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BSR_Lac_UAPBR_inlet_at_116457

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BSR_Lac_UAPBR_inlet_at_116457_1
unknown

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1..144
DNA (144bp) protein (48aa)

This feature has no annotations

BSR_Lac_UAPBR_inlet_at_116457_2
Symbiobacterium thermophilum, Symbiobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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353..1243
DNA (891bp) protein (297aa)
Conserved domain protein n=1 Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=Q67L81_SYMTH
hypothetical protein
Conserved domain protein {ECO:0000313|EMBL:BAD41565.1}; TaxID=292459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Symbiobacteriaceae; Symbiobacterium.;" source="Symbiobacterium thermophilum (strain T / IAM 14863).;"
BSR_Lac_UAPBR_inlet_at_116457_3
Oscillibacter sp. CAG:155, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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1453..1623
DNA (171bp) protein (57aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:155 RepID=R6TP27_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC69646.1}; TaxID=1262910 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:155.;"
BSR_Lac_UAPBR_inlet_at_116457_4
Clostridium tyrobutyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1682..1975)
DNA (294bp) protein (98aa)
hypothetical protein n=1 Tax=Clostridium tyrobutyricum RepID=UPI0002D31BC6
Predicted membrane protein {ECO:0000313|EMBL:CDL91724.1}; TaxID=1408889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium tyrobutyricum DIVETGP.;"
hypothetical protein
BSR_Lac_UAPBR_inlet_at_116457_5
Clostridium autoethanogenum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1972..2496)
DNA (525bp) protein (175aa)
hypothetical protein n=1 Tax=Clostridium tyrobutyricum RepID=UPI00036C4B78
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGY76699.1}; TaxID=1341692 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium autoethanogenum DSM 10061.;"
BSR_Lac_UAPBR_inlet_at_116457_6
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2477..2908)
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Clostridium sporogenes ATCC 15579 RepID=J7SZW4_CLOSG
Uncharacterized protein {ECO:0000313|EMBL:KIN81845.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
hypothetical protein
BSR_Lac_UAPBR_inlet_at_116457_7
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2901..3422)
DNA (522bp) protein (174aa)
RNA polymerase sigma factor n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MRM4_CLOSA
RNA polymerase sigma factor
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
BSR_Lac_UAPBR_inlet_at_116457_8
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3558..4409)
DNA (852bp) protein (284aa)
Pyridoxal kinase {ECO:0000256|SAAS:SAAS00088591}; EC=2.7.1.35 {ECO:0000256|SAAS:SAAS00088591};; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
pyridoxal kinase n=1 Tax=Clostridium sporosphaeroides RepID=UPI000368BBF9
pyridoxine kinase
BSR_Lac_UAPBR_inlet_at_116457_9
[Clostridium] straminisolvens, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4647..5492
DNA (846bp) protein (282aa)
Cof-like hydrolase n=7 Tax=Clostridium thermocellum RepID=A3DJZ1_CLOTH
Uncharacterized protein {ECO:0000313|EMBL:GAE90448.1}; TaxID=1294263 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] straminisolvens JCM 21531.;"
Cof-like hydrolase
BSR_Lac_UAPBR_inlet_at_116457_10
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6161..7717)
DNA (1557bp) protein (519aa)
Stage V sporulation protein B n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CED1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF56855.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
stage V sporulation protein B
BSR_Lac_UAPBR_inlet_at_116457_11
Desulfovibrio sp. 6_1_46AFAA, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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8281..9378
DNA (1098bp) protein (366aa)
Phosphonoacetate hydrolase n=1 Tax=Desulfovibrio sp. 3_1_syn3 RepID=D9YEE6_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EGW52356.1}; TaxID=665942 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. 6_1_46AFAA.;"
type I phosphodiesterase/nucleotide pyrophosphatase
BSR_Lac_UAPBR_inlet_at_116457_12
[Clostridium] termitidis, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9582..10298
DNA (717bp) protein (239aa)
flavin reductase n=1 Tax=Clostridium arbusti RepID=UPI000287C624
NADPH-dependent FMN reductase {ECO:0000313|EMBL:EMS73918.1}; TaxID=1195236 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] termitidis CT1112.;"
hypothetical protein
BSR_Lac_UAPBR_inlet_at_116457_13
Campylobacter coli, Campylobacter, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

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comp(10480..11796)
DNA (1317bp) protein (439aa)
Uncharacterized protein n=2 Tax=Campylobacter coli RepID=Q4HEF0_CAMCO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHK77412.1}; TaxID=1183379 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Campylobacteraceae; Campylobacter.;" source="Campylobacter coli RM4661.;"
BSR_Lac_UAPBR_inlet_at_116457_14
Hyperthermus butylicus, Hyperthermus, Desulfurococcales, Thermoprotei, Crenarchaeota, Archaea

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comp(11910..12893)
DNA (984bp) protein (328aa)
Glyoxylate reductase n=1 Tax=Hyperthermus butylicus (strain DSM 5456 / JCM 9403) RepID=A2BL50_HYPBU
glyoxylate reductase
Glyoxylate reductase {ECO:0000313|EMBL:ABM80711.1}; TaxID=415426 species="Archaea; Crenarchaeota; Thermoprotei; Desulfurococcales; Pyrodictiaceae; Hyperthermus.;" source="Hyperthermus butylicus (strain DSM 5456 / JCM 9403).;"
BSR_Lac_UAPBR_inlet_at_116457_15
Dethiobacter alkaliphilus, Dethiobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12893..13885)
DNA (993bp) protein (331aa)
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GHE4_9FIRM
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding {ECO:0000313|EMBL:EEG77150.1}; TaxID=555088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Syntrophomonadaceae; Dethiobacter.;" source="Dethiobacter alkaliphilus AHT 1.;"
oxidoreductase
BSR_Lac_UAPBR_inlet_at_116457_16
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14048..15541)
DNA (1494bp) protein (498aa)
carboxyl-terminal protease (EC:3.4.21.102)
C-terminal peptidase (Prc) n=1 Tax=Clostridium sp. CAG:127 RepID=R5PLB0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KGG80981.1}; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaerobacter.;" source="Caloranaerobacter azorensis H53214.;"
BSR_Lac_UAPBR_inlet_at_116457_17
[Clostridium] cellulosi, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(15710..17362)
DNA (1653bp) protein (551aa)
argS; Arginine-tRNA ligase (EC:6.1.1.19)
Arginine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00123}; EC=6.1.1.19 {ECO:0000256|HAMAP-Rule:MF_00123};; Arginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00123}; TaxID=29343 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] cellulosi.;"
Arginine--tRNA ligase n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VXU5_9CLOT
BSR_Lac_UAPBR_inlet_at_116457_18
Ruminiclostridium thermocellum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(17376..17840)
DNA (465bp) protein (155aa)
hypothetical protein n=1 Tax=Acetivibrio cellulolyticus RepID=UPI0001E2E6A9
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABN53154.1}; TaxID=203119 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium thermocellum (strain ATCC 27405 / DSM 1237 / NBRC 103400 /; NCIMB 10682 / NRRL B-4536 / VPI 7372) (Ruminiclostridium; thermocellum).;"
BSR_Lac_UAPBR_inlet_at_116457_19
Clostridium sp. CAG:1024, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(17957..18772)
DNA (816bp) protein (272aa)
Glutamate racemase {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00031911}; EC=5.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00041166};; TaxID=1262770 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1024.;"
murI; glutamate racemase (EC:5.1.1.3)
Glutamate racemase n=1 Tax=Clostridium sp. CAG:1024 RepID=R5AG84_9CLOT
BSR_Lac_UAPBR_inlet_at_116457_20
[Clostridium] cellulosi, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(18911..19696)
DNA (786bp) protein (262aa)
ddl; D-alanine-D-alanine ligase (EC:6.3.2.4)
D-alanine--D-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732}; EC=6.3.2.4 {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732};; D-Ala-D-Ala ligase {ECO:0000256|HAMAP-Rule:MF_00047}; D-alanylalanine synthetase {ECO:0000256|HAMAP-Rule:MF_00047}; TaxID=29343 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] cellulosi.;"
D-alanine--D-alanine ligase n=1 Tax=Clostridium sp. MSTE9 RepID=J0X0T4_9CLOT
Displaying 20 items

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