ggKbase home page

BSR_inoc_216555

Search features with annotation key words

Displaying items 31-60 of 76 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BSR_inoc_216555_31
BJP_IG2103_SUB10_Tenericutes_35_49, Mollicutes, Tenericutes, Bacteria

Not on your lists

comp(32665..33183)
DNA (519bp) protein (173aa)
RNA polymerase sigma-70 factor, ECF subfamily id=3239264 bin=GWF2_Firmicute_57_13 species=Acholeplasma laidlawii genus=Acholeplasma taxon_order=Acholeplasmatales taxon_class=Mollicutes phylum=Tenericutes tax=GWF2_Firmicute_57_13 organism_group=Firmicute
sigR; ECF RNA polymerase sigma factor SigR
Tax=BJP_IG2103_SUB10_Tenericutes_35_49
BSR_inoc_216555_32
Acholeplasma brassicae, Acholeplasma, Acholeplasmatales, Mollicutes, Tenericutes, Bacteria

Not on your lists

comp(33248..35128)
DNA (1881bp) protein (627aa)
Uncharacterized protein n=1 Tax=Acholeplasma brassicae RepID=U4KQ05_9MOLU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCV66485.1}; TaxID=61635 species="Bacteria; Tenericutes; Mollicutes; Acholeplasmatales; Acholeplasmataceae; Acholeplasma.;" source="Acholeplasma brassicae.;"
BSR_inoc_216555_33
Coprobacillus sp. CAG:698, Tenericutes, Bacteria

Not on your lists

comp(35228..35866)
DNA (639bp) protein (213aa)
Thiamine pyrophosphokinase n=1 Tax=Coprobacillus sp. CAG:698 RepID=R5G668_9FIRM
Thiamine pyrophosphokinase {ECO:0000313|EMBL:CCY07966.1}; TaxID=1262856 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:698.;"
thiamine pyrophosphokinase
BSR_inoc_216555_34
Coprobacillus sp. CAG:698, Tenericutes, Bacteria

Not on your lists

comp(35863..36504)
DNA (642bp) protein (214aa)
Ribulose-phosphate 3-epimerase {ECO:0000256|PIRNR:PIRNR001461}; EC=5.1.3.1 {ECO:0000256|PIRNR:PIRNR001461};; TaxID=1262856 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:698.;"
rpe; Ribulose-phosphate 3-epimerase (EC:5.1.3.1)
Ribulose-phosphate 3-epimerase n=1 Tax=Coprobacillus sp. CAG:698 RepID=R5FS75_9FIRM
BSR_inoc_216555_35
Coprobacillus sp. CAG:698, Tenericutes, Bacteria

Not on your lists

comp(36515..37345)
DNA (831bp) protein (277aa)
Putative ribosome biogenesis GTPase RsgA {ECO:0000256|HAMAP-Rule:MF_01820}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_01820};; TaxID=1262856 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:698.;"
Putative ribosome biogenesis GTPase RsgA n=1 Tax=Coprobacillus sp. CAG:698 RepID=R5FWA2_9FIRM
GTPase
BSR_inoc_216555_36
Coprobacillus sp. CAG:698, Tenericutes, Bacteria

Not on your lists

comp(37333..38379)
DNA (1047bp) protein (349aa)
Probable dual-specificity RNA methyltransferase RlmN {ECO:0000256|HAMAP-Rule:MF_01849}; EC=2.1.1.192 {ECO:0000256|HAMAP-Rule:MF_01849};; 23S rRNA (adenine(2503)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; 23S rRNA m2A2503 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; Ribosomal RNA large subunit methyltransferase N {ECO:0000256|HAMAP-Rule:MF_01849}; tRNA (adenine(37)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; tRNA m2A37 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; TaxID=1262856 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:698.;"
Probable dual-specificity RNA methyltransferase RlmN n=1 Tax=Coprobacillus sp. CAG:698 RepID=R5FSY5_9FIRM
yloN; ribosomal RNA large subunit methyltransferase N
BSR_inoc_216555_37
Coprobacillus sp. CAG:698, Tenericutes, Bacteria

Not on your lists

comp(38376..39638)
DNA (1263bp) protein (421aa)
Ribosomal RNA small subunit methyltransferase B {ECO:0000256|SAAS:SAAS00013752}; EC=2.1.1.- {ECO:0000256|SAAS:SAAS00276898};; TaxID=1262856 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:698.;"
Ribosomal RNA small subunit methyltransferase B n=1 Tax=Coprobacillus sp. CAG:698 RepID=R5G4Y0_9FIRM
16S rRNA methyltransferase B
BSR_inoc_216555_38
Coprobacillus sp. CAG:698, Tenericutes, Bacteria

Not on your lists

comp(39628..40434)
DNA (807bp) protein (269aa)
PHP domain protein n=1 Tax=Coprobacillus sp. CAG:698 RepID=R5G663_9FIRM
PHP domain protein {ECO:0000313|EMBL:CCY07961.1}; TaxID=1262856 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:698.;"
trpH; protein TrpH
BSR_inoc_216555_39
unknown

Not on your lists

comp(40454..41320)
DNA (867bp) protein (289aa)

This feature has no annotations

BSR_inoc_216555_40
Clostridium sp. CAG:307, Tenericutes, Bacteria

Not on your lists

comp(41439..42566)
DNA (1128bp) protein (376aa)
RNA polymerase sigma factor SigA n=1 Tax=Clostridium sp. CAG:307 RepID=R7GF20_9CLOT
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=1262795 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:307.;"
RpoD subfamily RNA polymerase sigma-70 subunit
BSR_inoc_216555_41
Turicibacter sanguinis, Turicibacter, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(42743..44038)
DNA (1296bp) protein (432aa)
Enolase {ECO:0000256|HAMAP-Rule:MF_00318}; EC=4.2.1.11 {ECO:0000256|HAMAP-Rule:MF_00318};; 2-phospho-D-glycerate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00318}; 2-phosphoglycerate dehydratase {ECO:0000256|HAMAP-Rule:MF_00318}; TaxID=702450 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Turicibacter.;" source="Turicibacter sanguinis PC909.;"
eno; Enolase (EC:4.2.1.11)
Enolase n=2 Tax=Turicibacter RepID=D4W748_9FIRM
BSR_inoc_216555_42
Coprobacillus sp. CAG:698, Tenericutes, Bacteria

Not on your lists

comp(44051..45586)
DNA (1536bp) protein (512aa)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase {ECO:0000256|HAMAP-Rule:MF_01038, ECO:0000256|SAAS:SAAS00058362}; Short=BPG-independent PGAM {ECO:0000256|HAMAP-Rule:MF_01038};; Short=Phosphoglyceromutase {ECO:0000256|HAMAP-Rule:MF_01038};; Short=iPGM {ECO:0000256|HAMAP-Rule:MF_01038};; EC=5.4.2.12 {ECO:0000256|HAMAP-Rule:MF_01038, ECO:0000256|SAAS:SAAS00058367};; TaxID=1262856 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:698.;"
gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase (EC:5.4.2.12)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase n=1 Tax=Coprobacillus sp. CAG:698 RepID=R5G656_9FIRM
BSR_inoc_216555_43
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(45657..46280)
DNA (624bp) protein (208aa)
Uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y9X0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEF67243.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
hypothetical protein
BSR_inoc_216555_44
Coprobacillus sp. CAG:698, Tenericutes, Bacteria

Not on your lists

comp(46473..47579)
DNA (1107bp) protein (369aa)
Cell division protein FtsZ n=1 Tax=Coprobacillus sp. CAG:698 RepID=R5FW86_9FIRM
Cell division protein FtsZ {ECO:0000256|HAMAP-Rule:MF_00909, ECO:0000256|RuleBase:RU000631}; TaxID=1262856 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:698.;"
ftsZ; Cell division protein FtsZ
BSR_inoc_216555_45
Firmicutes bacterium CAG:313, Tenericutes, Bacteria

Not on your lists

comp(47703..48584)
DNA (882bp) protein (294aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:313 RepID=R6XI01_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD21180.1}; TaxID=1263017 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:313.;"
BSR_inoc_216555_46
Coprobacillus sp. CAG:698, Tenericutes, Bacteria

Not on your lists

comp(48562..49695)
DNA (1134bp) protein (378aa)
Queuine tRNA-ribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777}; EC=2.4.2.29 {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777};; Guanine insertion enzyme {ECO:0000256|HAMAP-Rule:MF_00168}; tRNA-guanine transglycosylase {ECO:0000256|HAMAP-Rule:MF_00168}; TaxID=1262856 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:698.;"
queuine tRNA-ribosyltransferase (EC:2.4.2.29)
Queuine tRNA-ribosyltransferase n=1 Tax=Coprobacillus sp. CAG:698 RepID=R5FSG0_9FIRM
BSR_inoc_216555_47
Coprobacillus sp. CAG:698, Tenericutes, Bacteria

Not on your lists

comp(49760..50782)
DNA (1023bp) protein (341aa)
S-adenosylmethionine:tRNA ribosyltransferase-isomerase {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094456}; EC=2.4.99.17 {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094434};; Queuosine biosynthesis protein QueA {ECO:0000256|HAMAP-Rule:MF_00113}; TaxID=1262856 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:698.;"
S-adenosylmethionine:tRNA ribosyltransferase-isomerase n=1 Tax=Coprobacillus sp. CAG:698 RepID=R5G4H3_9FIRM
queA; S-adenosylmethionine--tRNA ribosyltransferase-isomerase
BSR_inoc_216555_48
Coprobacillus sp. CAG:698, Tenericutes, Bacteria

Not on your lists

comp(50763..51758)
DNA (996bp) protein (332aa)
Holliday junction ATP-dependent DNA helicase RuvB {ECO:0000256|HAMAP-Rule:MF_00016}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00016};; TaxID=1262856 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:698.;"
ruvB; Holliday junction ATP-dependent DNA helicase RuvB (EC:3.6.4.12)
Holliday junction ATP-dependent DNA helicase RuvB n=1 Tax=Coprobacillus sp. CAG:698 RepID=R5G5Q3_9FIRM
BSR_inoc_216555_49
Coprobacillus sp. CAG:698, Tenericutes, Bacteria

Not on your lists

51825..52382
DNA (558bp) protein (186aa)
Holliday junction ATP-dependent DNA helicase RuvA {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058935}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058896};; TaxID=1262856 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:698.;"
ruvA; Holliday junction ATP-dependent DNA helicase RuvA (EC:3.6.4.12)
Holliday junction ATP-dependent DNA helicase RuvA n=1 Tax=Coprobacillus sp. CAG:698 RepID=R5FRV3_9FIRM
BSR_inoc_216555_50
unknown

Not on your lists

comp(52405..54246)
DNA (1842bp) protein (614aa)

This feature has no annotations

BSR_inoc_216555_51
Coprobacillus sp. CAG:698, Tenericutes, Bacteria

Not on your lists


comp(54259..55653)
DNA (1395bp) protein (465aa)
Signal recognition particle protein n=1 Tax=Coprobacillus sp. CAG:698 RepID=R5FSF3_9FIRM
Signal recognition particle protein {ECO:0000256|HAMAP-Rule:MF_00306}; Fifty-four homolog {ECO:0000256|HAMAP-Rule:MF_00306}; TaxID=1262856 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:698.;"
ffh; Signal recognition particle protein
BSR_inoc_216555_52
Bacillus licheniformis, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(55658..55978)
DNA (321bp) protein (107aa)
UPF0122 protein BaLi_c18500 n=2 Tax=Bacillus RepID=R9TTJ1_BACLI
ylxM; YlxM
UPF0122 protein ylxM {ECO:0000256|HAMAP-Rule:MF_00245}; TaxID=766760 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus licheniformis 9945A.;"
BSR_inoc_216555_53
Coprobacillus sp. CAG:698, Tenericutes, Bacteria

Not on your lists

comp(55982..56953)
DNA (972bp) protein (324aa)
Signal recognition particle receptor FtsY n=1 Tax=Coprobacillus sp. CAG:698 RepID=R5G5P7_9FIRM
Signal recognition particle receptor FtsY {ECO:0000256|HAMAP-Rule:MF_00920}; Short=SRP receptor {ECO:0000256|HAMAP-Rule:MF_00920};; TaxID=1262856 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:698.;"
signal recognition particle-docking protein FtsY
BSR_inoc_216555_54
GWF2_Tenericutes_57_13_curated, Tenericutes, Bacteria

Not on your lists

57106..57693
DNA (588bp) protein (196aa)
Transcriptional regulator, TetR family id=3902579 bin=GWF2_Firmicute_57_13 species=Thermaerobacter marianensis genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Firmicute_57_13 organism_group=Firmicute
transcriptional regulator, TetR family
Tax=GWF2_Tenericutes_57_13_curated
BSR_inoc_216555_55
BJP_IG2103_SUB10_Tenericutes_35_49, Mollicutes, Tenericutes, Bacteria

Not on your lists

57690..58559
DNA (870bp) protein (290aa)
ABC transporter related protein id=3902581 bin=GWF2_Firmicute_57_13 species=Dethiobacter alkaliphilus genus=Dethiobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Firmicute_57_13 organism_group=Firmicute
ABC transporter ATPase
Tax=BJP_IG2103_SUB10_Tenericutes_35_49
BSR_inoc_216555_56
GWF2_Tenericutes_57_13_curated, Tenericutes, Bacteria

Not on your lists

58543..59259
DNA (717bp) protein (239aa)
ABC-type transport system, permease component id=3902653 bin=GWF2_Firmicute_57_13 species=Acholeplasma laidlawii genus=Acholeplasma taxon_order=Acholeplasmatales taxon_class=Mollicutes phylum=Tenericutes tax=GWF2_Firmicute_57_13 organism_group=Firmicute
ABC transporter permease
Tax=GWF2_Tenericutes_57_13_curated
BSR_inoc_216555_57
BJP_IG2103_SUB10_Tenericutes_35_49, Mollicutes, Tenericutes, Bacteria

Not on your lists

59261..60058
DNA (798bp) protein (266aa)
ABC-type transport system, permease component id=3902655 bin=GWF2_Firmicute_57_13 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Firmicute_57_13 organism_group=Firmicute
Fluoroquinolones export permease protein
Tax=BJP_IG2103_SUB10_Tenericutes_35_49
BSR_inoc_216555_58
Coprobacillus sp. CAG:698, Tenericutes, Bacteria

Not on your lists

comp(60090..62081)
DNA (1992bp) protein (664aa)
DNA topoisomerase 1 {ECO:0000256|HAMAP-Rule:MF_00952}; EC=5.99.1.2 {ECO:0000256|HAMAP-Rule:MF_00952};; DNA topoisomerase I {ECO:0000256|HAMAP-Rule:MF_00952}; TaxID=1262856 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:698.;"
topA; DNA topoisomerase 1 (EC:5.99.1.2)
DNA topoisomerase 1 n=1 Tax=Coprobacillus sp. CAG:698 RepID=R5G3S5_9FIRM
BSR_inoc_216555_59
Clostridium sp. CAG:307, Tenericutes, Bacteria

Not on your lists

comp(62196..62819)
DNA (624bp) protein (208aa)
Ribonuclease HII {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016879}; Short=RNase HII {ECO:0000256|HAMAP-Rule:MF_00052};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016872};; TaxID=1262795 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:307.;"
ribonuclease HII (EC:3.1.26.4)
Ribonuclease HII n=1 Tax=Clostridium sp. CAG:307 RepID=R7GEX7_9CLOT
BSR_inoc_216555_60
Coprobacillus sp. CAG:698, Tenericutes, Bacteria

Not on your lists

comp(62812..63648)
DNA (837bp) protein (279aa)
Ribosome biogenesis GTPase A n=1 Tax=Coprobacillus sp. CAG:698 RepID=R5FQ15_9FIRM
Ribosome biogenesis GTPase A {ECO:0000256|PIRNR:PIRNR006230}; TaxID=1262856 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:698.;"
rbgA; ribosomal biogenesis GTPase
Displaying items 31-60 of 76 in total

View Taxonomy