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BSR_Lac_UAPBR_inlet_at_38887

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Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BSR_Lac_UAPBR_inlet_at_38887_1
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

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comp(8..586)
DNA (579bp) protein (193aa)
30S ribosomal protein S4 n=3 Tax=root RepID=R5AQV0_9FIRM
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
30S ribosomal protein S4
BSR_Lac_UAPBR_inlet_at_38887_2
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(664..1068)
DNA (405bp) protein (135aa)
30S ribosomal protein S11 n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PCT6_9FIRM
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
30S ribosomal protein S11
BSR_Lac_UAPBR_inlet_at_38887_3
Clostridium sp. CAG:557, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1087..1455)
DNA (369bp) protein (123aa)
30S ribosomal protein S13 n=1 Tax=Clostridium sp. CAG:557 RepID=R6GJL4_9CLOT
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=1262819 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:557.;"
rpsM; 30S ribosomal protein S13
BSR_Lac_UAPBR_inlet_at_38887_4
Thermoanaerobacterium xylanolyticum, Thermoanaerobacterium, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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comp(1770..1988)
DNA (219bp) protein (73aa)
Translation initiation factor IF-1 n=4 Tax=Thermoanaerobacterium RepID=D9TRX8_THETC
translation initiation factor IF-1
Translation initiation factor IF-1 {ECO:0000256|HAMAP-Rule:MF_00075}; TaxID=858215 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis; Thermoanaerobacterium.;" source="Thermoanaerobacterium xylanolyticum (strain ATCC 49914 / DSM 7097 /; LX-11).;"
BSR_Lac_UAPBR_inlet_at_38887_5
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

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comp(2003..2290)
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5ICY5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY39948.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
50S ribosomal protein L14
BSR_Lac_UAPBR_inlet_at_38887_6
Firmicutes bacterium CAG:110, Firmicutes, Bacteria

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comp(2280..3014)
DNA (735bp) protein (245aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974};; Peptidase M {ECO:0000256|HAMAP-Rule:MF_01974}; TaxID=1263000 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:110.;"
map; methionine aminopeptidase Map (EC:3.4.11.18)
Methionine aminopeptidase n=1 Tax=Firmicutes bacterium CAG:110 RepID=R5EQL1_9FIRM
BSR_Lac_UAPBR_inlet_at_38887_7
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3047..3685)
DNA (639bp) protein (213aa)
Adenylate kinase {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331}; Short=AK {ECO:0000256|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331};; ATP-AMP transphosphorylase {ECO:0000256|HAMAP-Rule:MF_00235}; ATP:AMP phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00235}; Adenylate monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00235}; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
adk; Adenylate kinase (EC:2.7.4.3)
Adenylate kinase n=1 Tax=Clostridium sp. CAG:1013 RepID=R5A6K6_9CLOT
BSR_Lac_UAPBR_inlet_at_38887_8
BJP_IG2069_Clostridiales_48_15, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3702..4979)
DNA (1278bp) protein (426aa)
Protein translocase subunit SecY n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PCU2_9FIRM
preprotein translocase subunit SecY
Tax=BJP_IG2069_Clostridiales_48_15
BSR_Lac_UAPBR_inlet_at_38887_9
Eubacterium sp. CAG:115, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4982..5422)
DNA (441bp) protein (147aa)
50S ribosomal protein L15 n=1 Tax=Eubacterium sp. CAG:115 RepID=R5LM36_9FIRM
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341, ECO:0000256|RuleBase:RU003889}; TaxID=1262878 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:115.;"
50S ribosomal protein L15
BSR_Lac_UAPBR_inlet_at_38887_10
Oscillibacter sp. CAG:155, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5443..5664)
DNA (222bp) protein (74aa)
50S ribosomal protein L30 n=1 Tax=Oscillibacter sp. CAG:155 RepID=R6U1C2_9FIRM
50S ribosomal protein L30 {ECO:0000256|HAMAP-Rule:MF_01371, ECO:0000256|SAAS:SAAS00082687}; TaxID=1262910 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:155.;"
rpmD; 50S ribosomal protein L30
BSR_Lac_UAPBR_inlet_at_38887_11
[Clostridium] cellulosi, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(5839..6312)
DNA (474bp) protein (158aa)
30S ribosomal protein S5 n=1 Tax=Clostridium sp. CAG:557 RepID=R6GTN4_9CLOT
rpsE; 30S ribosomal protein S5
30S ribosomal protein S5 {ECO:0000256|HAMAP-Rule:MF_01307, ECO:0000256|SAAS:SAAS00085406}; TaxID=29343 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] cellulosi.;"
BSR_Lac_UAPBR_inlet_at_38887_12
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6376..6735)
DNA (360bp) protein (120aa)
50S ribosomal protein L18 n=2 Tax=Clostridium RepID=A7VR37_9CLOT
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
50S ribosomal protein L18
BSR_Lac_UAPBR_inlet_at_38887_13
Ruminococcus albus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6753..7304)
DNA (552bp) protein (184aa)
50S ribosomal protein L6 n=1 Tax=Ruminococcus albus 8 RepID=E9SA48_RUMAL
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365, ECO:0000256|RuleBase:RU003870}; TaxID=246199 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus albus 8.;"
50S ribosomal protein L6
BSR_Lac_UAPBR_inlet_at_38887_14
[Clostridium] cellulosi, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(7323..7721)
DNA (399bp) protein (133aa)
30S ribosomal protein S8 n=1 Tax=Ethanoligenens harbinense (strain DSM 18485 / JCM 12961 / CGMCC 1.5033 / YUAN-3) RepID=E6U8H5_ETHHY
30S ribosomal protein S8
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302}; TaxID=29343 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] cellulosi.;"
BSR_Lac_UAPBR_inlet_at_38887_15
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

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comp(7753..7938)
DNA (186bp) protein (62aa)
30S ribosomal protein S14 type Z n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HBN4_9FIRM
30S ribosomal protein S14 type Z {ECO:0000256|HAMAP-Rule:MF_01364}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
Ribosomal protein S14
BSR_Lac_UAPBR_inlet_at_38887_16
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7952..8494)
DNA (543bp) protein (181aa)
50S ribosomal protein L5 n=2 Tax=Clostridium RepID=A7VR41_9CLOT
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333, ECO:0000256|RuleBase:RU003931}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
rplE; 50S ribosomal protein L5
BSR_Lac_UAPBR_inlet_at_38887_17
[Clostridium] cellulosi, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(8515..8835)
DNA (321bp) protein (107aa)
50S ribosomal protein L24 n=1 Tax=Ethanoligenens harbinense (strain DSM 18485 / JCM 12961 / CGMCC 1.5033 / YUAN-3) RepID=E6U831_ETHHY
50S ribosomal protein L24
50S ribosomal protein L24 {ECO:0000256|HAMAP-Rule:MF_01326}; TaxID=29343 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] cellulosi.;"
BSR_Lac_UAPBR_inlet_at_38887_18
Ruminococcus sp. CAG:379, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(8851..9219)
DNA (369bp) protein (123aa)
50S ribosomal protein L14 n=1 Tax=Ruminococcus sp. CAG:379 RepID=R7AZZ3_9FIRM
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367, ECO:0000256|RuleBase:RU003950}; TaxID=1262956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:379.;"
rplN; ribosomal protein L14
BSR_Lac_UAPBR_inlet_at_38887_19
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9447..9704)
DNA (258bp) protein (86aa)
30S ribosomal protein S17 n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VSH1_9CLOT
30S ribosomal protein S17 {ECO:0000256|HAMAP-Rule:MF_01345, ECO:0000256|RuleBase:RU003873}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
30S ribosomal protein S17
BSR_Lac_UAPBR_inlet_at_38887_20
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9732..9932)
DNA (201bp) protein (67aa)
50S ribosomal protein L29 n=1 Tax=Clostridium sp. MSTE9 RepID=J0MWW0_9CLOT
50S ribosomal protein L29 {ECO:0000256|HAMAP-Rule:MF_00374}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
50S ribosomal protein L29
BSR_Lac_UAPBR_inlet_at_38887_21
BJP_IG2069_Clostridiales_48_15, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(9929..10366)
DNA (438bp) protein (146aa)
50S ribosomal protein L16 n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5S656_9FIRM
rplP; 50S ribosomal protein L16
Tax=BJP_IG2069_Clostridiales_48_15
BSR_Lac_UAPBR_inlet_at_38887_22
Ethanoligenens harbinense, Ethanoligenens, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(10366..11034)
DNA (669bp) protein (223aa)
30S ribosomal protein S3 n=1 Tax=Ethanoligenens harbinense (strain DSM 18485 / JCM 12961 / CGMCC 1.5033 / YUAN-3) RepID=E6U826_ETHHY
30S ribosomal protein S3
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; TaxID=663278 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ethanoligenens.;" source="Ethanoligenens harbinense (strain DSM 18485 / JCM 12961 / CGMCC 1.5033; / YUAN-3).;"
BSR_Lac_UAPBR_inlet_at_38887_23
Clostridium sp. ATCC 29733, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11056..11394)
DNA (339bp) protein (113aa)
50S ribosomal protein L22 n=1 Tax=Clostridium sp. (strain ATCC 29733 / VPI C48-50) RepID=U2D6H2_CLOS4
50S ribosomal protein L22 {ECO:0000256|HAMAP-Rule:MF_01331, ECO:0000256|RuleBase:RU004008}; TaxID=1507 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. (strain ATCC 29733 / VPI C48-50).;"
LSU ribosomal protein L22P
BSR_Lac_UAPBR_inlet_at_38887_24
Ruminococcus sp. CAG:330, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(11419..11697)
DNA (279bp) protein (93aa)
30S ribosomal protein S19 n=2 Tax=Ruminococcus RepID=R7FCQ0_9FIRM
30S ribosomal protein S19 {ECO:0000256|HAMAP-Rule:MF_00531}; TaxID=1262954 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:330.;"
SSU ribosomal protein S19P
BSR_Lac_UAPBR_inlet_at_38887_25
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(11725..12558)
DNA (834bp) protein (278aa)
50S ribosomal protein L2 n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VTX7_9CLOT
50S ribosomal protein L2 {ECO:0000256|HAMAP-Rule:MF_01320}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
50S ribosomal protein L2
BSR_Lac_UAPBR_inlet_at_38887_26
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12580..12876)
DNA (297bp) protein (99aa)
50S ribosomal protein L23 n=5 Tax=Finegoldia magna RepID=RL23_FINM2
50S ribosomal protein L23
50S ribosomal protein L23 {ECO:0000256|HAMAP-Rule:MF_01369}; TaxID=525282 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Finegoldia.;" source="Finegoldia magna ATCC 53516.;"
BSR_Lac_UAPBR_inlet_at_38887_27
[Clostridium] cellulosi, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12873..13499)
DNA (627bp) protein (209aa)
50S ribosomal protein L4 n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7KUE1_9FIRM
rplD; 50S ribosomal protein L4
50S ribosomal protein L4 {ECO:0000256|HAMAP-Rule:MF_01328}; TaxID=29343 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] cellulosi.;"
BSR_Lac_UAPBR_inlet_at_38887_28
BJP_IG2069_Clostridiales_48_15, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(13526..14128)
DNA (603bp) protein (201aa)
50S ribosomal protein L3 n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5B1J5_9FIRM
rplC; 50S ribosomal protein L3
Tax=BJP_IG2069_Clostridiales_48_15
BSR_Lac_UAPBR_inlet_at_38887_29
[Clostridium] cellulosi, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(14277..14588)
DNA (312bp) protein (104aa)
30S ribosomal protein S10 n=1 Tax=Ethanoligenens harbinense (strain DSM 18485 / JCM 12961 / CGMCC 1.5033 / YUAN-3) RepID=E6U819_ETHHY
hypothetical protein
30S ribosomal protein S10 {ECO:0000256|HAMAP-Rule:MF_00508}; TaxID=29343 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] cellulosi.;"
BSR_Lac_UAPBR_inlet_at_38887_30
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15105..15806)
DNA (702bp) protein (234aa)
Uncharacterized protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VS29_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOQ35333.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
membrane spanning protein
Displaying items 1-30 of 34 in total

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