ggKbase home page

BSR_Lac_LFCR_na_at_112309

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BSR_Lac_LFCR_na_at_112309_trna_1
unknown

Not on your lists

60..133
DNA (74bp)
transferRNA Met
BSR_Lac_LFCR_na_at_112309_1
Aminobacterium colombiense, Aminobacterium, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

214..1635
DNA (1422bp) protein (474aa)
tRNA(Ile)-lysidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; EC=6.3.4.19 {ECO:0000256|HAMAP-Rule:MF_01161};; tRNA(Ile)-2-lysyl-cytidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; tRNA(Ile)-lysidine synthetase {ECO:0000256|HAMAP-Rule:MF_01161}; TaxID=572547 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Aminobacterium.;" source="Aminobacterium colombiense (strain DSM 12261 / ALA-1).;"
tRNA(Ile)-lysidine synthase n=1 Tax=Aminobacterium colombiense (strain DSM 12261 / ALA-1) RepID=D5EEC8_AMICL
tRNA(Ile)-lysidine synthetase
BSR_Lac_LFCR_na_at_112309_2
Aminobacterium colombiense, Aminobacterium, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

1643..2221
DNA (579bp) protein (193aa)
hypoxanthine phosphoribosyltransferase (EC:2.4.2.8)
Hypoxanthine phosphoribosyltransferase {ECO:0000313|EMBL:ADE56911.1}; EC=2.4.2.8 {ECO:0000313|EMBL:ADE56911.1};; TaxID=572547 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Aminobacterium.;" source="Aminobacterium colombiense (strain DSM 12261 / ALA-1).;"
Hypoxanthine phosphoribosyltransferase n=1 Tax=Aminobacterium colombiense (strain DSM 12261 / ALA-1) RepID=D5EEC9_AMICL
BSR_Lac_LFCR_na_at_112309_3
Aminobacterium colombiense, Aminobacterium, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

2221..4140
DNA (1920bp) protein (640aa)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; TaxID=572547 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Aminobacterium.;" source="Aminobacterium colombiense (strain DSM 12261 / ALA-1).;"
ATP-dependent metalloprotease FtsH (EC:3.6.4.3)
ATP-dependent zinc metalloprotease FtsH n=1 Tax=Aminobacterium colombiense (strain DSM 12261 / ALA-1) RepID=D5EED0_AMICL
BSR_Lac_LFCR_na_at_112309_4
Aminobacterium colombiense, Aminobacterium, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

4241..6292
DNA (2052bp) protein (684aa)
UvrABC system protein B n=1 Tax=Aminobacterium colombiense (strain DSM 12261 / ALA-1) RepID=D5EED1_AMICL
UvrABC system protein B {ECO:0000256|HAMAP-Rule:MF_00204, ECO:0000256|RuleBase:RU003587}; Short=Protein UvrB {ECO:0000256|HAMAP-Rule:MF_00204};; Excinuclease ABC subunit B {ECO:0000256|HAMAP-Rule:MF_00204}; TaxID=572547 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Aminobacterium.;" source="Aminobacterium colombiense (strain DSM 12261 / ALA-1).;"
excinuclease ABC subunit B
BSR_Lac_LFCR_na_at_112309_5
Aminobacterium colombiense, Aminobacterium, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

6510..9059
DNA (2550bp) protein (850aa)
Excinuclease ABC, A subunit n=1 Tax=Aminobacterium colombiense (strain DSM 12261 / ALA-1) RepID=D5EED2_AMICL
UvrABC system protein A {ECO:0000256|SAAS:SAAS00088996}; TaxID=572547 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Aminobacterium.;" source="Aminobacterium colombiense (strain DSM 12261 / ALA-1).;"
excinuclease ABC subunit A
BSR_Lac_LFCR_na_at_112309_6
Aminobacterium colombiense, Aminobacterium, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

9037..9918
DNA (882bp) protein (294aa)
RNA methyltransferase, TrmH family, group 3 n=1 Tax=Aminobacterium colombiense (strain DSM 12261 / ALA-1) RepID=D5EED3_AMICL
TrmH family RNA methyltransferase
RNA methyltransferase, TrmH family, group 3 {ECO:0000313|EMBL:ADE56915.1}; TaxID=572547 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Aminobacterium.;" source="Aminobacterium colombiense (strain DSM 12261 / ALA-1).;"
BSR_Lac_LFCR_na_at_112309_7
Aminobacterium colombiense, Aminobacterium, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

9908..10720
DNA (813bp) protein (271aa)
pyrroline-5-carboxylate reductase (EC:1.5.1.2)
Pyrroline-5-carboxylate reductase {ECO:0000256|HAMAP-Rule:MF_01925}; Short=P5C reductase {ECO:0000256|HAMAP-Rule:MF_01925};; Short=P5CR {ECO:0000256|HAMAP-Rule:MF_01925};; EC=1.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01925};; PCA reductase {ECO:0000256|HAMAP-Rule:MF_01925}; TaxID=572547 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Aminobacterium.;" source="Aminobacterium colombiense (strain DSM 12261 / ALA-1).;"
Pyrroline-5-carboxylate reductase n=1 Tax=Aminobacterium colombiense (strain DSM 12261 / ALA-1) RepID=D5EED4_AMICL
BSR_Lac_LFCR_na_at_112309_trna_2
unknown

Not on your lists

10796..10867
DNA (72bp)
transferRNA Val
BSR_Lac_LFCR_na_at_112309_8
Aminobacterium colombiense, Aminobacterium, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

comp(10896..11951)
DNA (1056bp) protein (352aa)
Beta-lactamase n=1 Tax=Aminobacterium colombiense (strain DSM 12261 / ALA-1) RepID=D5EEE0_AMICL
beta-lactamase
Beta-lactamase {ECO:0000313|EMBL:ADE56922.1}; TaxID=572547 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Aminobacterium.;" source="Aminobacterium colombiense (strain DSM 12261 / ALA-1).;"
BSR_Lac_LFCR_na_at_112309_9
Aminobacterium colombiense, Aminobacterium, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

12088..12471
DNA (384bp) protein (128aa)
Holo-[acyl-carrier-protein] synthase {ECO:0000256|HAMAP-Rule:MF_00101, ECO:0000256|SAAS:SAAS00237208}; Short=Holo-ACP synthase {ECO:0000256|HAMAP-Rule:MF_00101};; EC=2.7.8.7 {ECO:0000256|HAMAP-Rule:MF_00101, ECO:0000256|SAAS:SAAS00237180};; 4'-phosphopantetheinyl transferase AcpS {ECO:0000256|HAMAP-Rule:MF_00101}; TaxID=572547 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Aminobacterium.;" source="Aminobacterium colombiense (strain DSM 12261 / ALA-1).;"
Holo-[acyl-carrier-protein] synthase n=1 Tax=Aminobacterium colombiense (strain DSM 12261 / ALA-1) RepID=D5EEE1_AMICL
4'-phosphopantetheinyl transferase
BSR_Lac_LFCR_na_at_112309_10
Aminobacterium colombiense, Aminobacterium, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

12455..13984
DNA (1530bp) protein (510aa)
Carbohydrate kinase, YjeF related protein n=1 Tax=Aminobacterium colombiense (strain DSM 12261 / ALA-1) RepID=D5EEE2_AMICL
carbohydrate kinase
Carbohydrate kinase, YjeF related protein {ECO:0000313|EMBL:ADE56924.1}; TaxID=572547 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Aminobacterium.;" source="Aminobacterium colombiense (strain DSM 12261 / ALA-1).;"
BSR_Lac_LFCR_na_at_112309_11
unknown

Not on your lists

13965..14192
DNA (228bp) protein (76aa)

This feature has no annotations

BSR_Lac_LFCR_na_at_112309_12
Aminobacterium colombiense, Aminobacterium, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

14212..14679
DNA (468bp) protein (156aa)
Putative uncharacterized protein n=1 Tax=Aminobacterium colombiense (strain DSM 12261 / ALA-1) RepID=D5EEE3_AMICL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADE56925.1}; TaxID=572547 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Aminobacterium.;" source="Aminobacterium colombiense (strain DSM 12261 / ALA-1).;"
BSR_Lac_LFCR_na_at_112309_13
Aminobacterium colombiense, Aminobacterium, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

14676..15380
DNA (705bp) protein (235aa)
Peptidase M22 glycoprotease n=1 Tax=Aminobacterium colombiense (strain DSM 12261 / ALA-1) RepID=D5EEE4_AMICL
peptidase M22 glycoprotease
Peptidase M22 glycoprotease {ECO:0000313|EMBL:ADE56926.1}; TaxID=572547 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Aminobacterium.;" source="Aminobacterium colombiense (strain DSM 12261 / ALA-1).;"
BSR_Lac_LFCR_na_at_112309_14
Aminobacterium colombiense, Aminobacterium, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

15510..15794
DNA (285bp) protein (95aa)
4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Aminobacterium colombiense (strain DSM 12261 / ALA-1) RepID=D5EEE5_AMICL
4Fe-4S ferredoxin
4Fe-4S ferredoxin iron-sulfur binding domain protein {ECO:0000313|EMBL:ADE56927.1}; TaxID=572547 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Aminobacterium.;" source="Aminobacterium colombiense (strain DSM 12261 / ALA-1).;"
BSR_Lac_LFCR_na_at_112309_15
Aminobacterium colombiense, Aminobacterium, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

15787..16920
DNA (1134bp) protein (378aa)
Pyruvate flavodoxin/ferredoxin oxidoreductase domain protein n=1 Tax=Aminobacterium colombiense (strain DSM 12261 / ALA-1) RepID=D5EEE6_AMICL
pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein
Pyruvate flavodoxin/ferredoxin oxidoreductase domain protein {ECO:0000313|EMBL:ADE56928.1}; TaxID=572547 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Aminobacterium.;" source="Aminobacterium colombiense (strain DSM 12261 / ALA-1).;"
BSR_Lac_LFCR_na_at_112309_16
Aminobacterium colombiense, Aminobacterium, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

16922..17749
DNA (828bp) protein (276aa)
Thiamine pyrophosphate protein domain protein TPP-binding protein n=1 Tax=Aminobacterium colombiense (strain DSM 12261 / ALA-1) RepID=D5EEE7_AMICL
thiamine pyrophosphate domain-containing TPP-binding protein
Thiamine pyrophosphate protein domain protein TPP-binding protein {ECO:0000313|EMBL:ADE56929.1}; TaxID=572547 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Aminobacterium.;" source="Aminobacterium colombiense (strain DSM 12261 / ALA-1).;"
BSR_Lac_LFCR_na_at_112309_17
Aminobacterium colombiense, Aminobacterium, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

17742..18302
DNA (561bp) protein (187aa)
Pyruvate/ketoisovalerate oxidoreductase n=1 Tax=Aminobacterium colombiense (strain DSM 12261 / ALA-1) RepID=D5EEE8_AMICL
pyruvate/ketoisovalerate oxidoreductase
Pyruvate/ketoisovalerate oxidoreductase {ECO:0000313|EMBL:ADE56930.1}; TaxID=572547 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Aminobacterium.;" source="Aminobacterium colombiense (strain DSM 12261 / ALA-1).;"
BSR_Lac_LFCR_na_at_112309_18
Aminobacterium colombiense, Aminobacterium, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

18439..18789
DNA (351bp) protein (117aa)
Putative uncharacterized protein n=1 Tax=Aminobacterium colombiense (strain DSM 12261 / ALA-1) RepID=D5EEE9_AMICL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADE56931.1}; TaxID=572547 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Aminobacterium.;" source="Aminobacterium colombiense (strain DSM 12261 / ALA-1).;"
BSR_Lac_LFCR_na_at_112309_19
Aminobacterium colombiense, Aminobacterium, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

18899..20026
DNA (1128bp) protein (376aa)
Sodium/hydrogen exchanger n=1 Tax=Aminobacterium colombiense (strain DSM 12261 / ALA-1) RepID=D5EEF0_AMICL
sodium/hydrogen exchanger
Sodium/hydrogen exchanger {ECO:0000313|EMBL:ADE56932.1}; TaxID=572547 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Aminobacterium.;" source="Aminobacterium colombiense (strain DSM 12261 / ALA-1).;"
BSR_Lac_LFCR_na_at_112309_20
Aminobacterium colombiense, Aminobacterium, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

20063..21481
DNA (1419bp) protein (473aa)
TrmA family RNA methyltransferase (EC:2.1.1.35)
RNA methyltransferase, TrmA family {ECO:0000313|EMBL:ADE56933.1}; EC=2.1.1.35 {ECO:0000313|EMBL:ADE56933.1};; TaxID=572547 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Aminobacterium.;" source="Aminobacterium colombiense (strain DSM 12261 / ALA-1).;"
RNA methyltransferase, TrmA family n=1 Tax=Aminobacterium colombiense (strain DSM 12261 / ALA-1) RepID=D5EEF1_AMICL
BSR_Lac_LFCR_na_at_112309_21
Clostridium sp. BL8, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21698..22315
DNA (618bp) protein (206aa)
hypothetical protein n=1 Tax=Clostridium tunisiense RepID=UPI00030B1828
Uncharacterized protein {ECO:0000313|EMBL:EQB87369.1}; TaxID=1354301 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. BL8.;"
GCN5-related N-acetyltransferase
BSR_Lac_LFCR_na_at_112309_22
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22278..22454
DNA (177bp) protein (59aa)
Predicted methylated DNA-protein cysteine methyltransferase n=3 Tax=root RepID=D4M1Y9_9FIRM
Predicted methylated DNA-protein cysteine methyltransferase
Predicted methylated DNA-protein cysteine methyltransferase {ECO:0000313|EMBL:CBL25251.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
BSR_Lac_LFCR_na_at_112309_23
Alkaliphilus oremlandii, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23029..23556
DNA (528bp) protein (176aa)
GCN5-related N-acetyltransferase n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MF18_ALKOO
N-acetyltransferase GCN5
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:ABW18687.1}; TaxID=350688 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus oremlandii (strain OhILAs) (Clostridium oremlandii; (strain OhILAs)).;"
Displaying 25 items

View Taxonomy