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BSR_Lac_LFCR_na_p_65545

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Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BSR_Lac_LFCR_na_p_65545_1
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1..234
DNA (234bp) protein (78aa)
LysR family transcriptional regulator n=1 Tax=Stenotrophomonas maltophilia MF89 RepID=T5K6E7_STEMA
DoxX family protein
DoxX family protein {ECO:0000313|EMBL:AEM49784.1}; TaxID=868597 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia JV3.;"
BSR_Lac_LFCR_na_p_65545_2
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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266..1054
DNA (789bp) protein (263aa)
4,5-dopa dioxygenase extradiol n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8L1B0_9GAMM
extradiol ring-cleavage dioxygenase class III protein subunit B
4,5-dopa dioxygenase extradiol {ECO:0000313|EMBL:EED37230.1}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;"
BSR_Lac_LFCR_na_p_65545_3
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1172..2821
DNA (1650bp) protein (550aa)
Sodium:proton antiporter n=1 Tax=Stenotrophomonas maltophilia MF89 RepID=T5KL59_STEMA
Sodium:proton antiporter {ECO:0000313|EMBL:EQM76154.1}; TaxID=1333853 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia MF89.;"
transmembrane Na+/H+ antiport transporter
BSR_Lac_LFCR_na_p_65545_4
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2903..3196)
DNA (294bp) protein (98aa)
Glutathione peroxidase n=1 Tax=Stenotrophomonas maltophilia MF89 RepID=T5KJ41_STEMA
Uncharacterized protein {ECO:0000313|EMBL:EJP78078.1}; TaxID=1183154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia Ab55555.;"
hypothetical protein
BSR_Lac_LFCR_na_p_65545_5
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3242..3784
DNA (543bp) protein (181aa)
Uncharacterized protein n=2 Tax=Stenotrophomonas maltophilia RepID=J7VIG9_STEMA
Uncharacterized protein {ECO:0000313|EMBL:EJP78079.1}; TaxID=1183154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia Ab55555.;"
hypothetical protein
BSR_Lac_LFCR_na_p_65545_6
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3932..4207)
DNA (276bp) protein (92aa)
Uncharacterized protein n=3 Tax=Stenotrophomonas RepID=I0KJ23_STEMA
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:EED40743.1}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;"
BSR_Lac_LFCR_na_p_65545_7
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4221..4709)
DNA (489bp) protein (163aa)
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia JV3 RepID=G0JW36_STEMA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEM49790.1}; TaxID=868597 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia JV3.;"
BSR_Lac_LFCR_na_p_65545_8
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4807..5745)
DNA (939bp) protein (313aa)
OmpA/MotB domain protein n=1 Tax=Stenotrophomonas maltophilia JV3 RepID=G0JW37_STEMA
OmpA/MotB domain-containing protein
OmpA/MotB domain protein {ECO:0000313|EMBL:AEM49791.1}; TaxID=868597 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia JV3.;"
BSR_Lac_LFCR_na_p_65545_9
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5749..6603)
DNA (855bp) protein (285aa)
Flagellar motor stator protein MotA n=1 Tax=Stenotrophomonas maltophilia JV3 RepID=G0JW38_STEMA
flagellar motor stator protein MotA
Flagellar motor stator protein MotA {ECO:0000313|EMBL:AEM49792.1}; TaxID=868597 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia JV3.;"
BSR_Lac_LFCR_na_p_65545_10
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6695..7162)
DNA (468bp) protein (156aa)
peptide methionine sulfoxide reductase msrB (EC:1.8.4.12)
Peptide methionine sulfoxide reductase MsrB {ECO:0000256|HAMAP-Rule:MF_01400}; EC=1.8.4.12 {ECO:0000256|HAMAP-Rule:MF_01400};; Peptide-methionine (R)-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01400}; TaxID=1451188 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia M30.;"
Peptide methionine sulfoxide reductase MsrB n=2 Tax=Stenotrophomonas maltophilia RepID=G0JW39_STEMA
BSR_Lac_LFCR_na_p_65545_11
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7303..7677
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia JV3 RepID=G0JW40_STEMA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEM49794.1}; Flags: Precursor;; TaxID=868597 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia JV3.;"
BSR_Lac_LFCR_na_p_65545_12
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7849..8004
DNA (156bp) protein (52aa)
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia JV3 RepID=G0JW41_STEMA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEM49795.1}; TaxID=868597 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia JV3.;"
BSR_Lac_LFCR_na_p_65545_13
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8116..8595)
DNA (480bp) protein (160aa)
Leucine-responsive regulatory protein, AsnC family n=5 Tax=Stenotrophomonas RepID=B8L1A0_9GAMM
lrp; leucine-responsive regulatory protein
Leucine-responsive regulatory protein, AsnC family {ECO:0000313|EMBL:EED37661.1}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;"
BSR_Lac_LFCR_na_p_65545_14
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8745..10049
DNA (1305bp) protein (435aa)
D-amino acid dehydrogenase small subunit (EC:1.4.99.1)
D-amino acid dehydrogenase {ECO:0000255|HAMAP-Rule:MF_01202}; EC=1.4.99.1 {ECO:0000255|HAMAP-Rule:MF_01202};; TaxID=522373 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (strain K279a).;"
D-amino acid dehydrogenase small subunit n=2 Tax=Stenotrophomonas maltophilia RepID=DADA_STRMK
BSR_Lac_LFCR_na_p_65545_15
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10028..11095
DNA (1068bp) protein (356aa)
alanine racemase (EC:5.1.1.1)
Alanine racemase {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|RuleBase:RU000608}; EC=5.1.1.1 {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|RuleBase:RU000608};; TaxID=1183154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia Ab55555.;"
Alanine racemase n=1 Tax=Stenotrophomonas maltophilia EPM1 RepID=M3GCV1_STEMA
BSR_Lac_LFCR_na_p_65545_16
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11198..11761)
DNA (564bp) protein (188aa)
membrane protein n=1 Tax=Xanthomonadaceae RepID=UPI00029A54E1
Uncharacterized protein {ECO:0000313|EMBL:EMI51560.1}; TaxID=1235458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia AU12-09.;"
hypothetical protein
BSR_Lac_LFCR_na_p_65545_17
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12005..13993
DNA (1989bp) protein (663aa)
PAS domain S-box protein n=2 Tax=Stenotrophomonas maltophilia RepID=J7V6A7_STEMA
PAS domain S-box protein {ECO:0000313|EMBL:EJP78091.1}; TaxID=1183154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia Ab55555.;"
PAS/PAC sensor hybrid histidine kinase
BSR_Lac_LFCR_na_p_65545_18
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14037..14330
DNA (294bp) protein (98aa)
hypothetical protein n=1 Tax=Xanthomonadaceae RepID=UPI00029AA382
Putative uncharacterized protein {ECO:0000313|EMBL:EED39062.1}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;"
hypothetical protein
BSR_Lac_LFCR_na_p_65545_19
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14399..14662)
DNA (264bp) protein (88aa)
Uncharacterized protein n=7 Tax=Stenotrophomonas RepID=B2FLQ6_STRMK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCH11075.1}; TaxID=1163399 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia D457.;"
BSR_Lac_LFCR_na_p_65545_20
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14819..15883
DNA (1065bp) protein (355aa)
16S rRNA methyltransferase n=1 Tax=Xanthomonadaceae RepID=UPI00029AC171
Ribosomal RNA small subunit methyltransferase C {ECO:0000313|EMBL:CCP09560.1}; TaxID=1118156 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia SKK35.;"
ribosomal RNA small subunit methyltransferase C
BSR_Lac_LFCR_na_p_65545_21
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15880..16581
DNA (702bp) protein (234aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=1118156 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia SKK35.;"
Pseudouridine synthase n=1 Tax=Stenotrophomonas maltophilia SKK35 RepID=M5CIL6_STEMA
pseudouridine synthase Rsu
BSR_Lac_LFCR_na_p_65545_22
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16578..17261
DNA (684bp) protein (228aa)
Putative halacid dehalogenase hydrolase n=1 Tax=Stenotrophomonas maltophilia (strain K279a) RepID=B2FLQ9_STRMK
haloacid dehalogenase
Putative halacid dehalogenase hydrolase {ECO:0000313|EMBL:CAQ44163.1}; TaxID=522373 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (strain K279a).;"
BSR_Lac_LFCR_na_p_65545_23
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17355..18563)
DNA (1209bp) protein (403aa)
fabB; 3-oxoacyl-ACP synthase (EC:2.3.1.41)
3-oxoacyl-[acyl-carrier-protein] synthase, KASI {ECO:0000313|EMBL:CCH11079.1}; EC=2.3.1.41 {ECO:0000313|EMBL:CCH11079.1};; TaxID=1163399 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia D457.;"
3-oxoacyl-[acyl-carrier-protein] synthase, KASI n=1 Tax=Stenotrophomonas maltophilia D457 RepID=I0KJ40_STEMA
BSR_Lac_LFCR_na_p_65545_24
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18563..19078)
DNA (516bp) protein (172aa)
3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase {ECO:0000255|HAMAP-Rule:MF_00405}; EC=4.2.1.59 {ECO:0000255|HAMAP-Rule:MF_00405};; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabA {ECO:0000255|HAMAP-Rule:MF_00405}; Beta-hydroxydecanoyl thioester dehydrase {ECO:0000255|HAMAP-Rule:MF_00405}; Trans-2-decenoyl-[acyl-carrier-protein] isomerase {ECO:0000255|HAMAP-Rule:MF_00405}; EC=5.3.3.14 {ECO:0000255|HAMAP-Rule:MF_00405};; TaxID=522373 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (strain K279a).;"
3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase n=2 Tax=Stenotrophomonas maltophilia RepID=FABA_STRMK
fabA; 3-hydroxydecanoyl-ACP dehydratase
BSR_Lac_LFCR_na_p_65545_25
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19270..20340
DNA (1071bp) protein (357aa)
DNA polymerase IV (EC:2.7.7.7)
DNA polymerase IV {ECO:0000256|HAMAP-Rule:MF_01113}; Short=Pol IV {ECO:0000256|HAMAP-Rule:MF_01113};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01113};; TaxID=868597 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia JV3.;"
DNA polymerase IV n=1 Tax=Stenotrophomonas maltophilia JV3 RepID=G0JW54_STEMA
Displaying 25 items

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