ggKbase home page

BSR_Lac_UAPBR_inlet_at_31560

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BSR_Lac_UAPBR_inlet_at_31560_trna_1
unknown

Not on your lists

213..302
DNA (90bp)
transferRNA Ser
BSR_Lac_UAPBR_inlet_at_31560_1
unknown

Not on your lists

comp(545..796)
DNA (252bp) protein (84aa)

This feature has no annotations

BSR_Lac_UAPBR_inlet_at_31560_2
Ketogulonicigenium vulgare, Ketogulonicigenium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

801..1244
DNA (444bp) protein (148aa)
Uncharacterized protein n=2 Tax=Ketogulonicigenium vulgare RepID=F9Y932_KETVW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADO41863.1}; TaxID=880591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ketogulonicigenium.;" source="Ketogulonicigenium vulgare (strain Y25).;"
BSR_Lac_UAPBR_inlet_at_31560_3
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1244..2587
DNA (1344bp) protein (448aa)
Resolvase n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3X0V7_9BRAD
Resolvase {ECO:0000313|EMBL:EAQ34133.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
site-specific recombinase
BSR_Lac_UAPBR_inlet_at_31560_4
Endozoicomonas numazuensis, Endozoicomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2563..2970
DNA (408bp) protein (136aa)
Putative bacteriophage-related protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TY18_9PROT
Uncharacterized protein {ECO:0000313|EMBL:KEQ18057.1}; TaxID=1137799 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Hahellaceae; Endozoicomonas.;" source="Endozoicomonas numazuensis.;"
Putative bacteriophage-related protein
BSR_Lac_UAPBR_inlet_at_31560_5
unknown

Not on your lists

3199..3855
DNA (657bp) protein (219aa)

This feature has no annotations

BSR_Lac_UAPBR_inlet_at_31560_6
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4082..4312
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F155_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CDP52013.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
hypothetical protein
BSR_Lac_UAPBR_inlet_at_31560_7
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4342..5394
DNA (1053bp) protein (351aa)
Uncharacterized protein n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8INV4_METNO
Uncharacterized protein {ECO:0000313|EMBL:CDX31399.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
hypothetical protein
BSR_Lac_UAPBR_inlet_at_31560_8
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5381..6004
DNA (624bp) protein (208aa)
Putative uncharacterized protein n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3SUF8_NITWN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABA04083.1}; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391).;"
BSR_Lac_UAPBR_inlet_at_31560_9
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6001..6210
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8U217_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EDP61730.1}; TaxID=331869 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
hypothetical protein
BSR_Lac_UAPBR_inlet_at_31560_10
Paracoccus sp. 39524, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6197..6592
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=Rubellimicrobium thermophilum DSM 16684 RepID=S9QSD2_9RHOB
RNA polymerase subunit sigma {ECO:0000313|EMBL:KGJ17845.1}; TaxID=1525718 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus sp. 39524.;"
hypothetical protein
BSR_Lac_UAPBR_inlet_at_31560_11
Rhodobacteraceae bacterium PD-2, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6882..8042
DNA (1161bp) protein (387aa)
Cytosine-specific methyltransferase n=1 Tax=Azospirillum sp. CAG:239 RepID=R6JSJ6_9PROT
putative site-specific DNA methylase
Contig9, whole genome shotgun sequence {ECO:0000313|EMBL:KID12458.1}; TaxID=1169855 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae.;" source="Rhodobacteraceae bacterium PD-2.;"
BSR_Lac_UAPBR_inlet_at_31560_12
RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated, Acidobacteria, Bacteria

Not on your lists

8049..8831
DNA (783bp) protein (261aa)
transcriptional regulator n=1 Tax=Caldimonas manganoxidans RepID=UPI0003639120
DNA methylase N-4/N-6 domain-containing protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated
BSR_Lac_UAPBR_inlet_at_31560_13
Rhodomicrobium vannielii, Rhodomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8903..9259)
DNA (357bp) protein (119aa)
helix-turn-helix domain-containing protein n=1 Tax=Gluconobacter frateurii RepID=UPI00029A4D0F
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:ADP71670.1}; TaxID=648757 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Rhodomicrobium.;" source="Rhodomicrobium vannielii (strain ATCC 17100 / ATH 3.1.1 / DSM 162 /; LMG 4299).;"
BSR_Lac_UAPBR_inlet_at_31560_14
unknown

Not on your lists

comp(9256..9540)
DNA (285bp) protein (95aa)

This feature has no annotations

BSR_Lac_UAPBR_inlet_at_31560_15
Micavibrio aeruginosavorus, Micavibrio, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9811..10443)
DNA (633bp) protein (211aa)
Uncharacterized protein n=1 Tax=Micavibrio aeruginosavorus EPB RepID=M4VJV8_9PROT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGH98351.1}; TaxID=349215 species="Bacteria; Proteobacteria; Alphaproteobacteria; Micavibrio.;" source="Micavibrio aeruginosavorus EPB.;"
BSR_Lac_UAPBR_inlet_at_31560_16
unknown

Not on your lists

comp(10476..10826)
DNA (351bp) protein (117aa)

This feature has no annotations

BSR_Lac_UAPBR_inlet_at_31560_17
unknown

Not on your lists

comp(10845..11177)
DNA (333bp) protein (111aa)

This feature has no annotations

BSR_Lac_UAPBR_inlet_at_31560_18
unknown

Not on your lists

comp(11190..11360)
DNA (171bp) protein (57aa)

This feature has no annotations

BSR_Lac_UAPBR_inlet_at_31560_19
Micavibrio aeruginosavorus, Micavibrio, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11689..12339
DNA (651bp) protein (217aa)
Uncharacterized protein n=1 Tax=Micavibrio aeruginosavorus EPB RepID=M4VGX7_9PROT
Uncharacterized protein {ECO:0000313|EMBL:AGH97306.1}; TaxID=349215 species="Bacteria; Proteobacteria; Alphaproteobacteria; Micavibrio.;" source="Micavibrio aeruginosavorus EPB.;"
helix-turn-helix family protein
BSR_Lac_UAPBR_inlet_at_31560_20
unknown

Not on your lists

12336..13088
DNA (753bp) protein (251aa)

This feature has no annotations

BSR_Lac_UAPBR_inlet_at_31560_21
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13090..13974
DNA (885bp) protein (295aa)
hypothetical protein n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI00036103BC
Uncharacterized protein {ECO:0000313|EMBL:KEC72253.1}; TaxID=1408223 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. phaseoli CCGM1.;"
GCN5-related N-acetyltransferase protein
BSR_Lac_UAPBR_inlet_at_31560_22
Legionella pneumophila, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13989..14885
DNA (897bp) protein (299aa)
Acetyltransferase n=1 Tax=Legionella pneumophila (strain Corby) RepID=A5I9K1_LEGPC
acetyltransferase
Acetyltransferase {ECO:0000313|EMBL:ADG23294.1}; TaxID=423212 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella pneumophila serogroup 1 (strain 2300/99 Alcoy).;"
BSR_Lac_UAPBR_inlet_at_31560_23
R_OP11_Levybacteria_37_17, Levybacteria, Microgenomates, Bacteria

Not on your lists

14882..16081
DNA (1200bp) protein (400aa)
Putative uncharacterized protein n=1 Tax=Actinoplanes friuliensis RepID=A3KFH8_9ACTO id=42152 bin=ACD37 species=Actinoplanes friuliensis genus=Actinoplanes taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=ACD37 organism_group=OP11 (Microgenomates) organism_desc=OP11
putative transport protein
Tax=RIFCSPHIGHO2_01_FULL_OP11_Levybacteria_37_17_curated
BSR_Lac_UAPBR_inlet_at_31560_24
Tolypothrix sp. PCC 7601, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(16078..16725)
DNA (648bp) protein (216aa)
Hydrolase n=2 Tax=Labrenzia RepID=U7GJK9_9RHOB
Haloacid dehalogenase {ECO:0000313|EMBL:EKE96980.1}; TaxID=1188 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix sp. PCC 7601.;"
hypothetical protein
BSR_Lac_UAPBR_inlet_at_31560_25

Not on your lists

comp(16725..17360)
DNA (636bp) protein (212aa)
Orotate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00216337}; Short=OPRT {ECO:0000256|HAMAP-Rule:MF_01208};; Short=OPRTase {ECO:0000256|HAMAP-Rule:MF_01208};; EC=2.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00216337};; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Orotate phosphoribosyltransferase n=1 Tax=uncultured bacterium RepID=K2DE67_9BACT
phosphoribosyltransferase
BSR_Lac_UAPBR_inlet_at_31560_26
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(17372..18250)
DNA (879bp) protein (293aa)
Orotidine 5'-phosphate decarboxylase {ECO:0000256|RuleBase:RU000512}; EC=4.1.1.23 {ECO:0000256|RuleBase:RU000512};; TaxID=1434107 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri 3.;"
hypothetical protein n=1 Tax=Rhizobium giardinii RepID=UPI000364CE2D
orotidine 5-phosphate decarboxylase
BSR_Lac_UAPBR_inlet_at_31560_27
GWC1_OD1_48_11, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

comp(18273..18698)
DNA (426bp) protein (142aa)
NUDIX hydrolase id=3501696 bin=GWA1_ZB2_49_26 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
NUDIX hydrolase {ECO:0000313|EMBL:KKU93154.1}; TaxID=1619027 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Yanofskybacteria) bacterium GW2011_GWC1_48_11.;"
putative hydrolase
BSR_Lac_UAPBR_inlet_at_31560_28
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18832..19089)
DNA (258bp) protein (86aa)
hypothetical protein n=1 Tax=Methylococcus capsulatus RepID=UPI000368D805
Uncharacterized protein {ECO:0000313|EMBL:CDP52013.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
terminase small subunit (Gp1)
Displaying 29 items

View Taxonomy