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BSR_inoc_48348

Search features with annotation key words

Displaying items 1-30 of 120 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BSR_inoc_48348_1
Solemya velum gill symbiont, Gammaproteobacteria, Proteobacteria, Bacteria

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3..773
DNA (771bp) protein (257aa)
hypothetical protein n=5 Tax=Ectothiorhodospiraceae RepID=UPI000364EAD8
Transposase {ECO:0000313|EMBL:KHF25911.1}; TaxID=2340 species="Bacteria; Proteobacteria; Gammaproteobacteria; sulfur-oxidizing symbionts.;" source="Solemya velum gill symbiont.;"
integrase
BSR_inoc_48348_2
Nitrincola sp. AK23, Nitrincola, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(785..1444)
DNA (660bp) protein (220aa)
Putative uncharacterized protein n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4D9E0_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EXJ13155.1}; TaxID=1229521 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Nitrincola.;" source="Nitrincola sp. AK23.;"
membrane protein
BSR_inoc_48348_3
unknown

Not on your lists

comp(1447..2151)
DNA (705bp) protein (235aa)
hypothetical protein n=1 Tax=Thiomicrospira halophila RepID=UPI0003771BD5
BSR_inoc_48348_4
Thiomicrospira crunogena, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2254..3408)
DNA (1155bp) protein (385aa)
hypothetical protein n=1 Tax=Thiomicrospira halophila RepID=UPI0003680E67
signal recognition particle-docking protein FtsY
Signal recognition particle receptor FtsY {ECO:0000256|HAMAP-Rule:MF_00920}; Short=SRP receptor {ECO:0000256|HAMAP-Rule:MF_00920};; TaxID=317025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thiomicrospira.;" source="Thiomicrospira crunogena (strain XCL-2).;"
BSR_inoc_48348_5
Thioalkalimicrobium cyclicum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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3573..4940
DNA (1368bp) protein (456aa)
processing peptidase (EC:3.4.24.64)
Processing peptidase {ECO:0000313|EMBL:AEG31045.1}; EC=3.4.24.64 {ECO:0000313|EMBL:AEG31045.1};; Flags: Precursor;; TaxID=717773 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1).;"
Processing peptidase n=1 Tax=Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1) RepID=F6DA08_THICA
BSR_inoc_48348_6
Thiomicrospira crunogena, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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4940..6244
DNA (1305bp) protein (435aa)
M16 peptidase family protein n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31E93_THICR
peptidase M16-like
M16 peptidase family protein {ECO:0000313|EMBL:ABB42530.1}; Flags: Precursor;; TaxID=317025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thiomicrospira.;" source="Thiomicrospira crunogena (strain XCL-2).;"
BSR_inoc_48348_7
Hydrogenovibrio marinus, Hydrogenovibrio, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6264..6860
DNA (597bp) protein (199aa)
methyltransferase (EC:2.1.1.171)
hypothetical protein n=1 Tax=Thiomicrospira arctica RepID=UPI00037BEF2E
16S rRNA methyltransferase {ECO:0000313|EMBL:KDN96332.1}; TaxID=28885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Hydrogenovibrio.;" source="Hydrogenovibrio marinus.;"
BSR_inoc_48348_8
Thiomicrospira crunogena, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6919..7404
DNA (486bp) protein (162aa)
coenzyme A biosynthesis protein (EC:2.7.7.3)
Phosphopantetheine adenylyltransferase {ECO:0000255|HAMAP-Rule:MF_00151}; EC=2.7.7.3 {ECO:0000255|HAMAP-Rule:MF_00151};; Dephospho-CoA pyrophosphorylase {ECO:0000255|HAMAP-Rule:MF_00151}; Pantetheine-phosphate adenylyltransferase {ECO:0000255|HAMAP-Rule:MF_00151}; Short=PPAT {ECO:0000255|HAMAP-Rule:MF_00151};; TaxID=317025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thiomicrospira.;" source="Thiomicrospira crunogena (strain XCL-2).;"
phosphopantetheine adenylyltransferase n=1 Tax=Thiomicrospira halophila RepID=UPI00037E13EE
BSR_inoc_48348_9
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7450..10146)
DNA (2697bp) protein (899aa)
ATPase, P-type (Transporting), HAD superfamily, subfamily IC n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4D9F9_9GAMM
ATPase
ATPase {ECO:0000313|EMBL:AHF00640.1}; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
BSR_inoc_48348_10
Thioalkalimicrobium cyclicum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10168..10623)
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1) RepID=F6DAA0_THICA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEG31066.1}; Flags: Precursor;; TaxID=717773 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1).;"
BSR_inoc_48348_11
Thiomicrospira crunogena, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10813..11649)
DNA (837bp) protein (279aa)
formamidopyrimidine-DNA glycosylase (EC:3.2.2.23)
Formamidopyrimidine-DNA glycosylase {ECO:0000255|HAMAP-Rule:MF_00103}; Short=Fapy-DNA glycosylase {ECO:0000255|HAMAP-Rule:MF_00103};; EC=3.2.2.23 {ECO:0000255|HAMAP-Rule:MF_00103};; DNA-(apurinic or apyrimidinic site) lyase MutM {ECO:0000255|HAMAP-Rule:MF_00103}; Short=AP lyase MutM {ECO:0000255|HAMAP-Rule:MF_00103};; EC=4.2.99.18 {ECO:0000255|HAMAP-Rule:MF_00103};; TaxID=317025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thiomicrospira.;" source="Thiomicrospira crunogena (strain XCL-2).;"
Formamidopyrimidine-DNA glycosylase n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=FPG_THICR
BSR_inoc_48348_12
unknown

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11934..12128
DNA (195bp) protein (65aa)

This feature has no annotations

BSR_inoc_48348_13
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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12230..12529
DNA (300bp) protein (100aa)
hypothetical protein n=1 Tax=Thiomicrospira arctica RepID=UPI0003828921
putative anti sigma factor antagonist
Putative anit sigma factor antagonist {ECO:0000313|EMBL:CAY51105.1}; TaxID=216595 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens (strain SBW25).;"
BSR_inoc_48348_14
Thiomicrospira crunogena, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12878..14725
DNA (1848bp) protein (616aa)
hypothetical protein n=1 Tax=Thiomicrospira arctica RepID=UPI00036CCB50
diguanylate cyclase
Diguanylate cyclase (GGDEF domain) {ECO:0000313|EMBL:ABB42443.1}; TaxID=317025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thiomicrospira.;" source="Thiomicrospira crunogena (strain XCL-2).;"
BSR_inoc_48348_15
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14870..15256
DNA (387bp) protein (129aa)
Glycine cleavage system H protein n=1 Tax=Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1) RepID=F6DAA5_THICA
glycine cleavage system protein H
Glycine cleavage system H protein {ECO:0000256|HAMAP-Rule:MF_00272}; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
BSR_inoc_48348_16
Thioalkalimicrobium cyclicum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15249..16448
DNA (1200bp) protein (400aa)
Methyltransferase small n=1 Tax=Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1) RepID=F6DAA6_THICA
methyltransferase small
Methyltransferase small {ECO:0000313|EMBL:AEG31072.1}; TaxID=717773 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1).;"
BSR_inoc_48348_17
Thauera phenylacetica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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16452..18248
DNA (1797bp) protein (599aa)
PAS/PAC and GAF sensor-containing diguanylate cyclase/phosphodiesterase n=1 Tax=Thauera phenylacetica B4P RepID=N6Z421_9RHOO
PAS/PAC and GAF sensor-containing diguanylate cyclase/phosphodiesterase {ECO:0000313|EMBL:ENO98655.1}; TaxID=1234382 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera phenylacetica B4P.;"
PAS/PAC and GAF sensor-containing diguanylate cyclase/phosphodiesterase
BSR_inoc_48348_18
Hydrogenovibrio marinus, Hydrogenovibrio, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18406..18660)
DNA (255bp) protein (85aa)
hypothetical protein n=1 Tax=Thiomicrospira arctica RepID=UPI000375A1B2
Transcriptional regulator {ECO:0000313|EMBL:KDN94959.1}; TaxID=28885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Hydrogenovibrio.;" source="Hydrogenovibrio marinus.;"
transcriptional regulator
BSR_inoc_48348_19
Hydrogenovibrio marinus, Hydrogenovibrio, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18657..20990)
DNA (2334bp) protein (778aa)
hypothetical protein n=1 Tax=Thiomicrospira arctica RepID=UPI00037323AD
Ferrous iron transporter B {ECO:0000313|EMBL:KDN94960.1}; TaxID=28885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Hydrogenovibrio.;" source="Hydrogenovibrio marinus.;"
ferrous iron transport protein B
BSR_inoc_48348_20
Hydrogenovibrio marinus, Hydrogenovibrio, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20987..21217)
DNA (231bp) protein (77aa)
hypothetical protein n=1 Tax=Thiomicrospira arctica RepID=UPI00037BE6DE
Uncharacterized protein {ECO:0000313|EMBL:KDN94961.1}; TaxID=28885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Hydrogenovibrio.;" source="Hydrogenovibrio marinus.;"
BSR_inoc_48348_21
Thioalkalimicrobium cyclicum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21350..24157)
DNA (2808bp) protein (936aa)
UvrABC system protein A n=1 Tax=Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1) RepID=F6D9H5_THICA
UvrABC system protein A
UvrABC system protein A {ECO:0000256|HAMAP-Rule:MF_00205, ECO:0000256|SAAS:SAAS00088996}; Short=UvrA protein {ECO:0000256|HAMAP-Rule:MF_00205};; Excinuclease ABC subunit A {ECO:0000256|HAMAP-Rule:MF_00205}; TaxID=717773 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1).;"
BSR_inoc_48348_22
unknown

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24516..24665
DNA (150bp) protein (50aa)

This feature has no annotations

BSR_inoc_48348_23
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(24882..25733)
DNA (852bp) protein (284aa)
modD protein (EC:2.4.2.19)
Putative Nicotinate-nucleotide diphosphorylase ModD {ECO:0000313|EMBL:CDW92886.1}; EC=2.4.2.19 {ECO:0000313|EMBL:CDW92886.1};; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
ModD protein n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X3P9_THIK1
BSR_inoc_48348_24
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25743..26540)
DNA (798bp) protein (266aa)
Putative uncharacterized protein n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4DBY2_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHF01699.1}; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
BSR_inoc_48348_25
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26545..27621)
DNA (1077bp) protein (359aa)
Molybdate-transporting ATPase {ECO:0000256|SAAS:SAAS00055222}; EC=3.6.3.29 {ECO:0000256|SAAS:SAAS00055222};; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
Molybdate ABC transporter, ATPase subunit n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4DBY1_9GAMM
molybdate ABC transporter ATP-binding protein
BSR_inoc_48348_26
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27626..28321)
DNA (696bp) protein (232aa)
Molybdate ABC transporter, inner membrane subunit n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4DBY0_9GAMM
molybdenum ABC transporter permease
Molybdenum ABC transporter permease {ECO:0000313|EMBL:AHF01697.1}; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
BSR_inoc_48348_27
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28494..29258)
DNA (765bp) protein (255aa)
Molybdenum ABC transporter, periplasmic molybdate-binding protein n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4DBX9_9GAMM
molybdenum ABC transporter substrate-binding protein
Molybdenum ABC transporter substrate-binding protein {ECO:0000313|EMBL:AHF01696.1}; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
BSR_inoc_48348_28
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29495..30295)
DNA (801bp) protein (267aa)
Transcriptional regulator, ModE family n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4DBX8_9GAMM
ModE family transcriptional regulator
ModE family transcriptional regulator {ECO:0000313|EMBL:AHF01695.1}; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
BSR_inoc_48348_29
Thiomicrospira crunogena, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30651..31055
DNA (405bp) protein (135aa)
hypothetical protein n=1 Tax=Thiomicrospira halophila RepID=UPI0003712ECD
membrane protein-like protein
Uncharacterized protein {ECO:0000313|EMBL:ABB41122.1}; TaxID=317025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thiomicrospira.;" source="Thiomicrospira crunogena (strain XCL-2).;"
BSR_inoc_48348_30
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31103..31846)
DNA (744bp) protein (248aa)
Putative uncharacterized protein n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4D9E7_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHF00628.1}; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
Displaying items 1-30 of 120 in total

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