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BSR_Lac_UAPBR_inlet_at_25013

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Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BSR_Lac_UAPBR_inlet_at_25013_1
Moorella glycerini, Moorella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

2..907
DNA (906bp) protein (302aa)
Transcriptional regulator, AraC family n=1 Tax=Paenibacillus lactis 154 RepID=G4HJA4_9BACL
Genome assembly strain_NMP_1 {ECO:0000313|EMBL:CEP69162.1}; TaxID=55779 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Moorella group; Moorella.;" source="Moorella glycerini.;"
two component AraC family transcriptional regulator
BSR_Lac_UAPBR_inlet_at_25013_2
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1091..2683
DNA (1593bp) protein (531aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KKA3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN30201.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
ABC transporter substrate-binding protein
BSR_Lac_UAPBR_inlet_at_25013_3
Paenibacillus sp. HGF5, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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2712..3659
DNA (948bp) protein (316aa)
ABC transporter, permease protein n=1 Tax=Paenibacillus sp. HGF5 RepID=F3M8M4_9BACL
ABC transporter, permease protein {ECO:0000313|EMBL:EGG36272.1}; TaxID=908341 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. HGF5.;"
CUT1 family carbohydrate ABC transporter membrane protein 1
BSR_Lac_UAPBR_inlet_at_25013_4
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3749..4633
DNA (885bp) protein (295aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KKA1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN30199.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
sugar ABC transporter permease
BSR_Lac_UAPBR_inlet_at_25013_5
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

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4732..5886
DNA (1155bp) protein (385aa)
Putative uncharacterized protein id=3945269 bin=GWC2_Clostridiales_40_7 species=Lachnospiraceae bacterium 3_1_57FAA_CT1 genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Clostridiales_40_7 organism_group=Firmicute
Uncharacterized protein {ECO:0000313|EMBL:EGN42351.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
glycosyl hydrolase family protein
BSR_Lac_UAPBR_inlet_at_25013_6
Anaerotruncus sp. CAG:390, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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5982..7067
DNA (1086bp) protein (362aa)
Uncharacterized protein n=1 Tax=Anaerotruncus sp. CAG:390 RepID=R7ESR3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE05253.1}; TaxID=1262703 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus; environmental samples.;" source="Anaerotruncus sp. CAG:390.;"
hypothetical protein
BSR_Lac_UAPBR_inlet_at_25013_7
unknown

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7326..13970
DNA (6645bp) protein (2215aa)

This feature has no annotations

BSR_Lac_UAPBR_inlet_at_25013_8
Paenibacillus sp. VKM B-2647, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(14118..15023)
DNA (906bp) protein (302aa)
AraC-type DNA-binding domain-containing proteins n=1 Tax=Firmicutes bacterium CAG:272 RepID=R6TN88_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KIL40543.1}; TaxID=1590651 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. VKM B-2647.;"
transcriptional regulator, AraC family
BSR_Lac_UAPBR_inlet_at_25013_9
CG_Arma_01, Armatimonadetes, Bacteria

Not on your lists

15478..20382
DNA (4905bp) protein (1635aa)
Uncharacterized protein n=1 Tax=Opitutaceae bacterium TAV1 RepID=I6ASL2_9BACT
hypothetical protein
Tax=CG_Arma_01
BSR_Lac_UAPBR_inlet_at_25013_10
[Clostridium] clariflavum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(20548..22701)
DNA (2154bp) protein (718aa)
RNAse R (EC:3.1.-.-)
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=720554 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45).;"
Ribonuclease R n=1 Tax=Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45) RepID=G8LYV6_CLOCD
BSR_Lac_UAPBR_inlet_at_25013_11
[Clostridium] stercorarium, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(22891..23136)
DNA (246bp) protein (82aa)
Protein translocase, SecG subunit n=1 Tax=Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM 8532 / NCIMB 11754) RepID=L7VTV4_CLOSH
protein translocase, SecG subunit
Protein translocase, SecG subunit {ECO:0000313|EMBL:AGC69013.1}; TaxID=1121335 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM; 8532 / NCIMB 11754).;"
BSR_Lac_UAPBR_inlet_at_25013_12
[Clostridium] cellulosi, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(23206..25734)
DNA (2529bp) protein (843aa)
DNA gyrase subunit A {ECO:0000256|HAMAP-Rule:MF_01897}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01897};; TaxID=29343 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] cellulosi.;"
gyrA; DNA gyrase subunit A (EC:5.99.1.3)
DNA gyrase subunit A n=1 Tax=Clostridium leptum CAG:27 RepID=R6NA01_9CLOT
BSR_Lac_UAPBR_inlet_at_25013_13
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25794..27710)
DNA (1917bp) protein (639aa)
DNA gyrase subunit B {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363};; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpentosum DSM 5476.;"
gyrB; DNA gyrase subunit B (EC:5.99.1.3)
DNA gyrase subunit B n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EA11_9CLOT
BSR_Lac_UAPBR_inlet_at_25013_14
Firmicutes bacterium CAG:94, Firmicutes, Bacteria

Not on your lists

comp(27742..28011)
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:94 RepID=R6YBC4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD28514.1}; TaxID=1262989 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:94.;"
hypothetical protein
BSR_Lac_UAPBR_inlet_at_25013_15
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28043..29146)
DNA (1104bp) protein (368aa)
DNA replication and repair protein RecF n=1 Tax=Clostridium leptum CAG:27 RepID=R6MZI6_9CLOT
DNA replication and repair protein RecF {ECO:0000256|HAMAP-Rule:MF_00365, ECO:0000256|RuleBase:RU000578}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
DNA replication and repair protein RecF
BSR_Lac_UAPBR_inlet_at_25013_16
Ruminococcus flavefaciens, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29147..29368)
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7KNN2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EWM53096.1}; TaxID=1341157 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus flavefaciens 007c.;"
hypothetical protein
BSR_Lac_UAPBR_inlet_at_25013_17
[Clostridium] cellulosi, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29358..30473)
DNA (1116bp) protein (372aa)
DNA polymerase III subunit beta (EC:2.7.7.7)
DNA polymerase III subunit beta {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018186}; EC=2.7.7.7 {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018259};; TaxID=29343 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] cellulosi.;"
DNA polymerase III, beta subunit n=2 Tax=Clostridium RepID=A7VRS4_9CLOT
BSR_Lac_UAPBR_inlet_at_25013_18
[Clostridium] cellulosi, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30806..32122)
DNA (1317bp) protein (439aa)
Chromosomal replication initiator protein DnaA n=1 Tax=Ethanoligenens harbinense (strain DSM 18485 / JCM 12961 / CGMCC 1.5033 / YUAN-3) RepID=E6U5C5_ETHHY
dnaA; Chromosomal replication initiator protein DnaA
Chromosomal replication initiator protein DnaA {ECO:0000256|HAMAP-Rule:MF_00377, ECO:0000256|SAAS:SAAS00009621}; TaxID=29343 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] cellulosi.;"
BSR_Lac_UAPBR_inlet_at_25013_19
Ethanoligenens harbinense, Ethanoligenens, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32417..33394
DNA (978bp) protein (326aa)
Primosome, DnaD subunit n=1 Tax=Ethanoligenens harbinense (strain DSM 18485 / JCM 12961 / CGMCC 1.5033 / YUAN-3) RepID=E6U420_ETHHY
primosome subunit DnaD
Primosome, DnaD subunit {ECO:0000313|EMBL:ADU27700.1}; TaxID=663278 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ethanoligenens.;" source="Ethanoligenens harbinense (strain DSM 18485 / JCM 12961 / CGMCC 1.5033; / YUAN-3).;"
BSR_Lac_UAPBR_inlet_at_25013_20
[Clostridium] cellulosi, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33406..34410
DNA (1005bp) protein (335aa)
Uncharacterized protein n=1 Tax=Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 / Sjm18-20) RepID=G4L260_OSCVS
AAA ATPase
AAA ATPase {ECO:0000313|EMBL:CDZ23811.1}; TaxID=29343 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] cellulosi.;"
BSR_Lac_UAPBR_inlet_at_25013_21
Mahella australiensis, Mahella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

34452..35180
DNA (729bp) protein (243aa)
Trehalose utilization protein n=1 Tax=Mahella australiensis (strain DSM 15567 / CIP 107919 / 50-1 BON) RepID=F4A366_MAHA5
trehalose utilization protein
Trehalose utilization protein {ECO:0000313|EMBL:AEE96299.1}; TaxID=697281 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family IV. Incertae Sedis; Mahella.;" source="Mahella australiensis (strain DSM 15567 / CIP 107919 / 50-1 BON).;"
BSR_Lac_UAPBR_inlet_at_25013_22
unknown

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comp(35362..35505)
DNA (144bp) protein (48aa)

This feature has no annotations

BSR_Lac_UAPBR_inlet_at_25013_23
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35521..35853)
DNA (333bp) protein (111aa)
DNA-binding helix-turn-helix protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PAK3_9FIRM
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EDS11183.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
BSR_Lac_UAPBR_inlet_at_25013_24
unknown

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35974..36135
DNA (162bp) protein (54aa)

This feature has no annotations

BSR_Lac_UAPBR_inlet_at_25013_25
Clostridium sp. ATCC 29733, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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36172..36627
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Clostridium sp. (strain ATCC 29733 / VPI C48-50) RepID=U2F027_CLOS4
Uncharacterized protein {ECO:0000313|EMBL:ERJ00468.1}; TaxID=1507 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. (strain ATCC 29733 / VPI C48-50).;"
Protein of unknown function (DUF1273).
BSR_Lac_UAPBR_inlet_at_25013_26
Clostridium sp. ATCC 29733, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(36818..37945)
DNA (1128bp) protein (376aa)
Peptide chain release factor 2 n=1 Tax=Clostridium sp. (strain ATCC 29733 / VPI C48-50) RepID=U2CZK1_CLOS4
Peptide chain release factor 2 {ECO:0000256|HAMAP-Rule:MF_00094, ECO:0000256|SAAS:SAAS00020438}; Short=RF-2 {ECO:0000256|HAMAP-Rule:MF_00094};; TaxID=1507 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. (strain ATCC 29733 / VPI C48-50).;"
peptide chain release factor 2
Displaying 26 items

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