ggKbase home page

BSR_Lac_UAPBR_inlet_p_174247

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BSR_Lac_UAPBR_inlet_p_174247_1
Pseudomonas chlororaphis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..582
DNA (582bp) protein (194aa)
hypothetical protein n=1 Tax=Pseudomonas chlororaphis RepID=UPI00037B7186
autotransporter
Autotransporter {ECO:0000313|EMBL:AIC18535.1}; TaxID=587753 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas chlororaphis.;"
BSR_Lac_UAPBR_inlet_p_174247_2
RLO_Verrucomicrobia_64_8, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(802..2412)
DNA (1611bp) protein (537aa)
hypothetical protein n=1 Tax=Prochlorothrix hollandica RepID=UPI00034C92CB
isochorismate synthase
Tax=RIFCSPLOWO2_12_FULL_Verrucomicrobia_64_8_curated
BSR_Lac_UAPBR_inlet_p_174247_3
Opitutaceae bacterium TAV5, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists


comp(2546..4072)
DNA (1527bp) protein (509aa)
Methionyl-tRNA synthetase n=1 Tax=Opitutaceae bacterium TAV5 RepID=H1IPM4_9BACT
methionyl-tRNA synthetase
Methionyl-tRNA synthetase {ECO:0000313|EMBL:AHF92005.1}; TaxID=794903 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV5.;"
BSR_Lac_UAPBR_inlet_p_174247_4
Verrucomicrobia bacterium IMCC26134, Verrucomicrobia, Bacteria

Not on your lists

comp(4200..5504)
DNA (1305bp) protein (435aa)
Glycosyltransferase family 28 N-terminal domain n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JGT4_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AKC82830.1}; TaxID=1637999 species="Bacteria; Verrucomicrobia; unclassified Verrucomicrobia.;" source="Verrucomicrobia bacterium IMCC26134.;"
BSR_Lac_UAPBR_inlet_p_174247_5
Opitutaceae bacterium TAV5, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

5533..7047
DNA (1515bp) protein (505aa)
UDP-N-acetylmuramate--L-alanine ligase n=1 Tax=Opitutaceae bacterium TAV5 RepID=H1IPA0_9BACT
Mur ligase
Mur ligase {ECO:0000313|EMBL:AHF92319.1}; TaxID=794903 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV5.;"
BSR_Lac_UAPBR_inlet_p_174247_6
unknown

Not on your lists

7048..7359
DNA (312bp) protein (104aa)

This feature has no annotations

BSR_Lac_UAPBR_inlet_p_174247_7
RLO_Verrucomicrobia_64_8, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

7365..8141
DNA (777bp) protein (259aa)
Putative uncharacterized protein n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JDC3_9BACT
Tax=RIFCSPLOWO2_12_FULL_Verrucomicrobia_64_8_curated
BSR_Lac_UAPBR_inlet_p_174247_8
unknown

Not on your lists

8550..8687
DNA (138bp) protein (46aa)

This feature has no annotations

BSR_Lac_UAPBR_inlet_p_174247_9
Opitutaceae bacterium TAV5, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

8684..9547
DNA (864bp) protein (288aa)
Ribulose-phosphate 3-epimerase {ECO:0000256|PIRNR:PIRNR001461}; EC=5.1.3.1 {ECO:0000256|PIRNR:PIRNR001461};; TaxID=794903 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV5.;"
Ribulose-phosphate 3-epimerase n=1 Tax=Opitutaceae bacterium TAV5 RepID=H1IQ54_9BACT
ribulose-phosphate 3-epimerase
BSR_Lac_UAPBR_inlet_p_174247_10
Verrucomicrobia bacterium IMCC26134, Verrucomicrobia, Bacteria

Not on your lists

comp(9578..10246)
DNA (669bp) protein (223aa)
Nitroreductase n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZYI6_OPITP
nitroreductase
Nitroreductase {ECO:0000313|EMBL:AKC83559.1}; TaxID=1637999 species="Bacteria; Verrucomicrobia; unclassified Verrucomicrobia.;" source="Verrucomicrobia bacterium IMCC26134.;"
BSR_Lac_UAPBR_inlet_p_174247_11
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(10273..11343)
DNA (1071bp) protein (357aa)
NADH:flavin oxidoreductase/NADH oxidase n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZYI7_OPITP
NADH:flavin oxidoreductase
NADH:flavin oxidoreductase/NADH oxidase {ECO:0000313|EMBL:ACB77085.1}; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
BSR_Lac_UAPBR_inlet_p_174247_12
Opitutaceae bacterium TAV1, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(11583..12215)
DNA (633bp) protein (211aa)
Peptide methionine sulfoxide reductase MsrA {ECO:0000256|HAMAP-Rule:MF_01401}; Short=Protein-methionine-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401};; EC=1.8.4.11 {ECO:0000256|HAMAP-Rule:MF_01401};; Peptide-methionine (S)-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401}; Flags: Precursor;; TaxID=278956 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV1.;"
Peptide methionine sulfoxide reductase MsrA n=1 Tax=Opitutaceae bacterium TAV1 RepID=I6B3S7_9BACT
peptide methionine sulfoxide reductase
BSR_Lac_UAPBR_inlet_p_174247_trna_1
unknown

Not on your lists

12434..12506
DNA (73bp)
transferRNA Ala
BSR_Lac_UAPBR_inlet_p_174247_13
Opitutaceae bacterium TAV1, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(12695..13960)
DNA (1266bp) protein (422aa)
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; Flags: Precursor;; TaxID=278956 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV1.;"
Transcription termination factor Rho n=1 Tax=Opitutaceae bacterium TAV1 RepID=I6AZL5_9BACT
transcription termination factor Rho
BSR_Lac_UAPBR_inlet_p_174247_14
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

14101..16056
DNA (1956bp) protein (652aa)
Acetyl-coenzyme A synthetase {ECO:0000256|HAMAP-Rule:MF_01123}; Short=AcCoA synthetase {ECO:0000256|HAMAP-Rule:MF_01123};; Short=Acs {ECO:0000256|HAMAP-Rule:MF_01123};; EC=6.2.1.1 {ECO:0000256|HAMAP-Rule:MF_01123};; Acetate--CoA ligase {ECO:0000256|HAMAP-Rule:MF_01123}; Acyl-activating enzyme {ECO:0000256|HAMAP-Rule:MF_01123}; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
Acetyl-coenzyme A synthetase n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZX60_OPITP
acetate--CoA ligase
BSR_Lac_UAPBR_inlet_p_174247_15
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

16146..16835
DNA (690bp) protein (230aa)
HAD-superfamily hydrolase, subfamily IA, variant 3 n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CVP8_9BACT
HAD-superfamily hydrolase, subfamily IA, variant 3 {ECO:0000313|EMBL:EDY21490.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
phosphatase/phosphohexomutase HAD superfamily
BSR_Lac_UAPBR_inlet_p_174247_16
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

16939..18999
DNA (2061bp) protein (687aa)
UvrABC system protein B n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZWE7_OPITP
UvrABC system protein B {ECO:0000256|HAMAP-Rule:MF_00204, ECO:0000256|RuleBase:RU003587}; Short=Protein UvrB {ECO:0000256|HAMAP-Rule:MF_00204};; Excinuclease ABC subunit B {ECO:0000256|HAMAP-Rule:MF_00204}; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
excinuclease ABC subunit B
BSR_Lac_UAPBR_inlet_p_174247_17
Spirochaeta sp. JC230, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(19221..20156)
DNA (936bp) protein (312aa)
Uncharacterized protein n=3 Tax=Dehalobacter RepID=K4KU28_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGE70851.1}; TaxID=1480694 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Spirochaeta sp. JC230.;"
hypothetical protein
Displaying 18 items

View Taxonomy