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BSR_inoc_66767

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Displaying items 1-30 of 40 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BSR_inoc_66767_trna_2
unknown

Not on your lists

comp(433..506)
DNA (74bp)
transferRNA Val
BSR_inoc_66767_trna_1
unknown

Not on your lists

comp(538..621)
DNA (84bp)
transferRNA Leu
BSR_inoc_66767_1
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(721..1365)
DNA (645bp) protein (215aa)
Transcriptional regulator, TetR family n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4DAR0_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHF02387.1}; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
BSR_inoc_66767_2
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1495..2655
DNA (1161bp) protein (387aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4DAQ9_9GAMM
hemolysin D
Hemolysin D {ECO:0000313|EMBL:AHF01966.1}; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
BSR_inoc_66767_3
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2684..5818
DNA (3135bp) protein (1045aa)
Transporter, hydrophobe/amphiphile efflux-1 (HAE1) family n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4DAQ8_9GAMM
transporter
Transporter {ECO:0000313|EMBL:AHF01967.1}; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
BSR_inoc_66767_4
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5811..7241
DNA (1431bp) protein (477aa)
RND efflux system, outer membrane lipoprotein, NodT family n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4DAQ7_9GAMM
RND transporter
RND transporter {ECO:0000313|EMBL:AHF01968.1}; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
BSR_inoc_66767_5
Synechocystis sp. PCC 6714, Synechocystis, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(7504..7929)
DNA (426bp) protein (142aa)
Uncharacterized protein n=7 Tax=Bacteria RepID=H0P5C1_9SYNC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIE72670.1}; TaxID=1147 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Synechocystis.;" source="Synechocystis sp. (strain PCC 6714) (Aphanocapsa sp. (strain PCC; 6714)).;"
BSR_inoc_66767_6
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7943..8236)
DNA (294bp) protein (98aa)
hypothetical protein n=1 Tax=Thiomicrospira halophila RepID=UPI00037CDCF8
Anti-sigma factor antagonist {ECO:0000256|RuleBase:RU003749}; TaxID=1331202 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella bronchiseptica 99-R-0433.;"
anti-sigma factor antagonist
BSR_inoc_66767_7
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8233..10599)
DNA (2367bp) protein (789aa)
hypothetical protein n=1 Tax=Thiomicrospira halophila RepID=UPI000360E679
Uncharacterized protein {ECO:0000313|EMBL:EKE78056.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
protein phosphatase
BSR_inoc_66767_8
RBG_19FT_COMBO_Chloroflexi_48_23_curated, Chloroflexi, Bacteria

Not on your lists

comp(10623..12215)
DNA (1593bp) protein (531aa)
hypothetical protein n=1 Tax=Thiomicrospira halophila RepID=UPI0003798AE0
putative anti-sigma regulatory factor
Tax=RBG_19FT_COMBO_Chloroflexi_48_23_curated
BSR_inoc_66767_9
Methanosphaerula palustris, Methanosphaerula, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(12215..13501)
DNA (1287bp) protein (429aa)
hypothetical protein n=1 Tax=Thiomicrospira halophila RepID=UPI000380A2B2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACL17229.1}; TaxID=521011 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanoregulaceae; Methanosphaerula.;" source="Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c).;"
BSR_inoc_66767_10
Kutzneria albida, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13501..16008)
DNA (2508bp) protein (836aa)
hypothetical protein n=1 Tax=Thiomicrospira halophila RepID=UPI00036E9151
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHH96391.1}; TaxID=1449976 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria albida DSM 43870.;"
BSR_inoc_66767_11
Streptomyces cattleya, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16100..17260)
DNA (1161bp) protein (387aa)
hypothetical protein n=1 Tax=Thiomicrospira halophila RepID=UPI00036AE157
Long-chain-fatty-acid-luciferin-component ligase
Acyl-protein synthetase LuxE {ECO:0000313|EMBL:AEW98565.1}; TaxID=1003195 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces cattleya (strain ATCC 35852 / DSM 46488 / JCM 4925 / NBRC; 14057 / NRRL 8057).;"
BSR_inoc_66767_12
Sulfurimonas denitrificans, Sulfurimonas, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

17451..19472
DNA (2022bp) protein (674aa)
N-6 DNA methylase n=1 Tax=Sulfurimonas denitrificans (strain ATCC 33889 / DSM 1251) RepID=Q30T65_SULDN
N-6 DNA methylase {ECO:0000313|EMBL:ABB43816.1}; TaxID=326298 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Helicobacteraceae; Sulfurimonas.;" source="Sulfurimonas denitrificans (strain ATCC 33889 / DSM 1251); (Thiomicrospira denitrificans (strain ATCC 33889 / DSM 1251)).;"
N-6 DNA methylase
BSR_inoc_66767_13
Microcystis aeruginosa, Microcystis, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

19484..20665
DNA (1182bp) protein (394aa)
Uncharacterized protein n=2 Tax=Microcystis aeruginosa RepID=L8NY82_MICAE
Uncharacterized protein {ECO:0000313|EMBL:ELS49185.1}; TaxID=1235808 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Microcystis.;" source="Microcystis aeruginosa DIANCHI905.;"
type IIS restriction enzyme protein
BSR_inoc_66767_14
Hydrogenovibrio marinus, Hydrogenovibrio, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20777..22096)
DNA (1320bp) protein (440aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=28885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Hydrogenovibrio.;" source="Hydrogenovibrio marinus.;"
Periplasmic sensor signal transduction histidine kinase n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31JS1_THICR
sensor signal transduction histidine kinase
BSR_inoc_66767_15
Thiomicrospira crunogena, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22093..22767)
DNA (675bp) protein (225aa)
Two component transcriptional regulator, winged helix family n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31JS2_THICR
two component transcriptional regulator
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:ABB40601.1}; TaxID=317025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thiomicrospira.;" source="Thiomicrospira crunogena (strain XCL-2).;"
BSR_inoc_66767_16
unknown

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comp(22849..23169)
DNA (321bp) protein (107aa)

This feature has no annotations

BSR_inoc_66767_17
BJP_IG2102_Gammaproteobacteria_62_140, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(23363..26452)
DNA (3090bp) protein (1030aa)
Resistance-Nodulation-Cell Division (RND) superfamily cation efflux transporter n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31JR8_THICR
heavy metal efflux pump CzcA
Tax=BJP_IG2102_Gammaproteobacteria_62_140
BSR_inoc_66767_18
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26452..27564)
DNA (1113bp) protein (371aa)
hypothetical protein n=1 Tax=Lamprocystis purpurea RepID=UPI0003682B49
RND transporter
Tax=CG_Thiomicrospira_01
BSR_inoc_66767_19
Thiomicrospira crunogena, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27561..28736)
DNA (1176bp) protein (392aa)
hypothetical protein n=1 Tax=Thiomicrospira halophila RepID=UPI00037FE914
Outer membrane protein-like
RND outer membrane protein {ECO:0000313|EMBL:ABB40603.1}; Flags: Precursor;; TaxID=317025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thiomicrospira.;" source="Thiomicrospira crunogena (strain XCL-2).;"
BSR_inoc_66767_20
GWA2_Gallionellales_59_43_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28900..29319
DNA (420bp) protein (140aa)
Putative uncharacterized protein n=1 Tax=Gallionella capsiferriformans (strain ES-2) RepID=D9SHK8_GALCS
hypothetical protein
Tax=GWA2_Gallionellales_59_43_curated
BSR_inoc_66767_21
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29554..30246)
DNA (693bp) protein (231aa)
Arylesterase n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4D7F7_9GAMM
esterase
Esterase {ECO:0000313|EMBL:AHF00990.1}; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
BSR_inoc_66767_22
Thioalkalimicrobium cyclicum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30373..30882
DNA (510bp) protein (170aa)
phosphonate-transporting ATPase (EC:3.6.3.28)
Phosphonate-transporting ATPase {ECO:0000313|EMBL:AEG31834.1}; EC=3.6.3.28 {ECO:0000313|EMBL:AEG31834.1};; TaxID=717773 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1).;"
Phosphonate-transporting ATPase n=1 Tax=Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1) RepID=F6D8I3_THICA
BSR_inoc_66767_23
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30879..33386
DNA (2508bp) protein (836aa)
Putative uncharacterized protein n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4D7F9_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHF00988.1}; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
BSR_inoc_66767_24
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33757..35280)
DNA (1524bp) protein (508aa)
L-threonine dehydratase {ECO:0000256|RuleBase:RU362012}; EC=4.3.1.19 {ECO:0000256|RuleBase:RU362012};; Threonine deaminase {ECO:0000256|RuleBase:RU362012}; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
L-threonine dehydratase biosynthetic IlvA n=1 Tax=Thiomicrospira arctica RepID=UPI000368ABCD
L-threonine dehydratase biosynthetic IlvA
BSR_inoc_66767_25

Not on your lists

comp(35932..38928)
DNA (2997bp) protein (999aa)
Uncharacterized protein n=1 Tax=Alcanivorax sp. PN-3 RepID=U7I4C1_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KKN98690.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
type III restriction endonuclease subunit R
BSR_inoc_66767_26
Shewanella sp. MR-7, Shewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(38928..40616)
DNA (1689bp) protein (563aa)
Uncharacterized protein n=1 Tax=Shewanella sp. (strain MR-7) RepID=Q0HQU8_SHESR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABI44507.1}; TaxID=60481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella.;" source="Shewanella sp. (strain MR-7).;"
BSR_inoc_66767_27
Belliella baltica, Belliella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(40662..41687)
DNA (1026bp) protein (342aa)
Virulence protein n=1 Tax=Belliella baltica (strain DSM 15883 / CIP 108006 / LMG 21964 / BA134) RepID=I3Z8S7_BELBD
virulence protein
Virulence protein {ECO:0000313|EMBL:AFL85645.1}; TaxID=866536 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Belliella.;" source="Belliella baltica (strain DSM 15883 / CIP 108006 / LMG 21964 / BA134).;"
BSR_inoc_66767_28
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(41691..42701)
DNA (1011bp) protein (337aa)
Filamentation induced by cAMP protein Fic n=1 Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LQ30_SYNFM
filamentation induced by cAMP protein fic
Tax=CG_Thiomicrospira_01
Displaying items 1-30 of 40 in total

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