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BSR_Lac_UAPBR_inlet_at_35790

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BSR_Lac_UAPBR_inlet_at_35790_1
unknown

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comp(3..92)
DNA (90bp) protein (30aa)

This feature has no annotations

BSR_Lac_UAPBR_inlet_at_35790_trna_2
unknown

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comp(770..853)
DNA (84bp)
transferRNA Leu
BSR_Lac_UAPBR_inlet_at_35790_trna_1
unknown

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comp(888..968)
DNA (81bp)
transferRNA Leu
BSR_Lac_UAPBR_inlet_at_35790_2
[Clostridium] clariflavum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1136..3340)
DNA (2205bp) protein (735aa)
peptidase M4 n=1 Tax=Acetivibrio cellulolyticus RepID=UPI0001E30545
Peptidase propeptide domain-containing protein
Peptidase propeptide domain-containing protein {ECO:0000313|EMBL:AEV68977.1}; Flags: Precursor;; TaxID=720554 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45).;"
BSR_Lac_UAPBR_inlet_at_35790_3
Desulfosporosinus sp. I2, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3439..4104)
DNA (666bp) protein (222aa)
Uncharacterized membrane protein n=1 Tax=Desulfosporosinus youngiae DSM 17734 RepID=H5XSA5_9FIRM
SanA protein {ECO:0000313|EMBL:KJR49513.1}; TaxID=1617025 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus sp. I2.;"
membrane protein
BSR_Lac_UAPBR_inlet_at_35790_4
BJP_IG2157_Clostridiales_35_16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4445..5515)
DNA (1071bp) protein (357aa)
3-isopropylmalate dehydrogenase (EC:1.1.1.85)
3-isopropylmalate dehydrogenase n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TTR5_ALKMQ
Tax=BJP_IG2157_Clostridiales_35_16
BSR_Lac_UAPBR_inlet_at_35790_5
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5515..6012)
DNA (498bp) protein (166aa)
3-isopropylmalate dehydratase small subunit {ECO:0000256|HAMAP-Rule:MF_01032}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01032};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01032}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01032}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
3-isopropylmalate dehydratase, small subunit (EC:4.2.1.33)
3-isopropylmalate dehydratase small subunit n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PMS9_9FIRM
BSR_Lac_UAPBR_inlet_at_35790_6
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6086..7345)
DNA (1260bp) protein (420aa)
3-isopropylmalate dehydratase large subunit {ECO:0000256|HAMAP-Rule:MF_01027}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01027};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01027}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01027}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
leuC; 3-isopropylmalate dehydratase large subunit (EC:4.2.1.33)
3-isopropylmalate dehydratase large subunit n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QKS0_9CLOT
BSR_Lac_UAPBR_inlet_at_35790_7
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7360..8943)
DNA (1584bp) protein (528aa)
putative AIPM/Hcit synthase family transferase aq_356 (EC:2.3.3.-)
2-isopropylmalate synthase/homocitrate synthase family protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VNV2_9CLOT
2-isopropylmalate synthase/homocitrate synthase family protein {ECO:0000313|EMBL:EDO63012.1}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
BSR_Lac_UAPBR_inlet_at_35790_8
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8980..10491)
DNA (1512bp) protein (504aa)
2-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_01025, ECO:0000256|SAAS:SAAS00049060}; EC=2.3.3.13 {ECO:0000256|HAMAP-Rule:MF_01025, ECO:0000256|SAAS:SAAS00085331};; Alpha-IPM synthase {ECO:0000256|HAMAP-Rule:MF_01025}; Alpha-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_01025}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
leuA3; 2-isopropylmalate synthase (EC:2.3.3.13)
2-isopropylmalate synthase n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W4B8_9CLOT
BSR_Lac_UAPBR_inlet_at_35790_9
unknown

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comp(10982..11266)
DNA (285bp) protein (95aa)

This feature has no annotations

BSR_Lac_UAPBR_inlet_at_35790_10
Oscillibacter valericigenes, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11322..11849)
DNA (528bp) protein (176aa)
Uncharacterized protein n=1 Tax=Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 / Sjm18-20) RepID=G4KQ53_OSCVS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAK99687.1}; TaxID=693746 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 /; Sjm18-20).;"
BSR_Lac_UAPBR_inlet_at_35790_11
Ethanoligenens harbinense, Ethanoligenens, Clostridiales, Clostridia, Firmicutes, Bacteria

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12399..13412
DNA (1014bp) protein (338aa)
phospho-2-dehydro-3-deoxyheptonate aldolase (EC:2.5.1.54)
Phospho-2-dehydro-3-deoxyheptonate aldolase {ECO:0000313|EMBL:ADU28149.1}; EC=2.5.1.54 {ECO:0000313|EMBL:ADU28149.1};; TaxID=663278 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ethanoligenens.;" source="Ethanoligenens harbinense (strain DSM 18485 / JCM 12961 / CGMCC 1.5033; / YUAN-3).;"
Phospho-2-dehydro-3-deoxyheptonate aldolase n=1 Tax=Ethanoligenens harbinense (strain DSM 18485 / JCM 12961 / CGMCC 1.5033 / YUAN-3) RepID=E6U779_ETHHY
BSR_Lac_UAPBR_inlet_at_35790_12
Firmicutes bacterium CAG:94, Firmicutes, Bacteria

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13437..14492
DNA (1056bp) protein (352aa)
3-dehydroquinate synthase {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210858}; EC=4.2.3.4 {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210855};; TaxID=1262989 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:94.;"
aroB; 3-dehydroquinate synthase (EC:4.2.3.4)
3-dehydroquinate synthase n=1 Tax=Firmicutes bacterium CAG:94 RepID=R6YKT5_9FIRM
BSR_Lac_UAPBR_inlet_at_35790_13
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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14520..15620
DNA (1101bp) protein (367aa)
Chorismate synthase {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605}; Short=CS {ECO:0000256|HAMAP-Rule:MF_00300};; EC=4.2.3.5 {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605};; 5-enolpyruvylshikimate-3-phosphate phospholyase {ECO:0000256|HAMAP-Rule:MF_00300}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
chorismate synthase (EC:4.2.3.5)
Chorismate synthase n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W3P8_9CLOT
BSR_Lac_UAPBR_inlet_at_35790_14
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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15664..16791
DNA (1128bp) protein (376aa)
monofunctional chorismate mutase, gram positive-type, clade 2 (EC:4.2.1.51)
chorismate mutase n=1 Tax=Clostridium sporosphaeroides RepID=UPI000375383F
Putative chorismate mutase {ECO:0000313|EMBL:EJF38860.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
BSR_Lac_UAPBR_inlet_at_35790_15
Ruminiclostridium thermocellum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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16824..17849
DNA (1026bp) protein (342aa)
phospho-2-dehydro-3-deoxyheptonate aldolase (EC:2.5.1.54)
Phospho-2-dehydro-3-deoxyheptonate aldolase {ECO:0000313|EMBL:ABN53016.1}; EC=2.5.1.54 {ECO:0000313|EMBL:ABN53016.1};; TaxID=203119 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium thermocellum (strain ATCC 27405 / DSM 1237 / NBRC 103400 /; NCIMB 10682 / NRRL B-4536 / VPI 7372) (Ruminiclostridium; thermocellum).;"
Phospho-2-dehydro-3-deoxyheptonate aldolase n=6 Tax=Clostridium thermocellum RepID=E6UPJ8_CLOTL
BSR_Lac_UAPBR_inlet_at_35790_16
[Clostridium] clariflavum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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17854..18951
DNA (1098bp) protein (366aa)
Prephenate dehydrogenase n=1 Tax=Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45) RepID=G8LT50_CLOCD
prephenate dehydrogenase
Prephenate dehydrogenase {ECO:0000313|EMBL:AEV67254.1}; Flags: Precursor;; TaxID=720554 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45).;"
BSR_Lac_UAPBR_inlet_at_35790_17
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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18948..20225
DNA (1278bp) protein (426aa)
3-phosphoshikimate 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531}; EC=2.5.1.19 {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531};; 5-enolpyruvylshikimate-3-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00210}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
3-phosphoshikimate 1-carboxyvinyltransferase (EC:2.5.1.19)
3-phosphoshikimate 1-carboxyvinyltransferase n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W4K3_9CLOT
BSR_Lac_UAPBR_inlet_at_35790_18
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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20230..21624
DNA (1395bp) protein (465aa)
shikimate dehydrogenase (EC:1.1.1.25)
Shikimate 5-dehydrogenase n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W3G1_9CLOT
Shikimate 5-dehydrogenase {ECO:0000313|EMBL:EOQ39440.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
BSR_Lac_UAPBR_inlet_at_35790_19
Paenibacillus sp. FSL R7-0331, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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21738..22589
DNA (852bp) protein (284aa)
Transcriptional regulator id=3889877 bin=GWC2_Clostridiales_40_7 species=unknown genus=Paenibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Clostridiales_40_7 organism_group=Firmicute
AraC family transcriptional regulator
AraC family transcriptional regulator {ECO:0000313|EMBL:AIQ51359.1}; TaxID=1536773 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. FSL R7-0331.;"
Displaying 21 items

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