCSD1 RepID=C7IR61_THEET
Sua5/YciO/YrdC/YwlC family protein
BSR_Lac_LFCR_na_at_5274_15
Caloramator australicus, Caloramator, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11520..12593)
DNA (1074bp) protein (358aa)
Peptide chain release factor 1 n=1 Tax=Caloramator australicus RC3 RepID=G0V4G5_9CLOT
Peptide chain release factor 1 {ECO:0000256|HAMAP-Rule:MF_00093}; Short=RF-1 {ECO:0000256|HAMAP-Rule:MF_00093};; TaxID=857293 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloramator.;" source="Caloramator australicus RC3.;"
peptide chain release factor 1
BSR_Lac_LFCR_na_at_5274_16
Clostridium sp. CAG:122, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12674..13546)
DNA (873bp) protein (291aa)
33 kDa chaperonin n=2 Tax=Eubacterium RepID=C0EV16_9FIRM
33 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00117, ECO:0000256|SAAS:SAAS00038673}; Heat shock protein 33 homolog {ECO:0000256|HAMAP-Rule:MF_00117}; TaxID=1262773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:122.;"
Disulfide bond chaperones of the HSP33 family
BSR_Lac_LFCR_na_at_5274_17
R_OD1_Falkowbacteria_45_15, Falkowbacteria, Parcubacteria, Bacteria

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comp(13548..13853)
DNA (306bp) protein (102aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA036-E14 RepID=UPI000382A1E1
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_OD1_Falkowbacteria_45_15_curated
BSR_Lac_LFCR_na_at_5274_18
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13946..14806
DNA (861bp) protein (287aa)
DegV family protein n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CD45_9CLOT
DegV family protein {ECO:0000313|EMBL:EOD00220.1}; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacter kiritimatiensis.;"
degV family protein
BSR_Lac_LFCR_na_at_5274_19
Paenibacillus sp. HGF5, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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14955..15800
DNA (846bp) protein (282aa)
Conserved domain protein n=1 Tax=Paenibacillus sp. HGF5 RepID=F3MJG1_9BACL
Conserved domain protein {ECO:0000313|EMBL:EGG31335.1}; TaxID=908341 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. HGF5.;"
hypothetical protein
BSR_Lac_LFCR_na_at_5274_20
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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15945..17045
DNA (1101bp) protein (367aa)
Trypsin n=1 Tax=Clostridium sp. MSTE9 RepID=J0N443_9CLOT
Trypsin {ECO:0000313|EMBL:EJF41589.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
peptidase S1 and S6 chymotrypsin/Hap
BSR_Lac_LFCR_na_at_5274_21
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

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comp(17052..17864)
DNA (813bp) protein (271aa)
Cof-like hydrolase (EC:3.1.3.18)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6F0N2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB02954.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
BSR_Lac_LFCR_na_at_5274_22
unknown

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comp(17883..18503)
DNA (621bp) protein (207aa)

This feature has no annotations

BSR_Lac_LFCR_na_at_5274_23
Coprococcus catus, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(18620..18892)
DNA (273bp) protein (91aa)
Bacterial nucleoid DNA-binding protein n=1 Tax=Coprococcus catus GD/7 RepID=D4J6D1_9FIRM
Bacterial nucleoid DNA-binding protein
Bacterial nucleoid DNA-binding protein {ECO:0000313|EMBL:CBK79902.1}; TaxID=717962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus catus GD/7.;"
BSR_Lac_LFCR_na_at_5274_24
Anaerotruncus sp. CAG:528, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(18879..19067)
DNA (189bp) protein (63aa)
MazG family protein n=1 Tax=Anaerotruncus sp. CAG:528 RepID=R5Y6P8_9FIRM
MazG family protein {ECO:0000313|EMBL:CDA12327.1}; TaxID=1262700 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus; environmental samples.;" source="Anaerotruncus sp. CAG:528.;"
Displaying 24 items

View Taxonomy