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BSR_inoc_29496

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Displaying items 211-240 of 309 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BSR_inoc_29496_208
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(209204..210598)
DNA (1395bp) protein (465aa)
Protease Do n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4D7Q4_9GAMM
serine peptidase
Serine peptidase {ECO:0000313|EMBL:AHF01138.1}; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
BSR_inoc_29496_209
Thiomicrospira crunogena, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(210595..211047)
DNA (453bp) protein (151aa)
Positive regulator of sigma(E), RseC/MucC n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31HP7_THICR
positive regulator of sigma(E), RseC/MucC
Positive regulator of sigma(E), RseC/MucC {ECO:0000313|EMBL:ABB41326.1}; TaxID=317025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thiomicrospira.;" source="Thiomicrospira crunogena (strain XCL-2).;"
BSR_inoc_29496_210
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

211154..212755
DNA (1602bp) protein (534aa)
L-aspartate oxidase (EC:1.4.3.16)
L-aspartate oxidase {ECO:0000256|RuleBase:RU362049}; EC=1.4.3.16 {ECO:0000256|RuleBase:RU362049};; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
L-aspartate oxidase n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4D7Q6_9GAMM
BSR_inoc_29496_211
Hydrogenovibrio marinus, Hydrogenovibrio, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(212752..213285)
DNA (534bp) protein (178aa)
hypothetical protein n=1 Tax=Thiomicrospira arctica RepID=UPI0003737561
Chemotaxis protein CheW {ECO:0000313|EMBL:KDN94778.1}; TaxID=28885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Hydrogenovibrio.;" source="Hydrogenovibrio marinus.;"
chemotaxis protein CheW
BSR_inoc_29496_212
Thioalkalimicrobium cyclicum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

213455..214522
DNA (1068bp) protein (356aa)
Folate-binding protein YgfZ n=1 Tax=Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1) RepID=F6DD42_THICA
folate-binding protein YgfZ
Folate-binding protein YgfZ {ECO:0000313|EMBL:AEG31778.1}; TaxID=717773 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1).;"
BSR_inoc_29496_213
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(214546..216075)
DNA (1530bp) protein (510aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
Superfamily I DNA/RNA helicase-like protein n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4D821_9GAMM
DNA helicase
BSR_inoc_29496_214
Thioalkalimicrobium cyclicum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(216311..217759)
DNA (1449bp) protein (483aa)
Na+/solute symporter n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4D822_9GAMM
sodium:solute symporter
Na+/solute symporter {ECO:0000313|EMBL:AEG31780.1}; TaxID=717773 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1).;"
BSR_inoc_29496_trna_2
unknown

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comp(217987..218059)
DNA (73bp)
transferRNA Lys
BSR_inoc_29496_trna_1
unknown

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comp(218203..218275)
DNA (73bp)
transferRNA Lys
BSR_inoc_29496_215
Thiomicrospira crunogena, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(218414..219091)
DNA (678bp) protein (226aa)
7-cyano-7-deazaguanine synthase {ECO:0000255|HAMAP-Rule:MF_01633}; EC=6.3.4.20 {ECO:0000255|HAMAP-Rule:MF_01633};; 7-cyano-7-carbaguanine synthase {ECO:0000255|HAMAP-Rule:MF_01633}; PreQ(0) synthase {ECO:0000255|HAMAP-Rule:MF_01633}; Queuosine biosynthesis protein QueC {ECO:0000255|HAMAP-Rule:MF_01633}; TaxID=317025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thiomicrospira.;" source="Thiomicrospira crunogena (strain XCL-2).;"
7-cyano-7-deazaguanine synthase n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=QUEC_THICR
exoenzyme S synthesis protein B
BSR_inoc_29496_216
Thioalkalimicrobium cyclicum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(219094..219843)
DNA (750bp) protein (250aa)
Tol-pal system protein YbgF n=1 Tax=Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1) RepID=F6D8D1_THICA
tol-pal system protein YbgF
Tol-pal system protein YbgF {ECO:0000313|EMBL:AEG31782.1}; Flags: Precursor;; TaxID=717773 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1).;"
BSR_inoc_29496_217
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(219860..220456)
DNA (597bp) protein (199aa)
OmpA/MotB domain protein n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4D825_9GAMM
flagellar motor protein MotB
Flagellar motor protein MotB {ECO:0000313|EMBL:AHF01039.1}; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
BSR_inoc_29496_218
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(220598..221911)
DNA (1314bp) protein (438aa)
Protein TolB n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4D826_9GAMM
translocation protein TolB
Protein TolB {ECO:0000256|HAMAP-Rule:MF_00671}; Flags: Precursor;; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
BSR_inoc_29496_219
Thiomicrospira crunogena, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(221946..223055)
DNA (1110bp) protein (370aa)
TolA protein n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31H80_THICR
hypothetical protein
TolA protein {ECO:0000313|EMBL:ABB41493.1}; TaxID=317025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thiomicrospira.;" source="Thiomicrospira crunogena (strain XCL-2).;"
BSR_inoc_29496_220
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(223055..223504)
DNA (450bp) protein (150aa)
hypothetical protein n=1 Tax=Thiomicrospira arctica RepID=UPI00035F0FBF
biopolymer transportern ExbD
Biopolymer transportern ExbD {ECO:0000313|EMBL:AHF01036.1}; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
BSR_inoc_29496_221
Thioalkalimicrobium cyclicum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(223534..224214)
DNA (681bp) protein (227aa)
Protein TolQ n=1 Tax=Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1) RepID=F6D8D6_THICA
protein TolQ
Protein TolQ {ECO:0000313|EMBL:AEG31787.1}; TaxID=717773 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1).;"
BSR_inoc_29496_222
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(224211..225227)
DNA (1017bp) protein (339aa)
ruvB; Holliday junction DNA helicase RuvB (EC:3.6.1.-)
Holliday junction ATP-dependent DNA helicase RuvB {ECO:0000256|HAMAP-Rule:MF_00016}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00016};; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
Holliday junction ATP-dependent DNA helicase RuvB n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4D830_9GAMM
BSR_inoc_29496_223
Thioalkalimicrobium cyclicum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(225224..225832)
DNA (609bp) protein (203aa)
Holliday junction ATP-dependent DNA helicase RuvA {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058935}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058896};; TaxID=717773 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1).;"
Holliday junction ATP-dependent DNA helicase RuvA n=1 Tax=Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1) RepID=F6D8D8_THICA
Holliday junction ATP-dependent DNA helicase ruvA
BSR_inoc_29496_224
Thioalkalimicrobium cyclicum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(225848..226366)
DNA (519bp) protein (173aa)
Crossover junction endodeoxyribonuclease ruvC (EC:3.1.22.4)
Crossover junction endodeoxyribonuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106335}; EC=3.1.22.4 {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106388};; Holliday junction nuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; Holliday junction resolvase RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; TaxID=717773 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1).;"
Crossover junction endodeoxyribonuclease RuvC n=1 Tax=Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1) RepID=F6D8D9_THICA
BSR_inoc_29496_225
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(226376..227131)
DNA (756bp) protein (252aa)
Probable transcriptional regulatory protein ThiaeDRAFT_0190 n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4D833_9GAMM
hypothetical protein
Probable transcriptional regulatory protein THIAE_03790 {ECO:0000256|HAMAP-Rule:MF_00693}; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
BSR_inoc_29496_226
Thioalkalimicrobium cyclicum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(227165..228244)
DNA (1080bp) protein (360aa)
quinolinate synthetase complex subunit A (EC:2.5.1.72)
Quinolinate synthase {ECO:0000256|SAAS:SAAS00096027}; EC=2.5.1.72 {ECO:0000256|SAAS:SAAS00096027};; TaxID=717773 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1).;"
Quinolinate synthetase complex, A subunit n=1 Tax=Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1) RepID=F6D8E1_THICA
BSR_inoc_29496_227
Thioalkalimicrobium cyclicum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(228257..230041)
DNA (1785bp) protein (595aa)
aspartyl-tRNA synthetase (EC:6.1.1.12)
Aspartyl-tRNA synthetase {ECO:0000313|EMBL:AEG31793.1}; EC=6.1.1.12 {ECO:0000313|EMBL:AEG31793.1};; TaxID=717773 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1).;"
Aspartate--tRNA ligase n=1 Tax=Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1) RepID=F6D8E2_THICA
BSR_inoc_29496_228
Hydrogenovibrio marinus, Hydrogenovibrio, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(230080..230808)
DNA (729bp) protein (243aa)
Putative uncharacterized protein n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31H88_THICR
Membrane protein {ECO:0000313|EMBL:KDN94885.1}; TaxID=28885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Hydrogenovibrio.;" source="Hydrogenovibrio marinus.;"
hypothetical protein
BSR_inoc_29496_229
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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230924..231784
DNA (861bp) protein (287aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Psychromonas ingrahamii (strain 37) RepID=A1SZC7_PSYIN
short-chain dehydrogenase/reductase SDR
Tax=CG_Thiomicrospira_01
BSR_inoc_29496_230
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

231856..232458
DNA (603bp) protein (201aa)
peroxidase n=1 Tax=Thiomicrospira halophila RepID=UPI000374F005
alkyl hydroperoxide reductase
Tax=CG_Thiomicrospira_01
BSR_inoc_29496_231
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

232455..233333
DNA (879bp) protein (293aa)
hypothetical protein n=1 Tax=Thiomicrospira arctica RepID=UPI000377099B
polyprenyl synthetase
Tax=CG_Thiomicrospira_01
BSR_inoc_29496_232
Thiomicrospira crunogena, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

233384..233761
DNA (378bp) protein (126aa)
6-carboxy-5,6,7,8-tetrahydropterin synthase {ECO:0000256|PIRNR:PIRNR006113}; EC=4.-.-.- {ECO:0000256|PIRNR:PIRNR006113};; TaxID=317025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thiomicrospira.;" source="Thiomicrospira crunogena (strain XCL-2).;"
6-carboxy-5,6,7,8-tetrahydropterin synthase n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31FT9_THICR
6-pyruvoyl tetrahydropterin synthase
BSR_inoc_29496_233
Hydrogenovibrio marinus, Hydrogenovibrio, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

233789..234079
DNA (291bp) protein (97aa)
Anti-sigma-factor antagonist (STAS) domain protein n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31FT8_THICR
anti-sigma-factor antagonist domain-containing protein
Anti-sigma-factor antagonist protein {ECO:0000313|EMBL:KDN95365.1}; TaxID=28885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Hydrogenovibrio.;" source="Hydrogenovibrio marinus.;"
BSR_inoc_29496_234
Hydrogenovibrio marinus, Hydrogenovibrio, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

234143..234868
DNA (726bp) protein (242aa)
Type 4 prepilin-like proteins leader peptide-processing enzyme {ECO:0000256|RuleBase:RU003794}; EC=2.1.1.- {ECO:0000256|RuleBase:RU003794};; EC=3.4.23.43 {ECO:0000256|RuleBase:RU003794};; TaxID=28885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Hydrogenovibrio.;" source="Hydrogenovibrio marinus.;"
prepilin peptidase (EC:3.4.23.43)
hypothetical protein n=1 Tax=Thiomicrospira arctica RepID=UPI00036C4D14
BSR_inoc_29496_235
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(234885..235184)
DNA (300bp) protein (100aa)
Putative uncharacterized protein n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4D7C3_9GAMM
PhnO
PhnO {ECO:0000313|EMBL:AHF01023.1}; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
Displaying items 211-240 of 309 in total

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