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BSR_Lac_UAPBR_inlet_at_10412

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BSR_Lac_UAPBR_inlet_at_10412_1
Fervidicella metallireducens, Fervidicella, Clostridiales, Clostridia, Firmicutes, Bacteria

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1..1236
DNA (1236bp) protein (412aa)
Uncharacterized protein n=1 Tax=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) RepID=B8D2D2_HALOH
Uncharacterized protein {ECO:0000313|EMBL:EYE89727.1}; TaxID=1403537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Fervidicella.;" source="Fervidicella metallireducens AeB.;"
hypothetical protein
BSR_Lac_UAPBR_inlet_at_10412_2
Opitutaceae bacterium TAV1, Opitutales, Opitutae, Verrucomicrobia, Bacteria

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comp(1289..2191)
DNA (903bp) protein (301aa)
Transcriptional regulator id=3889877 bin=GWC2_Clostridiales_40_7 species=unknown genus=Paenibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Clostridiales_40_7 organism_group=Firmicute
Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain {ECO:0000313|EMBL:EIQ01592.1}; TaxID=278956 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV1.;"
transcriptional regulator
BSR_Lac_UAPBR_inlet_at_10412_3
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2234..2593)
DNA (360bp) protein (120aa)
membrane protein n=1 Tax=Blautia producta RepID=UPI00036157D7
Inner membrane protein YccF {ECO:0000313|EMBL:KJJ71203.1}; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
hypothetical protein
BSR_Lac_UAPBR_inlet_at_10412_4
Lachnospiraceae bacterium 1_4_56FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2627..2980)
DNA (354bp) protein (118aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 1_4_56FAA RepID=F7JPW8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN36276.1}; TaxID=658655 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 1_4_56FAA.;"
hypothetical protein
BSR_Lac_UAPBR_inlet_at_10412_5
Lachnoclostridium phytofermentans, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3002..3283)
DNA (282bp) protein (94aa)
Putative uncharacterized protein n=1 Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=A9KQK6_CLOPH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABX41919.1}; TaxID=357809 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg); (Lachnoclostridium phytofermentans).;"
BSR_Lac_UAPBR_inlet_at_10412_6
GWC2_Clostridiales_40_7_curated, Clostridiales, Bacteria

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3527..4657
DNA (1131bp) protein (377aa)
Putative uncharacterized protein id=4700060 bin=GWC2_Clostridiales_40_7 species=Treponema azotonutricium genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Clostridiales_40_7 organism_group=Firmicute
hypothetical protein
Tax=GWC2_Clostridiales_40_7_curated
BSR_Lac_UAPBR_inlet_at_10412_7
[Clostridium] stercorarium, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4674..7679
DNA (3006bp) protein (1002aa)
lacZ2; beta-galactosidase LacZ (EC:3.2.1.23)
Beta-galactosidase {ECO:0000256|RuleBase:RU361154, ECO:0000256|SAAS:SAAS00046613}; EC=3.2.1.23 {ECO:0000256|RuleBase:RU361154, ECO:0000256|SAAS:SAAS00046613};; Lactase {ECO:0000256|RuleBase:RU361154}; TaxID=1121335 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM; 8532 / NCIMB 11754).;"
Beta-galactosidase n=1 Tax=Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM 8532 / NCIMB 11754) RepID=L7VLR6_CLOSH
BSR_Lac_UAPBR_inlet_at_10412_8
Mahella australiensis, Mahella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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7975..9003
DNA (1029bp) protein (343aa)
Carbohydrate ABC transporter membrane protein 1, CUT1 family n=1 Tax=Mahella australiensis (strain DSM 15567 / CIP 107919 / 50-1 BON) RepID=F3ZWT2_MAHA5
CUT1 family carbohydrate ABC transporter membrane protein 1
Carbohydrate ABC transporter membrane protein 1, CUT1 family {ECO:0000313|EMBL:AEE96525.1}; TaxID=697281 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family IV. Incertae Sedis; Mahella.;" source="Mahella australiensis (strain DSM 15567 / CIP 107919 / 50-1 BON).;"
BSR_Lac_UAPBR_inlet_at_10412_9
GWC1_Treponema_61_84_curated, Spirochaetes, Bacteria

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9092..9916
DNA (825bp) protein (275aa)
ABC transporter periplasmic subunit-2 n=1 Tax=Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM 8532 / NCIMB 11754) RepID=L7VMR5_CLOSH
ABC transporter periplasmic subunit-2
Tax=GWC1_Treponema_61_84_curated
BSR_Lac_UAPBR_inlet_at_10412_10
Paenibacillus borealis, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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10026..11627
DNA (1602bp) protein (534aa)
ABC-type sugar transport system periplasmic component-like protein n=1 Tax=Paenibacillus sp. (strain JDR-2) RepID=C6D6I6_PAESJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIQ60122.1}; TaxID=160799 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus borealis.;"
BSR_Lac_UAPBR_inlet_at_10412_11
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11776..13335
DNA (1560bp) protein (520aa)
Two-component response regulator n=1 Tax=Clostridium hathewayi CAG:224 RepID=R5T6I1_9CLOT
Two-component response regulator {ECO:0000313|EMBL:CCZ61490.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
yesN10; hypothetical protein
BSR_Lac_UAPBR_inlet_at_10412_12
Paenibacillus sp. VKM B-2647, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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13335..16127
DNA (2793bp) protein (931aa)
Uncharacterized protein id=3945268 bin=GWC2_Clostridiales_40_7 species=Bacillus bataviensis genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Clostridiales_40_7 organism_group=Firmicute
Uncharacterized protein {ECO:0000313|EMBL:KIL41970.1}; TaxID=1590651 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. VKM B-2647.;"
histidine kinase
BSR_Lac_UAPBR_inlet_at_10412_13
Gimesia maris, Gimesia, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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16244..17392
DNA (1149bp) protein (383aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI000370D3D6
Uncharacterized protein {ECO:0000313|EMBL:EDL60850.1}; TaxID=344747 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Gimesia.;" source="Gimesia maris DSM 8797.;"
BSR_Lac_UAPBR_inlet_at_10412_14
unknown

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17658..18290
DNA (633bp) protein (211aa)

This feature has no annotations

BSR_Lac_UAPBR_inlet_at_10412_15

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18431..19102
DNA (672bp) protein (224aa)
Oxidoreductase domain protein id=4774846 bin=GWC2_Planctomycetes_45_44 species=Desulfocapsa sulfexigens genus=Desulfocapsa taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Planctomycetes_45_44 organism_group=Planctomycetes organism_desc=Novel; good
Oxidoreductase domain protein {ECO:0000313|EMBL:KKT04473.1}; TaxID=1618827 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_43_17.;"
putative dehydrogenase
Displaying 15 items

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