ggKbase home page

BSR_inoc_29496

Search features with annotation key words

Displaying items 181-210 of 309 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BSR_inoc_29496_178
Cellvibrio japonicus, Cellvibrio, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

169761..170660
DNA (900bp) protein (300aa)
Glutamyl-Q tRNA(Asp) synthetase {ECO:0000256|HAMAP-Rule:MF_01428, ECO:0000256|SAAS:SAAS00018238}; Short=Glu-Q-RSs {ECO:0000256|HAMAP-Rule:MF_01428};; EC=6.1.1.- {ECO:0000256|HAMAP-Rule:MF_01428, ECO:0000256|SAAS:SAAS00018222};; TaxID=498211 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Cellvibrio.;" source="Cellvibrio japonicus (strain Ueda107) (Pseudomonas fluorescens subsp.; cellulosa).;"
hypothetical protein n=1 Tax=Marinobacterium rhizophilum RepID=UPI000363FD59
glutamyl- and glutaminyl-tRNA synthetase
BSR_inoc_29496_179
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

170657..172237
DNA (1581bp) protein (527aa)
Putative uncharacterized protein n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4DB24_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHF01299.1}; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
BSR_inoc_29496_180
Thiomicrospira crunogena, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

172291..172866
DNA (576bp) protein (192aa)
hypothetical protein n=1 Tax=Thiomicrospira halophila RepID=UPI000370C451
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABB41840.1}; Flags: Precursor;; TaxID=317025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thiomicrospira.;" source="Thiomicrospira crunogena (strain XCL-2).;"
BSR_inoc_29496_181
Thiomicrospira crunogena, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

172894..173115
DNA (222bp) protein (74aa)
Putative uncharacterized protein n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31G82_THICR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABB41841.1}; TaxID=317025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thiomicrospira.;" source="Thiomicrospira crunogena (strain XCL-2).;"
BSR_inoc_29496_182
Hydrogenovibrio marinus, Hydrogenovibrio, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(173119..174474)
DNA (1356bp) protein (452aa)
hypothetical protein n=1 Tax=Thiomicrospira halophila RepID=UPI0003779E20
Uncharacterized protein {ECO:0000313|EMBL:KDN96705.1}; TaxID=28885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Hydrogenovibrio.;" source="Hydrogenovibrio marinus.;"
putative Diguanylate cyclase yddV
BSR_inoc_29496_183
Tolumonas auensis, Tolumonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(174471..177536)
DNA (3066bp) protein (1022aa)
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Tolumonas auensis (strain DSM 9187 / TA4) RepID=C4L9X9_TOLAT
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) {ECO:0000313|EMBL:ACQ92108.1}; TaxID=595494 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Tolumonas.;" source="Tolumonas auensis (strain DSM 9187 / TA4).;"
BSR_inoc_29496_184
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(177756..180806)
DNA (3051bp) protein (1017aa)
hypothetical protein n=1 Tax=Methylomonas sp. MK1 RepID=UPI00037E3163
Putative Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) {ECO:0000313|EMBL:CDH43359.1}; TaxID=1400861 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Contendobacter.;" source="Candidatus Contendobacter odensis Run_B_J11.;"
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
BSR_inoc_29496_185
Thioalkalimicrobium cyclicum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(181566..182201)
DNA (636bp) protein (212aa)
Uncharacterized protein n=1 Tax=Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1) RepID=F6D8T1_THICA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEG31931.1}; TaxID=717773 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1).;"
BSR_inoc_29496_186
Thiomicrospira crunogena, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(182346..183461)
DNA (1116bp) protein (372aa)
hypothetical protein n=1 Tax=Thiomicrospira arctica RepID=UPI000366F144
ATPase-like ATP-binding protein
Uncharacterized protein {ECO:0000313|EMBL:ABB41067.1}; TaxID=317025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thiomicrospira.;" source="Thiomicrospira crunogena (strain XCL-2).;"
BSR_inoc_29496_187
Thiomicrospira crunogena, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(183464..184114)
DNA (651bp) protein (217aa)
hypothetical protein n=1 Tax=Thiomicrospira arctica RepID=UPI00036AB3EE
Fis family transcriptional regulator
Two component transcriptional regulator, Fis family {ECO:0000313|EMBL:ABB41066.1}; TaxID=317025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thiomicrospira.;" source="Thiomicrospira crunogena (strain XCL-2).;"
BSR_inoc_29496_188
unknown

Not on your lists

comp(184118..184585)
DNA (468bp) protein (156aa)

This feature has no annotations

BSR_inoc_29496_189
unknown

Not on your lists

comp(184668..185315)
DNA (648bp) protein (216aa)

This feature has no annotations

BSR_inoc_29496_190
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(185305..186867)
DNA (1563bp) protein (521aa)
hypothetical protein n=1 Tax=Thiomicrospira arctica RepID=UPI0003751322
Tax=CG_Thiomicrospira_01
BSR_inoc_29496_191
Hydrogenovibrio marinus, Hydrogenovibrio, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(186881..188086)
DNA (1206bp) protein (402aa)
hypothetical protein n=1 Tax=Thiomicrospira arctica RepID=UPI000380A801
Type II secretion system protein {ECO:0000313|EMBL:KDN95569.1}; TaxID=28885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Hydrogenovibrio.;" source="Hydrogenovibrio marinus.;"
type II secretion system protein
BSR_inoc_29496_192
Hydrogenovibrio marinus, Hydrogenovibrio, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(188097..189782)
DNA (1686bp) protein (562aa)
secretion system protein E n=1 Tax=Thiomicrospira halophila RepID=UPI000378FA9B
Secretion system protein E {ECO:0000313|EMBL:KDN95570.1}; TaxID=28885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Hydrogenovibrio.;" source="Hydrogenovibrio marinus.;"
type II secretion system protein E
BSR_inoc_29496_193
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(189784..191655)
DNA (1872bp) protein (624aa)
Uncharacterized protein n=1 Tax=Janthinobacterium sp. HH01 RepID=L9P9D2_9BURK
tetratricopeptide repeat family protein
Tax=CG_Thiomicrospira_01
BSR_inoc_29496_194
Janthinobacterium lividum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(191652..193514)
DNA (1863bp) protein (621aa)
hypothetical protein n=1 Tax=Thiomicrospira halophila RepID=UPI00036145C3
general secretion pathway protein D
General secretion pathway protein D {ECO:0000313|EMBL:EZP36545.1}; TaxID=29581 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium lividum.;"
BSR_inoc_29496_195
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(193511..194986)
DNA (1476bp) protein (492aa)
Type II secretory pathway, component ExeA n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31HZ0_THICR
ATPase
Tax=CG_Thiomicrospira_01
BSR_inoc_29496_196
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(195399..197159)
DNA (1761bp) protein (587aa)
Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692}; EC=1.8.1.4 {ECO:0000256|RuleBase:RU003692};; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
Dihydrolipoamide dehydrogenase n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4DB48_9GAMM
dihydrolipoamide dehydrogenase
BSR_inoc_29496_197
Thioalkalimicrobium cyclicum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(197174..198517)
DNA (1344bp) protein (448aa)
dihydrolipoyllysine-residue acetyltransferase (EC:2.3.1.12)
Acetyltransferase component of pyruvate dehydrogenase complex {ECO:0000256|RuleBase:RU361137}; EC=2.3.1.12 {ECO:0000256|RuleBase:RU361137};; TaxID=717773 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1).;"
Dihydrolipoyllysine-residue acetyltransferase n=1 Tax=Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1) RepID=F6DC86_THICA
BSR_inoc_29496_198
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(198582..201242)
DNA (2661bp) protein (887aa)
Pyruvate dehydrogenase E1 component {ECO:0000256|PIRNR:PIRNR000156}; EC=1.2.4.1 {ECO:0000256|PIRNR:PIRNR000156};; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
Pyruvate dehydrogenase E1 component n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4DB50_9GAMM
aceE; pyruvate dehydrogenase
BSR_inoc_29496_199
Thiomicrospira crunogena, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(201555..202052)
DNA (498bp) protein (166aa)
RNA pyrophosphohydrolase {ECO:0000255|HAMAP-Rule:MF_00298}; EC=3.6.1.- {ECO:0000255|HAMAP-Rule:MF_00298};; (Di)nucleoside polyphosphate hydrolase {ECO:0000255|HAMAP-Rule:MF_00298}; TaxID=317025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thiomicrospira.;" source="Thiomicrospira crunogena (strain XCL-2).;"
RNA pyrophosphohydrolase n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=RPPH_THICR
NUDIX hydrolase
BSR_inoc_29496_200
Thiomicrospira crunogena, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

202291..202947
DNA (657bp) protein (219aa)
HAD-superfamily hydrolase, subfamily IB (PSPase-like) n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31GX9_THICR
HAD family hydrolase
HAD-superfamily hydrolase, subfamily IB (PSPase-like) {ECO:0000313|EMBL:ABB41594.1}; TaxID=317025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thiomicrospira.;" source="Thiomicrospira crunogena (strain XCL-2).;"
BSR_inoc_29496_201
Hydrogenovibrio marinus, Hydrogenovibrio, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(202956..203336)
DNA (381bp) protein (127aa)
Holo-[acyl-carrier-protein] synthase {ECO:0000256|HAMAP-Rule:MF_00101, ECO:0000256|SAAS:SAAS00237208}; Short=Holo-ACP synthase {ECO:0000256|HAMAP-Rule:MF_00101};; EC=2.7.8.7 {ECO:0000256|HAMAP-Rule:MF_00101};; 4'-phosphopantetheinyl transferase AcpS {ECO:0000256|HAMAP-Rule:MF_00101}; TaxID=28885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Hydrogenovibrio.;" source="Hydrogenovibrio marinus.;"
hypothetical protein n=1 Tax=Thiomicrospira arctica RepID=UPI00036C1A4C
holo-ACP synthase
BSR_inoc_29496_202
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(203338..204087)
DNA (750bp) protein (250aa)
Pyridoxine 5'-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00279, ECO:0000256|SAAS:SAAS00088558}; Short=PNP synthase {ECO:0000256|HAMAP-Rule:MF_00279};; EC=2.6.99.2 {ECO:0000256|HAMAP-Rule:MF_00279, ECO:0000256|SAAS:SAAS00088588};; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
Pyridoxine 5'-phosphate synthase n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4D7B5_9GAMM
pyridoxine 5'-phosphate synthase
BSR_inoc_29496_203
Thiomicrospira crunogena, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(204087..204803)
DNA (717bp) protein (239aa)
DNA repair protein RecO n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31HP1_THICR
DNA repair protein RecO
DNA repair protein RecO {ECO:0000256|HAMAP-Rule:MF_00201, ECO:0000256|SAAS:SAAS00018750}; Recombination protein O {ECO:0000256|HAMAP-Rule:MF_00201}; TaxID=317025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thiomicrospira.;" source="Thiomicrospira crunogena (strain XCL-2).;"
BSR_inoc_29496_204
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(204835..205773)
DNA (939bp) protein (313aa)
GTPase Era n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4D7B7_9GAMM
GTPase Era
GTPase Era {ECO:0000256|HAMAP-Rule:MF_00367, ECO:0000256|SAAS:SAAS00085723}; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
BSR_inoc_29496_205
Thioalkalimicrobium cyclicum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(205770..206465)
DNA (696bp) protein (232aa)
ribonuclease 3 (EC:3.1.26.3)
Ribonuclease 3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231299}; EC=3.1.26.3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231445};; Ribonuclease 3; Ribonuclease III {ECO:0000256|HAMAP-Rule:MF_00104}; TaxID=717773 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1).;"
Ribonuclease 3 n=1 Tax=Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1) RepID=F6DCS1_THICA
BSR_inoc_29496_206
Thioalkalimicrobium cyclicum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(206465..207235)
DNA (771bp) protein (257aa)
signal peptidase I (EC:3.4.21.89)
Signal peptidase I {ECO:0000256|RuleBase:RU003993}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU003993};; TaxID=717773 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1).;"
Signal peptidase I n=1 Tax=Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1) RepID=F6DCS2_THICA
BSR_inoc_29496_207
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(207232..209043)
DNA (1812bp) protein (604aa)
Elongation factor 4 {ECO:0000256|HAMAP-Rule:MF_00071}; Short=EF-4 {ECO:0000256|HAMAP-Rule:MF_00071};; EC=3.6.5.n1 {ECO:0000256|HAMAP-Rule:MF_00071};; Ribosomal back-translocase LepA {ECO:0000256|HAMAP-Rule:MF_00071}; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
Elongation factor 4 n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4D7Q3_9GAMM
elongation factor 4
Displaying items 181-210 of 309 in total

View Taxonomy