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BSR_Lac_UAPBR_inlet_at_48277

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BSR_Lac_UAPBR_inlet_at_48277_1
Sphaerochaeta coccoides, Sphaerochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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3..476
DNA (474bp) protein (158aa)
Putative phosphate transport regulator n=1 Tax=Spirochaeta coccoides (strain ATCC BAA-1237 / DSM 17374 / SPN1) RepID=F4GJX6_SPICD
phosphate transport regulator
Putative phosphate transport regulator {ECO:0000313|EMBL:AEC01401.1}; TaxID=760011 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Sphaerochaeta.;" source="Sphaerochaeta coccoides (strain ATCC BAA-1237 / DSM 17374 / SPN1); (Spirochaeta coccoides).;"
BSR_Lac_UAPBR_inlet_at_48277_2
GWF2_Clostridiales_36_10_curated, Clostridiales, Bacteria

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comp(666..1082)
DNA (417bp) protein (139aa)
hypothetical protein
Putative uncharacterized protein id=3445902 bin=GWF2_Clostridiales_36_10 species=Bacillus megaterium genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWF2_Clostridiales_36_10 organism_group=Firmicute
Tax=GWF2_Clostridiales_36_10_curated
BSR_Lac_UAPBR_inlet_at_48277_3
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1129..1608)
DNA (480bp) protein (160aa)
Ribosomal RNA large subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_00658}; EC=2.1.1.177 {ECO:0000256|HAMAP-Rule:MF_00658};; 23S rRNA (pseudouridine1915-N3)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; 23S rRNA m3Psi1915 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; rRNA (pseudouridine-N3-)-methyltransferase RlmH {ECO:0000256|HAMAP-Rule:MF_00658}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
Ribosomal RNA large subunit methyltransferase H n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6HWI0_9FIRM
hypothetical protein
BSR_Lac_UAPBR_inlet_at_48277_4
[Clostridium] cellulosi, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1613..2392)
DNA (780bp) protein (260aa)
Putative metal dependent hydrolase n=1 Tax=Ethanoligenens harbinense (strain DSM 18485 / JCM 12961 / CGMCC 1.5033 / YUAN-3) RepID=E6U2I9_ETHHY
putative metal dependent hydrolase
Putative metal dependent hydrolase {ECO:0000313|EMBL:CDZ24667.1}; TaxID=29343 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] cellulosi.;"
BSR_Lac_UAPBR_inlet_at_48277_5
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2465..3766)
DNA (1302bp) protein (434aa)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344}; EC=2.5.1.7 {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344};; Enoylpyruvate transferase {ECO:0000256|HAMAP-Rule:MF_00111}; UDP-N-acetylglucosamine enolpyruvyl transferase {ECO:0000256|HAMAP-Rule:MF_00111}; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpentosum DSM 5476.;"
murA3; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 3 (EC:2.5.1.7)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0ECG4_9CLOT
BSR_Lac_UAPBR_inlet_at_48277_6
unknown

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comp(4085..4933)
DNA (849bp) protein (283aa)

This feature has no annotations

BSR_Lac_UAPBR_inlet_at_48277_7
unknown

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comp(4930..6375)
DNA (1446bp) protein (482aa)

This feature has no annotations

BSR_Lac_UAPBR_inlet_at_48277_8
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6372..8162)
DNA (1791bp) protein (597aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
two-component histidine kinase (EC:2.7.13.3)
Uncharacterized protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W3S9_9CLOT
BSR_Lac_UAPBR_inlet_at_48277_9
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

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comp(8251..8949)
DNA (699bp) protein (233aa)
Response regulator receiver domain protein n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6MR90_9FIRM
Response regulator receiver domain protein {ECO:0000313|EMBL:CDB88357.1}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
response regulator with CheY-like receiver domain and winged-helix DNA-binding domain
BSR_Lac_UAPBR_inlet_at_48277_10
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9228..11000)
DNA (1773bp) protein (591aa)
Peptidase, M23 family n=2 Tax=Oscillibacter RepID=U2RNA9_9FIRM
Peptidase, M23 family {ECO:0000313|EMBL:ERK64548.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
putative metalloendopeptidase
BSR_Lac_UAPBR_inlet_at_48277_11
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11477..12577)
DNA (1101bp) protein (367aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. D5 RepID=F0YVY1_9CLOT
Putative uncharacterized protein {ECO:0000313|EMBL:EGB93819.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
hypothetical protein
BSR_Lac_UAPBR_inlet_at_48277_12
[Clostridium] clariflavum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12660..13733)
DNA (1074bp) protein (358aa)
Branched-chain-amino-acid aminotransferase {ECO:0000256|RuleBase:RU004517}; EC=2.6.1.42 {ECO:0000256|RuleBase:RU004517};; TaxID=720554 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45).;"
Branched-chain-amino-acid aminotransferase n=1 Tax=Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45) RepID=G8M0G0_CLOCD
branched-chain amino acid aminotransferase, group II
BSR_Lac_UAPBR_inlet_at_48277_13
Coprobacillus sp. CAG:698, Tenericutes, Bacteria

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comp(13816..14211)
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:698 RepID=R5FR14_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY07348.1}; TaxID=1262856 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:698.;"
membrane protein
BSR_Lac_UAPBR_inlet_at_48277_14
[Clostridium] cellulosi, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14225..15613)
DNA (1389bp) protein (463aa)
MATE efflux family protein n=1 Tax=Clostridium sp. (strain ATCC 29733 / VPI C48-50) RepID=U2DSV2_CLOS4
MATE efflux family protein
MATE efflux family protein {ECO:0000313|EMBL:CDZ24040.1}; TaxID=29343 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] cellulosi.;"
BSR_Lac_UAPBR_inlet_at_48277_15
unknown

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comp(15629..16768)
DNA (1140bp) protein (380aa)

This feature has no annotations

BSR_Lac_UAPBR_inlet_at_48277_16
GWC2_Spirochaetes_52_13_curated, Spirochaetes, Bacteria

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17003..17686
DNA (684bp) protein (228aa)
beta-galactosidase (EC:3.2.1.21)
Beta-galactosidase id=4340983 bin=GWC2_Spirochaete_52_13 species=Sphaerochaeta globosa genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
Tax=GWC2_Spirochaetes_52_13_curated
Displaying 16 items

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