ggKbase home page

BSR_Lac_UAPBR_inlet_at_94184

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BSR_Lac_UAPBR_inlet_at_94184_1
BJP_08E140C01_Desulfomicrobium_58_14, Desulfomicrobium, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..621)
DNA (621bp) protein (207aa)
polar amino acid ABC transporter permease n=1 Tax=Desulfovibrio desulfuricans RepID=UPI0003B3454A
polar amino acid ABC transporter, inner membrane subunit
Tax=BJP_08E140C01_Desulfomicrobium_58_14
BSR_Lac_UAPBR_inlet_at_94184_2
BJP_08E140C01_Desulfomicrobium_58_14, Desulfomicrobium, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(618..1292)
DNA (675bp) protein (225aa)
Amino acid ABC transporter permease n=2 Tax=Rhodospirillum rubrum RepID=G2TGQ2_RHORU
amino acid ABC transporter permease
Tax=BJP_08E140C01_Desulfomicrobium_58_14
BSR_Lac_UAPBR_inlet_at_94184_3
BJP_08E140C01_Desulfomicrobium_58_14, Desulfomicrobium, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1310..2176)
DNA (867bp) protein (289aa)
hypothetical protein n=1 Tax=Desulfovibrio desulfuricans RepID=UPI0003B6E815
ABC transporter substrate-binding protein
Tax=BJP_08E140C01_Desulfomicrobium_58_14
BSR_Lac_UAPBR_inlet_at_94184_4
BJP_08E140C01_Desulfomicrobium_58_14, Desulfomicrobium, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2578..3138)
DNA (561bp) protein (187aa)
Transcriptional regulator protein n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8JF84_HYPSM
transcriptional regulator protein
Tax=BJP_08E140C01_Desulfomicrobium_58_14
BSR_Lac_UAPBR_inlet_at_94184_5
Desulfovibrio vulgaris, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3606..4907
DNA (1302bp) protein (434aa)
Cytochrome bd ubiquinol oxidase subunit I n=1 Tax=Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637) RepID=B8DMX3_DESVM
cytochrome bd ubiquinol oxidase subunit I
Cytochrome bd ubiquinol oxidase subunit I {ECO:0000313|EMBL:ACL09413.1}; TaxID=883 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637).;"
BSR_Lac_UAPBR_inlet_at_94184_6
Desulfovibrio vulgaris, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4962..5987
DNA (1026bp) protein (342aa)
cytochrome d ubiquinol oxidase subunit II (EC:3.1.3.1)
Cytochrome d ubiquinol oxidase, subunit II {ECO:0000313|EMBL:ACL09412.1}; EC=3.1.3.1 {ECO:0000313|EMBL:ACL09412.1};; TaxID=883 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637).;"
Cytochrome d ubiquinol oxidase, subunit II n=1 Tax=Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637) RepID=B8DMX2_DESVM
BSR_Lac_UAPBR_inlet_at_94184_7
Desulfovibrio vulgaris, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6165..6650)
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637) RepID=B8DMW5_DESVM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACL09405.1}; TaxID=883 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637).;"
BSR_Lac_UAPBR_inlet_at_94184_8
Desulfovibrio vulgaris, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6861..8051)
DNA (1191bp) protein (397aa)
Uncharacterized protein n=2 Tax=Desulfovibrio vulgaris RepID=E3IS06_DESVR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAS97738.1}; TaxID=882 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB; 8303).;"
BSR_Lac_UAPBR_inlet_at_94184_9
Desulfovibrio vulgaris, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8073..8609)
DNA (537bp) protein (179aa)
Hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit n=1 Tax=Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637) RepID=B8DMW3_DESVM
hydro-lyase, Fe-S type, tartrate/fumarate subfamily, subunit beta
Hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit {ECO:0000313|EMBL:ACL09403.1}; TaxID=883 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637).;"
BSR_Lac_UAPBR_inlet_at_94184_10
Desulfovibrio sp. A2, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8721..9560)
DNA (840bp) protein (280aa)
fumarate hydratase (EC:4.2.1.2)
Fumarate hydratase family protein n=1 Tax=Desulfovibrio sp. A2 RepID=G2HAR8_9DELT
Fumarate hydratase family protein {ECO:0000313|EMBL:EGY24931.1}; TaxID=298701 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. A2.;"
BSR_Lac_UAPBR_inlet_at_94184_11
Desulfovibrio vulgaris, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9822..10565)
DNA (744bp) protein (248aa)
Succinate dehydrogenase iron-sulfur subunit {ECO:0000256|RuleBase:RU361237}; EC=1.3.5.1 {ECO:0000256|RuleBase:RU361237};; TaxID=883 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637).;"
Succinate dehydrogenase and fumarate reductase iron-sulfur protein n=1 Tax=Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637) RepID=B8DMW1_DESVM
frdB; fumarate reductase iron-sulfur subunit
BSR_Lac_UAPBR_inlet_at_94184_12
Desulfovibrio vulgaris, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10767..12584)
DNA (1818bp) protein (606aa)
fumarate reductase flavoprotein subunit (EC:1.3.99.1)
Succinate dehydrogenase or fumarate reductase, flavoprotein subunit {ECO:0000313|EMBL:ACL09400.1}; EC=1.3.99.1 {ECO:0000313|EMBL:ACL09400.1};; TaxID=883 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637).;"
Succinate dehydrogenase or fumarate reductase, flavoprotein subunit n=1 Tax=Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637) RepID=B8DMW0_DESVM
BSR_Lac_UAPBR_inlet_at_94184_13
Desulfovibrio vulgaris, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12598..13251)
DNA (654bp) protein (218aa)
Fumarate reductase respiratory complex transmembrane subunit n=1 Tax=Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637) RepID=B8DMV9_DESVM
fumarate reductase respiratory complex transmembrane subunit
Fumarate reductase respiratory complex transmembrane subunit {ECO:0000313|EMBL:ACL09399.1}; TaxID=883 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637).;"
BSR_Lac_UAPBR_inlet_at_94184_14
Desulfovibrio sp. A2, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13662..13853
DNA (192bp) protein (64aa)
Putative uncharacterized protein n=1 Tax=Desulfovibrio sp. A2 RepID=G2HAR3_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EGY24926.1}; TaxID=298701 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. A2.;"
hypothetical protein
BSR_Lac_UAPBR_inlet_at_94184_15
Desulfovibrio vulgaris, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13951..14730)
DNA (780bp) protein (260aa)
exodeoxyribonuclease III (EC:4.2.99.18)
Exodeoxyribonuclease III {ECO:0000313|EMBL:ACL09397.1}; EC=4.2.99.18 {ECO:0000313|EMBL:ACL09397.1};; TaxID=883 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637).;"
Exodeoxyribonuclease III n=1 Tax=Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637) RepID=B8DMV7_DESVM
BSR_Lac_UAPBR_inlet_at_94184_16
Desulfovibrio sp. A2, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14770..15210)
DNA (441bp) protein (147aa)
Hemerythrin-like metal-binding domain protein n=1 Tax=Desulfovibrio sp. A2 RepID=G2HAR1_9DELT
Hemerythrin-like metal-binding domain protein {ECO:0000313|EMBL:EGY24924.1}; TaxID=298701 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. A2.;"
hemerythrin-like metal-binding protein
BSR_Lac_UAPBR_inlet_at_94184_17
Desulfovibrio vulgaris, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15363..17408)
DNA (2046bp) protein (682aa)
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637) RepID=B8DMV5_DESVM
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) {ECO:0000313|EMBL:ACL09395.1}; TaxID=883 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637).;"
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
BSR_Lac_UAPBR_inlet_at_94184_18
Desulfovibrio sp. A2, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17806..19548
DNA (1743bp) protein (581aa)
Integral membrane protein MviN n=1 Tax=Desulfovibrio sp. A2 RepID=G2HAQ8_9DELT
Integral membrane protein MviN {ECO:0000313|EMBL:EGY24921.1}; TaxID=298701 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. A2.;"
integral membrane protein MviN
BSR_Lac_UAPBR_inlet_at_94184_19
Desulfovibrio sp. A2, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19659..22826
DNA (3168bp) protein (1056aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=298701 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. A2.;"
multi-sensor hybrid histidine kinase (EC:2.7.13.3)
HAMP domain protein n=1 Tax=Desulfovibrio sp. A2 RepID=G2HAQ7_9DELT
BSR_Lac_UAPBR_inlet_at_94184_trna_1
unknown

Not on your lists

comp(23150..23222)
DNA (73bp)
transferRNA His
BSR_Lac_UAPBR_inlet_at_94184_20
Desulfovibrio vulgaris, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23438..24691
DNA (1254bp) protein (418aa)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase {ECO:0000255|HAMAP-Rule:MF_00111}; EC=2.5.1.7 {ECO:0000255|HAMAP-Rule:MF_00111};; Enoylpyruvate transferase {ECO:0000255|HAMAP-Rule:MF_00111}; UDP-N-acetylglucosamine enolpyruvyl transferase {ECO:0000255|HAMAP-Rule:MF_00111}; Short=EPT {ECO:0000255|HAMAP-Rule:MF_00111};; TaxID=883 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637).;"
UDP-N-acetylglucosamine 1-carboxyvinyltransferase n=1 Tax=Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637) RepID=MURA_DESVM
UDP-N-acetylglucosamine 1-carboxyvinyltransferase
BSR_Lac_UAPBR_inlet_at_94184_21
Desulfovibrio sp. A2, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24779..27523
DNA (2745bp) protein (915aa)
ComEC/Rec2-related domain protein n=1 Tax=Desulfovibrio sp. A2 RepID=G2HAQ5_9DELT
ComEC/Rec2-related domain protein {ECO:0000313|EMBL:EGY24918.1}; TaxID=298701 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. A2.;"
ComEC/Rec2-like protein
BSR_Lac_UAPBR_inlet_at_94184_22
Desulfovibrio alaskensis, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27544..28401)
DNA (858bp) protein (286aa)
Formamidopyrimidine-DNA glycosylase {ECO:0000256|SAAS:SAAS00020854}; EC=3.2.2.- {ECO:0000256|SAAS:SAAS00275239};; EC=3.2.2.23 {ECO:0000256|SAAS:SAAS00020832};; EC=4.2.99.18 {ECO:0000256|SAAS:SAAS00054019};; TaxID=207559 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio alaskensis (strain G20) (Desulfovibrio desulfuricans; (strain G20)).;"
Formamidopyrimidine-DNA glycosylase n=1 Tax=Desulfovibrio desulfuricans (strain G20) RepID=Q315Q3_DESDG
formamidopyrimidine-DNA glycosylase
BSR_Lac_UAPBR_inlet_at_94184_23
Desulfovibrio vulgaris, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28532..30049)
DNA (1518bp) protein (506aa)
Uncharacterized protein n=2 Tax=Desulfovibrio vulgaris RepID=B8DMU8_DESVM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACL09388.1}; TaxID=883 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637).;"
BSR_Lac_UAPBR_inlet_at_94184_24
Desulfovibrio vulgaris, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30040..30264)
DNA (225bp) protein (75aa)
Phenylacetate-coenzyme A ligase, putative n=3 Tax=Desulfovibrio RepID=B8DMU7_DESVM
phenylacetate-coenzyme A ligase
Phenylacetate-coenzyme A ligase, putative {ECO:0000313|EMBL:BAF62532.1}; Flags: Fragment;; TaxID=881 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio vulgaris.;"
Displaying 25 items

View Taxonomy