ggKbase home page

BSR_Lac_LFCR_na_at_95733

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BSR_Lac_LFCR_na_at_95733_1
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(84..881)
DNA (798bp) protein (266aa)
Ferredoxin n=2 Tax=Clostridium botulinum RepID=C5VQ84_CLOBO
Ferredoxin {ECO:0000313|EMBL:KGM98540.1}; TaxID=1443128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum C/D str. DC5.;"
polyferredoxin
BSR_Lac_LFCR_na_at_95733_2
Eubacterium limosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(897..1469)
DNA (573bp) protein (191aa)
RnfA n=1 Tax=Eubacterium limosum (strain KIST612) RepID=E3GP16_EUBLK
protein RnfA
Electron transport complex subunit A {ECO:0000256|HAMAP-Rule:MF_00459}; TaxID=903814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium limosum (strain KIST612).;"
BSR_Lac_LFCR_na_at_95733_3
Eubacterium limosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1472..2089)
DNA (618bp) protein (206aa)
RnfE n=1 Tax=Eubacterium limosum (strain KIST612) RepID=E3GP17_EUBLK
protein RnfE
Electron transport complex subunit E {ECO:0000256|HAMAP-Rule:MF_00478}; TaxID=903814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium limosum (strain KIST612).;"
BSR_Lac_LFCR_na_at_95733_4
Clostridium sp. NCR, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2089..2694)
DNA (606bp) protein (202aa)
Electron transport complex, RnfABCDGE type, G subunit n=1 Tax=Clostridium bifermentans ATCC 638 RepID=T4VL27_CLOBI
Electron transport complex subunit G {ECO:0000256|HAMAP-Rule:MF_00479}; TaxID=1538552 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. NCR.;"
rnfG; electron transport complex protein, subunit G
BSR_Lac_LFCR_na_at_95733_5
Eubacterium limosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2702..3655)
DNA (954bp) protein (318aa)
RnfD n=1 Tax=Eubacterium limosum (strain KIST612) RepID=E3GP19_EUBLK
RnfD protein
Electron transport complex subunit D {ECO:0000256|HAMAP-Rule:MF_00462}; TaxID=903814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium limosum (strain KIST612).;"
BSR_Lac_LFCR_na_at_95733_6
Mahella australiensis, Mahella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3655..5016)
DNA (1362bp) protein (454aa)
Electron transport complex protein RnfC n=1 Tax=Mahella australiensis (strain DSM 15567 / CIP 107919 / 50-1 BON) RepID=F3ZVI8_MAHA5
RnfABCDGE type electron transport complex subunit C
Electron transport complex subunit C {ECO:0000256|HAMAP-Rule:MF_00461}; TaxID=697281 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family IV. Incertae Sedis; Mahella.;" source="Mahella australiensis (strain DSM 15567 / CIP 107919 / 50-1 BON).;"
BSR_Lac_LFCR_na_at_95733_7
Acetobacterium woodii, Acetobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5267..7021)
DNA (1755bp) protein (585aa)
hydA1; iron hydrogenase HydA1 (EC:1.12.7.2)
Iron hydrogenase HydA1 {ECO:0000313|EMBL:AFA49450.1}; EC=1.12.7.2 {ECO:0000313|EMBL:AFA49450.1};; TaxID=931626 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Acetobacterium.;" source="Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC; 1655).;"
Iron hydrogenase HydA1 n=1 Tax=Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC 1655) RepID=H6LFG3_ACEWD
BSR_Lac_LFCR_na_at_95733_8
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7048..8919)
DNA (1872bp) protein (624aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5B7F0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX51228.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
NADH dehydrogenase (quinone)
BSR_Lac_LFCR_na_at_95733_9
Eubacterium limosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8937..9407)
DNA (471bp) protein (157aa)
HydC n=1 Tax=Eubacterium limosum (strain KIST612) RepID=E3GKB0_EUBLK
HydC
HydC {ECO:0000313|EMBL:ADO35857.1}; TaxID=903814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium limosum (strain KIST612).;"
BSR_Lac_LFCR_na_at_95733_10
Anaerofustis stercorihominis, Anaerofustis, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(9806..11461)
DNA (1656bp) protein (552aa)
Arginine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00123}; EC=6.1.1.19 {ECO:0000256|HAMAP-Rule:MF_00123};; Arginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00123}; TaxID=445971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Anaerofustis.;" source="Anaerofustis stercorihominis DSM 17244.;"
arginyl-tRNA synthetase (EC:6.1.1.19)
Arginine--tRNA ligase n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1CAT4_9FIRM
BSR_Lac_LFCR_na_at_95733_11
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11479..11925)
DNA (447bp) protein (149aa)
hypothetical protein n=1 Tax=Acetivibrio cellulolyticus RepID=UPI0001E2E6A9
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ERI79854.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
BSR_Lac_LFCR_na_at_95733_12
Pseudoramibacter alactolyticus, Pseudoramibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11891..12955)
DNA (1065bp) protein (355aa)
D-alanine--D-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732}; EC=6.3.2.4 {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732};; D-Ala-D-Ala ligase {ECO:0000256|HAMAP-Rule:MF_00047}; D-alanylalanine synthetase {ECO:0000256|HAMAP-Rule:MF_00047}; TaxID=887929 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Pseudoramibacter.;" source="Pseudoramibacter alactolyticus ATCC 23263.;"
ddlA; D-alanine--D-alanine ligase (EC:6.3.2.4)
D-alanine--D-alanine ligase n=1 Tax=Pseudoramibacter alactolyticus ATCC 23263 RepID=E6MIC9_9FIRM
BSR_Lac_LFCR_na_at_95733_13
Pseudoramibacter alactolyticus, Pseudoramibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12975..14420)
DNA (1446bp) protein (482aa)
Nicotinate phosphoribosyltransferase {ECO:0000256|RuleBase:RU003838, ECO:0000256|SAAS:SAAS00075163}; EC=6.3.4.21 {ECO:0000256|RuleBase:RU003838, ECO:0000256|SAAS:SAAS00075163};; TaxID=887929 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Pseudoramibacter.;" source="Pseudoramibacter alactolyticus ATCC 23263.;"
Nicotinate phosphoribosyltransferase n=1 Tax=Pseudoramibacter alactolyticus ATCC 23263 RepID=E6MHQ2_9FIRM
hypothetical protein
BSR_Lac_LFCR_na_at_95733_trna_1
unknown

Not on your lists

comp(14466..14538)
DNA (73bp)
transferRNA Val
BSR_Lac_LFCR_na_at_95733_14
unknown

Not on your lists

comp(14676..15176)
DNA (501bp) protein (167aa)

This feature has no annotations

BSR_Lac_LFCR_na_at_95733_15
Anaerofustis stercorihominis, Anaerofustis, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15404..16597)
DNA (1194bp) protein (398aa)
tuf; elongation factor Tu 1 (EC:3.6.5.3)
Elongation factor Tu n=2 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1CAF4_9FIRM
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=445971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Anaerofustis.;" source="Anaerofustis stercorihominis DSM 17244.;"
BSR_Lac_LFCR_na_at_95733_16
Acetobacterium woodii, Acetobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16611..18677)
DNA (2067bp) protein (689aa)
Elongation factor G n=1 Tax=Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC 1655) RepID=H6LBW3_ACEWD
fusA1; translation elongation factor G
Elongation factor G {ECO:0000256|HAMAP-Rule:MF_00054}; Short=EF-G {ECO:0000256|HAMAP-Rule:MF_00054};; TaxID=931626 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Acetobacterium.;" source="Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC; 1655).;"
BSR_Lac_LFCR_na_at_95733_17
Anaerofustis stercorihominis, Anaerofustis, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(18717..19187)
DNA (471bp) protein (157aa)
30S ribosomal protein S7 n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1C5N3_9FIRM
30S ribosomal protein S7 {ECO:0000256|HAMAP-Rule:MF_00480}; TaxID=445971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Anaerofustis.;" source="Anaerofustis stercorihominis DSM 17244.;"
30S ribosomal protein S7
BSR_Lac_LFCR_na_at_95733_18
Anaerofustis stercorihominis, Anaerofustis, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(19323..19694)
DNA (372bp) protein (124aa)
30S ribosomal protein S12 n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1C5N2_9FIRM
30S ribosomal protein S12 {ECO:0000256|HAMAP-Rule:MF_00403, ECO:0000256|RuleBase:RU003623}; TaxID=445971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Anaerofustis.;" source="Anaerofustis stercorihominis DSM 17244.;"
rpsL; 30S ribosomal protein S12
BSR_Lac_LFCR_na_at_95733_19
Mahella australiensis, Mahella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19681..19962)
DNA (282bp) protein (94aa)
LSU ribosomal protein L7AE n=1 Tax=Mahella australiensis (strain DSM 15567 / CIP 107919 / 50-1 BON) RepID=F4A2Z1_MAHA5
50S ribosomal protein L7
LSU ribosomal protein L7AE {ECO:0000313|EMBL:AEE97334.1}; TaxID=697281 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family IV. Incertae Sedis; Mahella.;" source="Mahella australiensis (strain DSM 15567 / CIP 107919 / 50-1 BON).;"
BSR_Lac_LFCR_na_at_95733_20
Eubacterium limosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20013..23642)
DNA (3630bp) protein (1210aa)
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=903814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium limosum (strain KIST612).;"
DNA-directed RNA polymerase subunit beta' n=1 Tax=Eubacterium limosum (strain KIST612) RepID=E3GQ71_EUBLK
DNA-directed RNA polymerase
BSR_Lac_LFCR_na_at_95733_21
Anaerofustis stercorihominis, Anaerofustis, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23665..27249)
DNA (3585bp) protein (1195aa)
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=445971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Anaerofustis.;" source="Anaerofustis stercorihominis DSM 17244.;"
DNA-directed RNA polymerase subunit beta n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1C8K2_9FIRM
rpoB; DNA-directed RNA polymerase beta subunit RpoB
BSR_Lac_LFCR_na_at_95733_22
Clostridium carboxidivorans, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27553..29163)
DNA (1611bp) protein (537aa)
CTP synthase {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037303}; EC=6.3.4.2 {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037401};; CTP synthetase {ECO:0000256|HAMAP-Rule:MF_01227}; UTP--ammonia ligase {ECO:0000256|HAMAP-Rule:MF_01227}; TaxID=536227 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium carboxidivorans P7.;"
CTP synthase n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PVF3_9CLOT
CTP synthase
BSR_Lac_LFCR_na_at_95733_23
Dialister sp. CAG:486, Dialister, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(29333..30262)
DNA (930bp) protein (310aa)
1-deoxy-D-xylulose-5-phosphate synthase (EC:2.2.1.7)
Uncharacterized protein n=1 Tax=Dialister sp. CAG:486 RepID=R6B996_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA49922.1}; TaxID=1262870 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Dialister; environmental samples.;" source="Dialister sp. CAG:486.;"
BSR_Lac_LFCR_na_at_95733_24
Acetobacterium woodii, Acetobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30267..31076)
DNA (810bp) protein (270aa)
tktA1; transketolase (EC:2.2.1.1)
Transketolase subunit A {ECO:0000313|EMBL:AFA47172.1}; EC=2.2.1.1 {ECO:0000313|EMBL:AFA47172.1};; TaxID=931626 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Acetobacterium.;" source="Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC; 1655).;"
Transketolase subunit A n=1 Tax=Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC 1655) RepID=H6LH34_ACEWD
BSR_Lac_LFCR_na_at_95733_25
Eubacterium limosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31104..31973)
DNA (870bp) protein (290aa)
Uncharacterized protein n=1 Tax=Eubacterium limosum (strain KIST612) RepID=E3GQ02_EUBLK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADO39051.1}; TaxID=903814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium limosum (strain KIST612).;"
Displaying 26 items

View Taxonomy