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BSR_Lac_UAPBR_middle_p_1_76315

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Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BSR_Lac_UAPBR_middle_p_1_76315_1
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3..221)
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2DAH8_9FIRM
ABC-2 transporter family protein {ECO:0000313|EMBL:KIE44364.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
ABC-type multidrug transport system, permease component
BSR_Lac_UAPBR_middle_p_1_76315_2
Clostridium sp. BL8, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(224..1012)
DNA (789bp) protein (263aa)
hypothetical protein n=1 Tax=Clostridium tunisiense RepID=UPI0003608140
Uncharacterized protein {ECO:0000313|EMBL:EQB86221.1}; TaxID=1354301 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. BL8.;"
putative ABC transporter, permease protein
BSR_Lac_UAPBR_middle_p_1_76315_3
Clostridium sp. BL8, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(987..1991)
DNA (1005bp) protein (335aa)
hypothetical protein n=1 Tax=Clostridium tunisiense RepID=UPI0002DD8DA9
Uncharacterized protein {ECO:0000313|EMBL:EQB86220.1}; TaxID=1354301 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. BL8.;"
ABC transporter
BSR_Lac_UAPBR_middle_p_1_76315_4
Clostridium acetobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2339..2824
DNA (486bp) protein (162aa)
Acetyltransferase (Ribosomal protein N-acetylase subfamily) n=3 Tax=Clostridium acetobutylicum RepID=F0KA49_CLOAE
yjdG; acetyltransferase
Acetyltransferase (Ribosomal protein N-acetylase subfamily) {ECO:0000313|EMBL:AAK81353.1}; TaxID=272562 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 / LMG; 5710 / VKM B-1787).;"
BSR_Lac_UAPBR_middle_p_1_76315_5
Clostridium tyrobutyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2836..3168
DNA (333bp) protein (111aa)
methylated-DNA--protein-cysteine methyltransferase n=1 Tax=Clostridium tyrobutyricum RepID=UPI00037C7E79
Methylated-DNA--protein-cysteine methyltransferase {ECO:0000313|EMBL:CDL92729.1}; TaxID=1408889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium tyrobutyricum DIVETGP.;"
methyltransferase
BSR_Lac_UAPBR_middle_p_1_76315_6
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3218..5233)
DNA (2016bp) protein (672aa)
Urocanate hydratase {ECO:0000256|HAMAP-Rule:MF_00577, ECO:0000256|SAAS:SAAS00011632}; Short=Urocanase {ECO:0000256|HAMAP-Rule:MF_00577};; EC=4.2.1.49 {ECO:0000256|HAMAP-Rule:MF_00577, ECO:0000256|SAAS:SAAS00011632};; Imidazolonepropionate hydrolase {ECO:0000256|HAMAP-Rule:MF_00577}; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaerobacter.;" source="Caloranaerobacter azorensis H53214.;"
urocanate hydratase (EC:4.2.1.49)
Urocanate hydratase n=1 Tax=Tepidanaerobacter acetatoxydans (strain DSM 21804 / JCM 16047 / Re1) RepID=F4LWY1_TEPAE
BSR_Lac_UAPBR_middle_p_1_76315_7
Alkaliphilus oremlandii, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5248..6777)
DNA (1530bp) protein (510aa)
histidine ammonia-lyase (EC:4.3.1.3)
Histidine ammonia-lyase {ECO:0000255|HAMAP-Rule:MF_00229}; Short=Histidase {ECO:0000255|HAMAP-Rule:MF_00229};; EC=4.3.1.3 {ECO:0000255|HAMAP-Rule:MF_00229};; TaxID=350688 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus oremlandii (strain OhILAs) (Clostridium oremlandii; (strain OhILAs)).;"
Histidine ammonia-lyase n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=HUTH_ALKOO
BSR_Lac_UAPBR_middle_p_1_76315_8
Fervidicella metallireducens, Fervidicella, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6794..8473)
DNA (1680bp) protein (560aa)
Formate--tetrahydrofolate ligase {ECO:0000256|HAMAP-Rule:MF_01543}; EC=6.3.4.3 {ECO:0000256|HAMAP-Rule:MF_01543};; Formyltetrahydrofolate synthetase {ECO:0000256|HAMAP-Rule:MF_01543}; TaxID=1403537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Fervidicella.;" source="Fervidicella metallireducens AeB.;"
formate--tetrahydrofolate ligase (EC:6.3.4.3)
Formate-tetrahydrofolate ligase n=1 Tax=Eubacteriaceae bacterium CM2 RepID=V9HP70_9FIRM
BSR_Lac_UAPBR_middle_p_1_76315_9
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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8644..9465
DNA (822bp) protein (274aa)
Predicted hydrolase n=2 Tax=Clostridium RepID=D8GJN8_CLOLD
Carbon-nitrogen hydrolase {ECO:0000313|EMBL:KGG80236.1}; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaerobacter.;" source="Caloranaerobacter azorensis H53214.;"
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
BSR_Lac_UAPBR_middle_p_1_76315_10

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9462..10553
DNA (1092bp) protein (364aa)
Hypothetical membrane protein, acetyltransferase (GNAT) family n=1 Tax=uncultured archaeon RepID=D1JG08_9ARCH
Hypothetical membrane protein, acetyltransferase (GNAT) family {ECO:0000313|EMBL:CBH37466.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
acetyltransferase
BSR_Lac_UAPBR_middle_p_1_76315_11
Fretibacterium fastidiosum, Fretibacterium, Synergistales, Synergistia, Synergistetes, Bacteria

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comp(10595..10981)
DNA (387bp) protein (129aa)
Putative uncharacterized protein n=1 Tax=Fretibacterium fastidiosum RepID=D4M8V4_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL28299.1}; TaxID=651822 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Fretibacterium.;" source="Fretibacterium fastidiosum.;"
BSR_Lac_UAPBR_middle_p_1_76315_12
Thermanaerovibrio velox, Thermanaerovibrio, Synergistales, Synergistia, Synergistetes, Bacteria

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comp(11001..12131)
DNA (1131bp) protein (377aa)
Permease component of ribose/xylose/arabinose/galactoside ABC-type transporter n=1 Tax=Thermanaerovibrio velox DSM 12556 RepID=H0UR26_9BACT
Permease component of ribose/xylose/arabinose/galactoside ABC-type transporter {ECO:0000313|EMBL:EHM10863.1}; Flags: Precursor;; TaxID=926567 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Thermanaerovibrio.;" source="Thermanaerovibrio velox DSM 12556.;"
inner-membrane translocator
BSR_Lac_UAPBR_middle_p_1_76315_13
Thermanaerovibrio velox, Thermanaerovibrio, Synergistales, Synergistia, Synergistetes, Bacteria

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comp(12128..13171)
DNA (1044bp) protein (348aa)
Permease component of ribose/xylose/arabinose/galactoside ABC-type transporter n=1 Tax=Thermanaerovibrio velox DSM 12556 RepID=H0UR27_9BACT
Permease component of ribose/xylose/arabinose/galactoside ABC-type transporter {ECO:0000313|EMBL:EHM10864.1}; Flags: Precursor;; TaxID=926567 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Thermanaerovibrio.;" source="Thermanaerovibrio velox DSM 12556.;"
inner-membrane translocator
BSR_Lac_UAPBR_middle_p_1_76315_14
Thermanaerovibrio velox, Thermanaerovibrio, Synergistales, Synergistia, Synergistetes, Bacteria

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comp(13171..14781)
DNA (1611bp) protein (537aa)
ABC-type sugar transport system, ATPase component n=1 Tax=Thermanaerovibrio velox DSM 12556 RepID=H0UR28_9BACT
ABC-type sugar transport system, ATPase component {ECO:0000313|EMBL:EHM10865.1}; TaxID=926567 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Thermanaerovibrio.;" source="Thermanaerovibrio velox DSM 12556.;"
ABC transporter
BSR_Lac_UAPBR_middle_p_1_76315_15
Thermanaerovibrio acidaminovorans, Thermanaerovibrio, Synergistales, Synergistia, Synergistetes, Bacteria

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comp(14851..16029)
DNA (1179bp) protein (393aa)
Uncharacterized protein n=1 Tax=Thermanaerovibrio acidaminovorans (strain ATCC 49978 / DSM 6589 / Su883) RepID=D1B7V7_THEAS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACZ18360.1}; Flags: Precursor;; TaxID=525903 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Thermanaerovibrio.;" source="Thermanaerovibrio acidaminovorans (strain ATCC 49978 / DSM 6589 /; Su883) (Selenomonas acidaminovorans).;"
BSR_Lac_UAPBR_middle_p_1_76315_16
Marinitoga piezophila, Marinitoga, Petrotogales, Thermotogae, Thermotogae, Bacteria

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16334..16876
DNA (543bp) protein (181aa)
ADP-ribose pyrophosphatase n=1 Tax=Marinitoga piezophila (strain DSM 14283 / JCM 11233 / KA3) RepID=H2J2P8_MARPK
ADP-ribose pyrophosphatase
ADP-ribose pyrophosphatase {ECO:0000313|EMBL:AEX84492.1}; TaxID=443254 species="Bacteria; Thermotogae; Petrotogales; Petrotogaceae; Marinitoga.;" source="Marinitoga piezophila (strain DSM 14283 / JCM 11233 / KA3).;"
BSR_Lac_UAPBR_middle_p_1_76315_17
RBG_13_OP8X_37_8_curated, OP8X, Bacteria

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16928..18715
DNA (1788bp) protein (596aa)
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=uncultured organism RepID=M1PPZ0_9ZZZZ
PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein
Tax=RBG_13_OP8X_37_8_curated
BSR_Lac_UAPBR_middle_p_1_76315_18
Marinitoga piezophila, Marinitoga, Petrotogales, Thermotogae, Thermotogae, Bacteria

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18884..19336
DNA (453bp) protein (151aa)
Fe2+ transport system protein A n=1 Tax=Marinitoga piezophila (strain DSM 14283 / JCM 11233 / KA3) RepID=H2J3J8_MARPK
Fe2+ transport system protein A
Fe2+ transport system protein A {ECO:0000313|EMBL:AEX84642.1}; TaxID=443254 species="Bacteria; Thermotogae; Petrotogales; Petrotogaceae; Marinitoga.;" source="Marinitoga piezophila (strain DSM 14283 / JCM 11233 / KA3).;"
BSR_Lac_UAPBR_middle_p_1_76315_19
Marinitoga piezophila, Marinitoga, Petrotogales, Thermotogae, Thermotogae, Bacteria

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19349..21298
DNA (1950bp) protein (650aa)
Ferrous iron transporter FeoB n=1 Tax=Marinitoga piezophila (strain DSM 14283 / JCM 11233 / KA3) RepID=H2J3J6_MARPK
ferrous iron transporter FeoB
Ferrous iron transporter FeoB {ECO:0000313|EMBL:AEX84640.1}; Flags: Precursor;; TaxID=443254 species="Bacteria; Thermotogae; Petrotogales; Petrotogaceae; Marinitoga.;" source="Marinitoga piezophila (strain DSM 14283 / JCM 11233 / KA3).;"
BSR_Lac_UAPBR_middle_p_1_76315_20
Marinitoga piezophila, Marinitoga, Petrotogales, Thermotogae, Thermotogae, Bacteria

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21295..21651
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Marinitoga piezophila (strain DSM 14283 / JCM 11233 / KA3) RepID=H2J3J5_MARPK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEX84639.1}; Flags: Precursor;; TaxID=443254 species="Bacteria; Thermotogae; Petrotogales; Petrotogaceae; Marinitoga.;" source="Marinitoga piezophila (strain DSM 14283 / JCM 11233 / KA3).;"
BSR_Lac_UAPBR_middle_p_1_76315_trna_1
unknown

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21702..21774
DNA (73bp)
transferRNA Trp
BSR_Lac_UAPBR_middle_p_1_76315_21
Marinitoga piezophila, Marinitoga, Petrotogales, Thermotogae, Thermotogae, Bacteria

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22057..23205
DNA (1149bp) protein (383aa)
Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase n=1 Tax=Marinitoga piezophila (strain DSM 14283 / JCM 11233 / KA3) RepID=H2J5D1_MARPK
serine-pyruvate aminotransferase/archaeal aspartate aminotransferase
Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase {ECO:0000313|EMBL:AEX84989.1}; TaxID=443254 species="Bacteria; Thermotogae; Petrotogales; Petrotogaceae; Marinitoga.;" source="Marinitoga piezophila (strain DSM 14283 / JCM 11233 / KA3).;"
BSR_Lac_UAPBR_middle_p_1_76315_22
Marinitoga piezophila, Marinitoga, Petrotogales, Thermotogae, Thermotogae, Bacteria

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23207..24136
DNA (930bp) protein (310aa)
Phosphoglycerate dehydrogenase-like oxidoreductase n=1 Tax=Marinitoga piezophila (strain DSM 14283 / JCM 11233 / KA3) RepID=H2J5D2_MARPK
phosphoglycerate dehydrogenase-like oxidoreductase
Phosphoglycerate dehydrogenase-like oxidoreductase {ECO:0000313|EMBL:AEX84990.1}; TaxID=443254 species="Bacteria; Thermotogae; Petrotogales; Petrotogaceae; Marinitoga.;" source="Marinitoga piezophila (strain DSM 14283 / JCM 11233 / KA3).;"
BSR_Lac_UAPBR_middle_p_1_76315_23
Marinitoga piezophila, Marinitoga, Petrotogales, Thermotogae, Thermotogae, Bacteria

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24214..24396
DNA (183bp) protein (61aa)
Ferredoxin n=1 Tax=Marinitoga piezophila (strain DSM 14283 / JCM 11233 / KA3) RepID=H2J5K5_MARPK
ferredoxin
Ferredoxin {ECO:0000313|EMBL:AEX84991.1}; TaxID=443254 species="Bacteria; Thermotogae; Petrotogales; Petrotogaceae; Marinitoga.;" source="Marinitoga piezophila (strain DSM 14283 / JCM 11233 / KA3).;"
BSR_Lac_UAPBR_middle_p_1_76315_24
Defluviitoga tunisiensis, Defluviitoga, Petrotogales, Thermotogae, Thermotogae, Bacteria

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24567..25382
DNA (816bp) protein (272aa)
Site-determining protein n=1 Tax=Marinitoga piezophila (strain DSM 14283 / JCM 11233 / KA3) RepID=H2J5K6_MARPK
Site-determining protein {ECO:0000256|PIRNR:PIRNR003092}; TaxID=1006576 species="Bacteria; Thermotogae; Petrotogales; Petrotogaceae; Defluviitoga.;" source="Defluviitoga tunisiensis.;"
septum site-determining protein MinD
BSR_Lac_UAPBR_middle_p_1_76315_25
MPF_Petrotoga_mobilis_34_12, Thermotogales, Thermotogae, Thermotogae, Bacteria

Not on your lists

25379..25651
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Petrotoga mobilis (strain DSM 10674 / SJ95) RepID=A9BJ60_PETMO
hypothetical protein
Tax=MPF_Petrotoga_mobilis_34_12
BSR_Lac_UAPBR_middle_p_1_76315_26
Defluviitoga tunisiensis, Defluviitoga, Petrotogales, Thermotogae, Thermotogae, Bacteria

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comp(25666..26430)
DNA (765bp) protein (255aa)
Uncharacterized protein n=1 Tax=Petrotoga mobilis (strain DSM 10674 / SJ95) RepID=A9BHI7_PETMO
Uncharacterized protein {ECO:0000313|EMBL:CEP78182.1}; TaxID=1006576 species="Bacteria; Thermotogae; Petrotogales; Petrotogaceae; Defluviitoga.;" source="Defluviitoga tunisiensis.;"
hypothetical protein
BSR_Lac_UAPBR_middle_p_1_76315_27
Marinitoga piezophila, Marinitoga, Petrotogales, Thermotogae, Thermotogae, Bacteria

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26475..29246
DNA (2772bp) protein (924aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=443254 species="Bacteria; Thermotogae; Petrotogales; Petrotogaceae; Marinitoga.;" source="Marinitoga piezophila (strain DSM 14283 / JCM 11233 / KA3).;"
PAS domain S-box n=1 Tax=Marinitoga piezophila (strain DSM 14283 / JCM 11233 / KA3) RepID=H2J6A0_MARPK
PAS domain-containing protein
BSR_Lac_UAPBR_middle_p_1_76315_28
Marinitoga piezophila, Marinitoga, Petrotogales, Thermotogae, Thermotogae, Bacteria

Not on your lists

29279..29602
DNA (324bp) protein (108aa)
Response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains n=1 Tax=Marinitoga piezophila (strain DSM 14283 / JCM 11233 / KA3) RepID=H2J699_MARPK
response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains
Response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains {ECO:0000313|EMBL:AEX86247.1}; TaxID=443254 species="Bacteria; Thermotogae; Petrotogales; Petrotogaceae; Marinitoga.;" source="Marinitoga piezophila (strain DSM 14283 / JCM 11233 / KA3).;"
Displaying 29 items

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