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BSR_inoc_138611

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Displaying items 1-30 of 53 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BSR_inoc_138611_1
Thermovirga lienii, Thermovirga, Synergistales, Synergistia, Synergistetes, Bacteria

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comp(3..323)
DNA (321bp) protein (107aa)
Amino acid/amide ABC transporter membrane protein 2, HAAT family n=1 Tax=Thermovirga lienii (strain ATCC BAA-1197 / DSM 17291 / Cas60314) RepID=G7V677_THELD
amino acid ABC transporter
Amino acid/amide ABC transporter membrane protein 2, HAAT family {ECO:0000313|EMBL:AER67064.1}; TaxID=580340 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Thermovirga.;" source="Thermovirga lienii (strain ATCC BAA-1197 / DSM 17291 / Cas60314).;"
BSR_inoc_138611_2
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(507..1595)
DNA (1089bp) protein (363aa)
Acyl-CoA delta-9-desaturase, DesB n=40 Tax=Pseudomonas aeruginosa RepID=Q9HUS5_PSEAE
putative linoleoyl-CoA desaturase (delta(6)-desaturase)
Pseudomonas aeruginosa genome assembly PAE221 {ECO:0000313|EMBL:CEI79818.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa.;"
BSR_inoc_138611_3
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1616..2716)
DNA (1101bp) protein (367aa)
Ferredoxin n=50 Tax=Pseudomonas aeruginosa RepID=R9ZLY9_PSEAI
ferredoxin
Pseudomonas aeruginosa genome assembly PAE221 {ECO:0000313|EMBL:CEI79819.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa.;"
BSR_inoc_138611_4
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2875..3504
DNA (630bp) protein (210aa)
TetR family transcriptional regulator n=4 Tax=Pseudomonas aeruginosa RepID=U8Q917_PSEAI
Pseudomonas aeruginosa genome assembly PAE221 {ECO:0000313|EMBL:CEI79820.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa.;"
TetR family transcriptional regulator
BSR_inoc_138611_5
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3734..4237
DNA (504bp) protein (168aa)
Urease accessory protein ureE n=4 Tax=Pseudomonas aeruginosa RepID=U8Q998_PSEAI
Urease accessory protein UreE {ECO:0000256|HAMAP-Rule:MF_00822, ECO:0000256|SAAS:SAAS00072411}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa.;"
ureE; urease accessory protein UreE
BSR_inoc_138611_6
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4234..4905
DNA (672bp) protein (224aa)
Urease accessory protein ureF n=6 Tax=Pseudomonas aeruginosa RepID=U8M5F7_PSEAI
Urease accessory protein UreF
Urease accessory protein UreF {ECO:0000256|HAMAP-Rule:MF_01385}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa.;"
BSR_inoc_138611_7
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4916..5530
DNA (615bp) protein (205aa)
Urease accessory protein UreG n=127 Tax=Pseudomonas RepID=UREG_PSEA8
Urease accessory protein UreG
Urease accessory protein UreG {ECO:0000256|HAMAP-Rule:MF_01389}; TaxID=1402581 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa PS42.;"
BSR_inoc_138611_8
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5560..6132
DNA (573bp) protein (191aa)
Urease accessory protein n=52 Tax=Pseudomonas aeruginosa RepID=B7V1V7_PSEA8
ureJ; urease accessory protein
Uncharacterized protein {ECO:0000313|EMBL:CDH79958.1}; TaxID=1306165 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa MH27.;"
BSR_inoc_138611_9
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6149..7171)
DNA (1023bp) protein (341aa)
Transmembrane sensor n=4 Tax=Pseudomonas aeruginosa RepID=U8Q922_PSEAI
Pseudomonas aeruginosa genome assembly PAE221 {ECO:0000313|EMBL:CEI79825.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa.;"
transmembrane sensor
BSR_inoc_138611_10
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7164..7700)
DNA (537bp) protein (179aa)
RNA polymerase sigma factor n=46 Tax=Pseudomonas RepID=G4LGF1_PSEAI
RNA polymerase sigma factor
RNA polymerase sigma factor {ECO:0000313|EMBL:EZO97252.1}; TaxID=1418240 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa BWH054.;"
BSR_inoc_138611_11
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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7866..10835
DNA (2970bp) protein (990aa)
Uncharacterized protein n=6 Tax=Pseudomonas RepID=N2CRY6_9PSED
Pseudomonas aeruginosa genome assembly PAE221 {ECO:0000313|EMBL:CEI79827.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa.;"
putative extracellular heme-binding protein
BSR_inoc_138611_12
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10980..12233)
DNA (1254bp) protein (418aa)
Porin {ECO:0000313|EMBL:AKE72592.1}; Pseudomonas aeruginosa genome assembly PAE221 {ECO:0000313|EMBL:CEI79828.1}; Vanillate porin OpdK {ECO:0000313|EMBL:CKI20056.1}; EC=3.4.21.- {ECO:0000313|EMBL:CKI20056.1};; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa.;"
Histidine porin OpdK n=29 Tax=Pseudomonas aeruginosa RepID=G2KYM6_PSEAI
vanillate porin OpdK
BSR_inoc_138611_13
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12341..13810)
DNA (1470bp) protein (490aa)
Aldehyde dehydrogenase {ECO:0000313|EMBL:AKE72593.1}; Pseudomonas aeruginosa genome assembly PAE221 {ECO:0000313|EMBL:CEI79829.1}; Putative aldehyde dehydrogenase yfmT {ECO:0000313|EMBL:CEI12516.1}; EC=1.2.1.3 {ECO:0000313|EMBL:CEI12516.1};; Putative benzaldehyde dehydrogenase oxidoreductase protein {ECO:0000313|EMBL:BAR70357.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa.;"
Aldehyde dehydrogenase family protein n=64 Tax=Pseudomonas RepID=T2E110_PSEAI
putative aldehyde dehydrogenase
BSR_inoc_138611_14
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13833..15173)
DNA (1341bp) protein (447aa)
MFS family transporter n=6 Tax=Pseudomonas aeruginosa RepID=U8J3Y1_PSEAI
Pseudomonas aeruginosa genome assembly PAE221 {ECO:0000313|EMBL:CEI79830.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa.;"
benK; putative MFS transporter
BSR_inoc_138611_15
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15260..16846)
DNA (1587bp) protein (529aa)
mdlC; benzoylformate decarboxylase (EC:4.1.1.7)
Benzoylformate decarboxylase; Short=BFD;; Short=BFDC;; EC=4.1.1.7;; TaxID=208964 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG; 12228).;"
Benzoylformate decarboxylase n=47 Tax=Pseudomonas aeruginosa RepID=MDLC_PSEAE
BSR_inoc_138611_16
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16947..17843
DNA (897bp) protein (299aa)
Transcriptional regulator n=103 Tax=Pseudomonas RepID=M9S6R4_PSEAI
LysR family transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:ERV76106.1}; TaxID=1402545 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa BL04.;"
BSR_inoc_138611_17
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17858..19192)
DNA (1335bp) protein (445aa)
MFS transporter n=34 Tax=Pseudomonas aeruginosa RepID=V5T460_PSEAI
vanK; putative MFS transporter
MFS transporter {ECO:0000313|EMBL:CDH79967.1}; TaxID=1306165 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa MH27.;"
BSR_inoc_138611_18
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19571..20626
DNA (1056bp) protein (352aa)
Rieske (2Fe-2S) protein n=15 Tax=Pseudomonas aeruginosa RepID=R9ZKI7_PSEAI
Rieske (2Fe-2S) protein
Vanillate O-demethylase oxygenase subunit {ECO:0000313|EMBL:AHW73644.1}; TaxID=1457392 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa PA96.;"
BSR_inoc_138611_19
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20641..21594
DNA (954bp) protein (318aa)
Flavodoxin reductases (Ferredoxin-NADPH reductases) family 1 Vanillate O-demethylase oxidoreductase n=9 Tax=Pseudomonas aeruginosa RepID=U6AFW2_PSEAI
Vanillate O-demethylase oxidoreductase
Pseudomonas aeruginosa genome assembly PAE221 {ECO:0000313|EMBL:CEI79835.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa.;"
BSR_inoc_138611_20
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21591..22304)
DNA (714bp) protein (238aa)
Transcriptional regulator for ferulate or vanillate catabolism n=45 Tax=Pseudomonas RepID=U6AGG5_PSEAI
vanR; transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:ERV76110.1}; TaxID=1402545 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa BL04.;"
BSR_inoc_138611_21
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22368..23129)
DNA (762bp) protein (254aa)
Short-chain dehydrogenase n=120 Tax=Pseudomonas RepID=M9S6R9_PSEAI
oxidoreductase
Short-chain dehydrogenase {ECO:0000313|EMBL:AHW73647.1}; TaxID=1457392 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa PA96.;"
BSR_inoc_138611_22
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23487..24419)
DNA (933bp) protein (311aa)
Ornithine cyclodeaminase n=39 Tax=Pseudomonas aeruginosa RepID=G2KYN6_PSEAI
ornithine cyclodeaminase
Pseudomonas aeruginosa genome assembly PAE221 {ECO:0000313|EMBL:CEI79838.1}; Uncharacterized protein {ECO:0000313|EMBL:CEI12553.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa.;"
BSR_inoc_138611_23
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24490..25206)
DNA (717bp) protein (239aa)
ABC transporter ATP-binding protein n=129 Tax=Pseudomonas RepID=G4LGD7_PSEAI
Branched-chain amino acid transport ATP-binding protein LivF
Amino acid ABC transporter ATPase {ECO:0000313|EMBL:EQL43190.1}; TaxID=1350465 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa VRFPA03.;"
BSR_inoc_138611_24
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25203..26075)
DNA (873bp) protein (291aa)
ABC transporter ATP-binding protein n=132 Tax=Pseudomonas RepID=G4LGD6_PSEAI
ABC transporter family protein
Amino acid ABC transporter ATP-binding protein {ECO:0000313|EMBL:EVT88033.1}; TaxID=1441931 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa VRFPA09.;"
BSR_inoc_138611_25
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26072..27349)
DNA (1278bp) protein (426aa)
Branched chain amino acid ABC transporter permease n=65 Tax=Pseudomonas aeruginosa RepID=M9S9E2_PSEAI
branched-chain amino acid ABC transporter permease
Branched-chain amino acid ABC transporter permease {ECO:0000313|EMBL:ERV76115.1}; TaxID=1402545 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa BL04.;"
BSR_inoc_138611_26
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27360..28274)
DNA (915bp) protein (305aa)
Branched chain amino acid ABC transporter permease n=133 Tax=Pseudomonas RepID=M9S6S3_PSEAI
braD; putative permease of ABC branched chain amino acid transporter
Branched-chain amino acid transporter permease subunit LivH {ECO:0000313|EMBL:ETD53332.1}; TaxID=1431713 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa VRFPA07.;"
BSR_inoc_138611_27
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28509..29633)
DNA (1125bp) protein (375aa)
ABC transporter n=46 Tax=Pseudomonas RepID=R9ZNQ5_PSEAI
receptor ligand binding region family protein
Amino acid ABC transporter substrate-binding protein {ECO:0000313|EMBL:AKE72606.1}; Putative ABC transporter binding protein subunit {ECO:0000313|EMBL:CKI20325.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa.;"
BSR_inoc_138611_28
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30253..31191
DNA (939bp) protein (313aa)
Transcriptional regulator, LysR family n=32 Tax=Pseudomonas aeruginosa RepID=U6ADR2_PSEAI
LysR family transcriptional regulator
LysR family transcriptional regulator {ECO:0000313|EMBL:ETU87067.1}; TaxID=1402581 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa PS42.;"
BSR_inoc_138611_29
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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31248..32873
DNA (1626bp) protein (542aa)
Chemotaxis protein n=57 Tax=Pseudomonas RepID=R9ZM17_PSEAI
putative chemotaxis transducer
Methyl-accepting chemotaxis protein {ECO:0000313|EMBL:ETU87068.1}; TaxID=1402581 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa PS42.;"
BSR_inoc_138611_30
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32920..33615)
DNA (696bp) protein (232aa)
Uncharacterized protein n=93 Tax=Pseudomonas RepID=G4LGD0_PSEAI
Nudix-related transcriptional regulator NrtR
ADP-ribose pyrophosphatase {ECO:0000313|EMBL:CKI20367.1}; NUDIX hydrolase {ECO:0000313|EMBL:AKE72609.1}; Pseudomonas aeruginosa genome assembly PAE221 {ECO:0000313|EMBL:CEI79846.1}; Putative ADP-ribose pyrophosphatase {ECO:0000313|EMBL:CEI12593.1}; Transcriptional regulator NrtR {ECO:0000313|EMBL:BAR70375.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa.;"
Displaying items 1-30 of 53 in total

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