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BSR_inoc_67316

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Displaying 17 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BSR_inoc_67316_1
Aromatoleum aromaticum, Aromatoleum, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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3..116
DNA (114bp) protein (38aa)
Transposase n=1 Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5NW73_AROAE
tnp2P13; transposase
Transposase {ECO:0000313|EMBL:CAI10691.1}; TaxID=76114 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Aromatoleum.;" source="Aromatoleum aromaticum (strain EbN1) (Azoarcus sp. (strain EbN1)).;"
BSR_inoc_67316_2
unknown

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comp(398..1030)
DNA (633bp) protein (211aa)

This feature has no annotations

BSR_inoc_67316_3
Thiorhodovibrio sp. 970, Thiorhodovibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1061..4975)
DNA (3915bp) protein (1305aa)
hypothetical protein n=1 Tax=Methylomonas sp. MK1 RepID=UPI00037DFB82
Type I restriction-modification system methyltransferase subunit {ECO:0000313|EMBL:EIC22493.1}; TaxID=631362 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiorhodovibrio.;" source="Thiorhodovibrio sp. 970.;"
type II restriction enzyme, methylase
BSR_inoc_67316_4
Allochromatium vinosum, Allochromatium, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5154..7118)
DNA (1965bp) protein (655aa)
hypothetical protein n=1 Tax=Methylovulum miyakonense RepID=UPI00036B327B
PAS/PAC sensor-containing diguanylate cyclase
Diguanylate cyclase with PAS/PAC sensor {ECO:0000313|EMBL:ADC61417.1}; TaxID=572477 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Allochromatium.;" source="Allochromatium vinosum (strain ATCC 17899 / DSM 180 / NBRC 103801 /; NCIMB 10441 / D) (Chromatium vinosum).;"
BSR_inoc_67316_5
BJP_IG2102_Gammaproteobacteria_62_140, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7105..7587)
DNA (483bp) protein (161aa)
CMP/dCMP deaminase, zinc-binding protein n=1 Tax=Methylobacter tundripaludum SV96 RepID=G3J0S1_9GAMM
cdd; cytosine deaminase
Tax=BJP_IG2102_Gammaproteobacteria_62_140
BSR_inoc_67316_6
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7622..9025)
DNA (1404bp) protein (468aa)
Glutamate--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00022}; EC=6.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00022};; Glutamyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00022}; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
Glutamate--tRNA ligase n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4DD14_9GAMM
gltX; glutaminyl-tRNA synthetase
BSR_inoc_67316_7
Sulfurimonas gotlandica, Sulfurimonas, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

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comp(9100..10311)
DNA (1212bp) protein (404aa)
Fic family protein n=1 Tax=Sulfurimonas gotlandica GD1 RepID=B6BHL3_9HELI
Putative cAMP-induced filamentation protein Fic {ECO:0000313|EMBL:EHP30011.1}; TaxID=929558 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Helicobacteraceae; Sulfurimonas.;" source="Sulfurimonas gotlandica (strain DSM 19862 / JCM 16533 / GD1).;"
filamentation induced by cAMP protein fic
BSR_inoc_67316_8
Thiomicrospira crunogena, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10609..11460)
DNA (852bp) protein (284aa)
Putative uncharacterized protein n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31F85_THICR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABB42188.1}; TaxID=317025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thiomicrospira.;" source="Thiomicrospira crunogena (strain XCL-2).;"
BSR_inoc_67316_9
Thiomicrospira crunogena, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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11792..12604
DNA (813bp) protein (271aa)
ATP-binding cassette (ABC) superfamily transporter, ATPase component n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31JP4_THICR
ABC transporter
ATP-binding cassette (ABC) superfamily transporter, ATPase component {ECO:0000313|EMBL:ABB40629.1}; TaxID=317025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thiomicrospira.;" source="Thiomicrospira crunogena (strain XCL-2).;"
BSR_inoc_67316_10
Thiomicrospira crunogena, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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12625..13869
DNA (1245bp) protein (415aa)
ATP-binding cassette (ABC) superfamily transporter, solute-binding component n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31JP3_THICR
sulfonate ABC transporter periplasmic sulfonate-binding protein
ATP-binding cassette (ABC) superfamily transporter, solute-binding component {ECO:0000313|EMBL:ABB40630.1}; TaxID=317025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thiomicrospira.;" source="Thiomicrospira crunogena (strain XCL-2).;"
BSR_inoc_67316_11
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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13866..14702
DNA (837bp) protein (279aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4DD17_9GAMM
nitrate ABC transporter permease
Nitrate ABC transporter permease {ECO:0000313|EMBL:AHF01538.1}; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
BSR_inoc_67316_12
unknown

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comp(14772..14984)
DNA (213bp) protein (71aa)
BSR_inoc_67316_13
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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15023..16663
DNA (1641bp) protein (547aa)
Transcriptional regulator, NifA subfamily, Fis Family n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4DD18_9GAMM
hydrogenase
Hydrogenase {ECO:0000313|EMBL:AHF01539.1}; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
BSR_inoc_67316_14

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comp(16781..17746)
DNA (966bp) protein (322aa)
Transposase n=1 Tax=Halomonas sp. A3H3 RepID=T2LBV8_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KKN86717.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
transposase
BSR_inoc_67316_15
Shewanella sp. YQH10, Shewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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17922..18155
DNA (234bp) protein (78aa)
Virulence factor n=1 Tax=Vibrio coralliilyticus OCN008 RepID=U0ETZ8_9VIBR
Uncharacterized protein {ECO:0000313|EMBL:KFZ36832.1}; TaxID=1515746 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella.;" source="Shewanella sp. YQH10.;"
virulence factor
BSR_inoc_67316_16
Vibrio coralliilyticus, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

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18118..18570
DNA (453bp) protein (151aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; TaxID=1384040 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" source="Vibrio coralliilyticus OCN008.;"
Ribonuclease VapC n=1 Tax=Vibrio coralliilyticus OCN008 RepID=U0F3F4_9VIBR
VagD family protein
BSR_inoc_67316_17
Candidatus Magnetoovum chiemensis, Candidatus Magnetoovum, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

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18850..19038
DNA (189bp) protein (63aa)
Type II restriction enzyme {ECO:0000313|EMBL:KJR40892.1}; TaxID=1609970 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Candidatus Magnetoovum.;" source="Candidatus Magnetoovum chiemensis.;"
Displaying 17 items

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