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BSR_inoc_216555

Search features with annotation key words

Displaying items 1-30 of 76 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BSR_inoc_216555_1
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..1206)
DNA (1206bp) protein (402aa)
ABC transporter, ATP-binding protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1Q3K1_9CLOT
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EKY22584.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
ABC transporter ATP-binding protein/permease
BSR_inoc_216555_2
Thermobrachium celere, Thermobrachium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1384..2298
DNA (915bp) protein (305aa)
Pseudouridine-5'-phosphate glycosidase {ECO:0000256|HAMAP-Rule:MF_01876}; Short=PsiMP glycosidase {ECO:0000256|HAMAP-Rule:MF_01876};; EC=4.2.1.70 {ECO:0000256|HAMAP-Rule:MF_01876};; TaxID=941824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Thermobrachium.;" source="Thermobrachium celere DSM 8682.;"
Pseudouridine-5'-phosphate glycosidase n=1 Tax=Thermobrachium celere DSM 8682 RepID=R7RSM6_9CLOT
pigment biosynthesis protein
BSR_inoc_216555_3
Coprobacillus sp. CAG:698, Tenericutes, Bacteria

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2295..3464
DNA (1170bp) protein (390aa)
UPF0348 protein BN756_01290 n=1 Tax=Coprobacillus sp. CAG:698 RepID=R5G6F5_9FIRM
UPF0348 protein BN756_01290 {ECO:0000256|HAMAP-Rule:MF_01539}; TaxID=1262856 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:698.;"
hypothetical protein
BSR_inoc_216555_4
Coprobacillus sp. CAG:698, Tenericutes, Bacteria

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3461..4438
DNA (978bp) protein (326aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:698 RepID=R5FSH5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY08025.1}; TaxID=1262856 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:698.;"
ylxH; Flagellum site-determining protein YlxH
BSR_inoc_216555_5
Coprobacillus sp. CAG:698, Tenericutes, Bacteria

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comp(4469..4813)
DNA (345bp) protein (115aa)
UPF0473 protein HMPREF9402_1046 n=1 Tax=Coprobacillus sp. CAG:698 RepID=R5G562_9FIRM
UPF0473 protein BN756_01286 {ECO:0000256|HAMAP-Rule:MF_01448}; TaxID=1262856 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:698.;"
hypothetical protein
BSR_inoc_216555_6
Coprobacillus sp. CAG:698, Tenericutes, Bacteria

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comp(4826..5251)
DNA (426bp) protein (142aa)
Putative Holliday junction resolvase {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086483}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086510};; TaxID=1262856 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:698.;"
Putative Holliday junction resolvase n=1 Tax=Coprobacillus sp. CAG:698 RepID=R5G6F0_9FIRM
hypothetical protein
BSR_inoc_216555_7
Firmicutes bacterium CAG:313, Tenericutes, Bacteria

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comp(5248..7944)
DNA (2697bp) protein (899aa)
Alanine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015689}; EC=6.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015673};; Alanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00036}; TaxID=1263017 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:313.;"
alaS; Alanine--tRNA ligase (EC:6.1.1.7)
Alanine--tRNA ligase n=1 Tax=Firmicutes bacterium CAG:313 RepID=R6XJ91_9FIRM
BSR_inoc_216555_8
Coprobacillus sp. CAG:698, Tenericutes, Bacteria

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comp(8183..9838)
DNA (1656bp) protein (552aa)
Ribonuclease J 2 (EC:3.1.-.-)
Ribonuclease J 2 n=1 Tax=Coprobacillus sp. CAG:698 RepID=R5FWJ6_9FIRM
Ribonuclease J 2 {ECO:0000313|EMBL:CCY08019.1}; TaxID=1262856 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:698.;"
BSR_inoc_216555_9
unknown

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10549..11166
DNA (618bp) protein (206aa)

This feature has no annotations

BSR_inoc_216555_10
BJP_IG2102_Acholeplasmatales_34_18, Acholeplasmatales, Mollicutes, Tenericutes, Bacteria

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comp(11193..11738)
DNA (546bp) protein (182aa)
ppa; Inorganic pyrophosphatase (Pyrophosphate phospho-hydrolase) (EC:3.6.1.1)
Inorganic pyrophosphatase id=3835742 bin=GWA2_Tenericute_38_26 species=Acholeplasma laidlawii genus=Acholeplasma taxon_order=Acholeplasmatales taxon_class=Mollicutes phylum=Tenericutes tax=GWA2_Tenericute_38_26 organism_group=Tenericutes organism_desc=Closest isolate is 1.5 Mb genome
Tax=BJP_IG2102_Acholeplasmatales_34_18
BSR_inoc_216555_11
Coprobacillus sp. CAG:698, Tenericutes, Bacteria

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comp(11739..12095)
DNA (357bp) protein (119aa)
molybdopterin oxidoreductase n=1 Tax=Clostridium sporosphaeroides RepID=UPI00035C4452
Zinc finger protein {ECO:0000313|EMBL:CCY07345.1}; TaxID=1262856 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:698.;"
hypothetical protein
BSR_inoc_216555_12
Coprobacillus sp. CAG:698, Tenericutes, Bacteria

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comp(12088..13335)
DNA (1248bp) protein (416aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:698 RepID=R5FUK4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY07344.1}; TaxID=1262856 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:698.;"
NAD(FAD)-dependent dehydrogenase
BSR_inoc_216555_13
Coprobacillus sp. CAG:698, Tenericutes, Bacteria

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comp(13322..14758)
DNA (1437bp) protein (479aa)
FAD dependent oxidoreductase n=1 Tax=Coprobacillus sp. CAG:698 RepID=R5FR09_9FIRM
FAD dependent oxidoreductase {ECO:0000313|EMBL:CCY07343.1}; TaxID=1262856 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:698.;"
FAD dependent oxidoreductase
BSR_inoc_216555_14
Coprobacillus sp. CAG:698, Tenericutes, Bacteria

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comp(14767..16269)
DNA (1503bp) protein (501aa)
Glycerol kinase {ECO:0000256|HAMAP-Rule:MF_00186, ECO:0000256|SAAS:SAAS00029376}; EC=2.7.1.30 {ECO:0000256|HAMAP-Rule:MF_00186, ECO:0000256|SAAS:SAAS00029376};; ATP:glycerol 3-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00186}; Glycerokinase {ECO:0000256|HAMAP-Rule:MF_00186}; TaxID=1262856 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:698.;"
Glycerol kinase n=1 Tax=Coprobacillus sp. CAG:698 RepID=R5G335_9FIRM
glycerol kinase
BSR_inoc_216555_15
Firmicutes bacterium CAG:313, Tenericutes, Bacteria

Not on your lists

16510..17049
DNA (540bp) protein (180aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:313 RepID=R6XSN9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD22019.1}; TaxID=1263017 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:313.;"
BSR_inoc_216555_16
RIFOXYB2_FULL_Tenericutes_36_25_curated, Tenericutes, Bacteria

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comp(17080..18099)
DNA (1020bp) protein (340aa)
Putative uncharacterized protein id=2424516 bin=GWF1_Tenericute_35_14 species=Clostridium phytofermentans genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF1_Tenericute_35_14 organism_group=Tenericutes
hypothetical protein
Tax=RIFOXYB2_FULL_Tenericutes_36_25_curated
BSR_inoc_216555_17
Coprobacillus sp. CAG:698, Tenericutes, Bacteria

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comp(18109..18660)
DNA (552bp) protein (184aa)
Phosphatidylglycerophosphatase A n=1 Tax=Coprobacillus sp. CAG:698 RepID=R5G687_9FIRM
Phosphatidylglycerophosphatase A {ECO:0000313|EMBL:CCY07981.1}; TaxID=1262856 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:698.;"
Phosphatidylglycerophosphatase A
BSR_inoc_216555_18
Coprobacillus sp. CAG:698, Tenericutes, Bacteria

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comp(18657..19589)
DNA (933bp) protein (311aa)
Methionyl-tRNA formyltransferase {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00043680}; EC=2.1.2.9 {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00150580};; TaxID=1262856 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:698.;"
methionyl-tRNA formyltransferase (EC:2.1.2.9)
Methionyl-tRNA formyltransferase n=1 Tax=Coprobacillus sp. CAG:698 RepID=R5FS91_9FIRM
BSR_inoc_216555_19
Coprobacillus sp. CAG:698, Tenericutes, Bacteria

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comp(19594..21864)
DNA (2271bp) protein (757aa)
Primosome assembly protein PriA n=1 Tax=Coprobacillus sp. CAG:698 RepID=R5FWB7_9FIRM
Primosome assembly protein PriA {ECO:0000313|EMBL:CCY07979.1}; TaxID=1262856 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:698.;"
priA; primosomal protein N prime
BSR_inoc_216555_20
Staphylococcus sp. CAG:324, Tenericutes, Bacteria

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comp(21909..22109)
DNA (201bp) protein (67aa)
DNA-directed RNA polymerase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00054253}; Short=RNAP omega subunit {ECO:0000256|HAMAP-Rule:MF_00366};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00094401};; RNA polymerase omega subunit {ECO:0000256|HAMAP-Rule:MF_00366}; Transcriptase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366}; TaxID=1262969 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus; environmental samples.;" source="Staphylococcus sp. CAG:324.;"
DNA-directed RNA polymerase subunit omega n=1 Tax=Staphylococcus sp. CAG:324 RepID=R6TU38_9STAP
DNA-directed RNA polymerase subunit omega
BSR_inoc_216555_21
Acholeplasma brassicae, Acholeplasma, Acholeplasmatales, Mollicutes, Tenericutes, Bacteria

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comp(22148..22774)
DNA (627bp) protein (209aa)
gmk; Guanylate kinase (EC:2.7.4.8)
Guanylate kinase {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00021750}; EC=2.7.4.8 {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00036702};; GMP kinase {ECO:0000256|HAMAP-Rule:MF_00328}; TaxID=61635 species="Bacteria; Tenericutes; Mollicutes; Acholeplasmatales; Acholeplasmataceae; Acholeplasma.;" source="Acholeplasma brassicae.;"
Guanylate kinase n=1 Tax=Acholeplasma brassicae RepID=U4KRB8_9MOLU
BSR_inoc_216555_22
Coprobacillus sp. CAG:698, Tenericutes, Bacteria

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22877..24439
DNA (1563bp) protein (521aa)
Putative persistent RNA/DNA binding protein n=1 Tax=Coprobacillus sp. CAG:698 RepID=R5G679_9FIRM
Putative persistent RNA/DNA binding protein {ECO:0000313|EMBL:CCY07976.1}; TaxID=1262856 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:698.;"
fibronectin-binding protein
BSR_inoc_216555_23
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(24456..25091)
DNA (636bp) protein (212aa)
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435};; DNA-(apurinic or apyrimidinic site) lyase {ECO:0000256|HAMAP-Rule:MF_00942}; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:221.;"
nth; endonuclease III (EC:4.2.99.18)
Endonuclease III n=1 Tax=Clostridium sp. CAG:221 RepID=R6FSE7_9CLOT
BSR_inoc_216555_24
Mollicutes bacterium HR1, Mollicutes, Tenericutes, Bacteria

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comp(25057..25674)
DNA (618bp) protein (206aa)
DnaD domain protein n=1 Tax=Haloplasma contractile SSD-17B RepID=F7PVP0_9BACT
dnaD; DNA replication protein DnaD
DNA replication protein DnaD {ECO:0000313|EMBL:AIO19563.1}; TaxID=1541959 species="Bacteria; Tenericutes; Mollicutes.;" source="Mollicutes bacterium HR1.;"
BSR_inoc_216555_25
Firmicutes bacterium CAG:884, Firmicutes, Bacteria

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comp(25674..26336)
DNA (663bp) protein (221aa)
Ribonuclease 3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231299}; EC=3.1.26.3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231445};; Ribonuclease III {ECO:0000256|HAMAP-Rule:MF_00104}; TaxID=1262990 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:884.;"
Ribonuclease 3 n=1 Tax=Firmicutes bacterium CAG:884 RepID=R5MSQ6_9FIRM
ribonuclease III
BSR_inoc_216555_26
Acholeplasma brassicae, Acholeplasma, Acholeplasmatales, Mollicutes, Tenericutes, Bacteria

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comp(26356..27357)
DNA (1002bp) protein (334aa)
Phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_00019, ECO:0000256|SAAS:SAAS00054336}; EC=2.3.1.n2 {ECO:0000256|HAMAP-Rule:MF_00019, ECO:0000256|SAAS:SAAS00054327};; Acyl-ACP phosphotransacylase {ECO:0000256|HAMAP-Rule:MF_00019}; Acyl-[acyl-carrier-protein]--phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_00019}; Phosphate-acyl-ACP acyltransferase {ECO:0000256|HAMAP-Rule:MF_00019}; TaxID=61635 species="Bacteria; Tenericutes; Mollicutes; Acholeplasmatales; Acholeplasmataceae; Acholeplasma.;" source="Acholeplasma brassicae.;"
Phosphate acyltransferase n=1 Tax=Acholeplasma brassicae RepID=U4KML3_9MOLU
plsX; Phosphate acyltransferase
BSR_inoc_216555_27
Coprobacillus sp. CAG:698, Tenericutes, Bacteria

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comp(27369..29390)
DNA (2022bp) protein (674aa)
ATP-dependent DNA helicase RecG n=1 Tax=Coprobacillus sp. CAG:698 RepID=R5FS79_9FIRM
ATP-dependent DNA helicase RecG {ECO:0000313|EMBL:CCY07970.1}; TaxID=1262856 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:698.;"
ATP-dependent DNA helicase RecG
BSR_inoc_216555_28
Coprobacillus sp. CAG:698, Tenericutes, Bacteria

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comp(29438..31120)
DNA (1683bp) protein (561aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:698 RepID=R5FSZ2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY07968.1}; TaxID=1262856 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:698.;"
DAK2 domain protein
BSR_inoc_216555_29
Coprobacillus sp. CAG:698, Tenericutes, Bacteria

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31341..31532
DNA (192bp) protein (64aa)
50S ribosomal protein L28 n=1 Tax=Coprobacillus sp. CAG:698 RepID=R5G4Y5_9FIRM
50S ribosomal protein L28 {ECO:0000256|HAMAP-Rule:MF_00373}; TaxID=1262856 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:698.;"
rpmB; 50S ribosomal protein L28
BSR_inoc_216555_30
unknown

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comp(31617..32663)
DNA (1047bp) protein (349aa)

This feature has no annotations

Displaying items 1-30 of 76 in total

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