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BSR_inoc_23480

Search features with annotation key words

Displaying items 1-30 of 118 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BSR_inoc_23480_1
Sedimenticola sp. SIP-G1, Sedimenticola, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(408..716)
DNA (309bp) protein (103aa)
CRISPR-associated endoribonuclease Cas2 n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=CAS2_ACIET
CRISPR-associated protein Cas2 {ECO:0000313|EMBL:AKH21522.1}; TaxID=1543721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Sedimenticola.;" source="Sedimenticola sp. SIP-G1.;"
crispr-associated protein cas2
BSR_inoc_23480_2
Sedimenticola sp. SIP-G1, Sedimenticola, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(737..1657)
DNA (921bp) protein (307aa)
CRISPR-associated endonuclease Cas1 n=1 Tax=Kingella kingae PYKK081 RepID=H8DYT9_9NEIS
Uncharacterized protein {ECO:0000313|EMBL:AKH21523.1}; TaxID=1543721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Sedimenticola.;" source="Sedimenticola sp. SIP-G1.;"
hypothetical protein
BSR_inoc_23480_3
Sedimenticola sp. SIP-G1, Sedimenticola, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1660..4911)
DNA (3252bp) protein (1084aa)
hypothetical protein n=1 Tax=Bordetella sp. FB-8 RepID=UPI00036608D7
Uncharacterized protein {ECO:0000313|EMBL:AKH21524.1}; TaxID=1543721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Sedimenticola.;" source="Sedimenticola sp. SIP-G1.;"
crispr-associated protein, csn1 family
BSR_inoc_23480_4
RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5111..5416)
DNA (306bp) protein (102aa)
Transcriptional regulator protein n=3 Tax=Azotobacter vinelandii RepID=C1DE86_AZOVD
transcriptional regulator protein
Tax=RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated
BSR_inoc_23480_5
Acidithiobacillus ferrooxidans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5413..5565)
DNA (153bp) protein (51aa)
Addiction module killer protein n=2 Tax=Acidithiobacillus RepID=B5ERP4_ACIF5
addiction module killer protein
Addiction module killer protein {ECO:0000313|EMBL:ACH83565.1}; TaxID=380394 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrooxidans (strain ATCC 53993) (Leptospirillum; ferrooxidans (ATCC 53993)).;"
BSR_inoc_23480_6
Thioalkalimicrobium cyclicum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5772..6680)
DNA (909bp) protein (303aa)
Aldose 1-epimerase n=1 Tax=Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1) RepID=F6D924_THICA
aldose-1-epimerase
Aldose 1-epimerase {ECO:0000313|EMBL:AEG30855.1}; TaxID=717773 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1).;"
BSR_inoc_23480_7
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6716..7819)
DNA (1104bp) protein (368aa)
diguanylate cyclase n=1 Tax=Aquaspirillum serpens RepID=UPI0003B3D896
diguanylate cyclase
Tax=CG_Thiomicrospira_01
BSR_inoc_23480_8
Thioalkalimicrobium cyclicum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7949..9028)
DNA (1080bp) protein (360aa)
3-dehydroquinate synthase (EC:4.2.3.4)
3-dehydroquinate synthase {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210858}; EC=4.2.3.4 {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210855};; TaxID=717773 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1).;"
3-dehydroquinate synthase n=1 Tax=Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1) RepID=F6D923_THICA
BSR_inoc_23480_9
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9069..9593)
DNA (525bp) protein (175aa)
aroK; shikimate kinase (EC:2.7.1.71)
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00109};; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
Shikimate kinase n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4D932_9GAMM
BSR_inoc_23480_10
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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9700..10317
DNA (618bp) protein (206aa)
Guanylate kinase {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00021750}; EC=2.7.4.8 {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00036702};; GMP kinase {ECO:0000256|HAMAP-Rule:MF_00328}; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
Guanylate kinase n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4D933_9GAMM
guanylate kinase
BSR_inoc_23480_11
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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10365..11549
DNA (1185bp) protein (395aa)
Glutamine--scyllo-inositol transaminase n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4D934_9GAMM
glutamine--scyllo-inositol aminotransferase
Glutamine--scyllo-inositol aminotransferase {ECO:0000313|EMBL:AHF00423.1}; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
BSR_inoc_23480_12
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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11629..12702
DNA (1074bp) protein (358aa)
Iron-containing alcohol dehydrogenase n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4D935_9GAMM
alcohol dehydrogenase
Alcohol dehydrogenase {ECO:0000313|EMBL:AHF00422.1}; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
BSR_inoc_23480_13
unknown

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comp(12685..12879)
DNA (195bp) protein (65aa)

This feature has no annotations

BSR_inoc_23480_14
Thioalkalimicrobium cyclicum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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12930..13676
DNA (747bp) protein (249aa)
3-deoxy-manno-octulosonate cytidylyltransferase (EC:2.7.7.38)
3-deoxy-manno-octulosonate cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00057, ECO:0000256|SAAS:SAAS00089008}; EC=2.7.7.38 {ECO:0000256|HAMAP-Rule:MF_00057, ECO:0000256|SAAS:SAAS00089008};; CMP-2-keto-3-deoxyoctulosonic acid synthase {ECO:0000256|HAMAP-Rule:MF_00057}; TaxID=717773 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1).;"
3-deoxy-manno-octulosonate cytidylyltransferase n=1 Tax=Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1) RepID=F6D918_THICA
BSR_inoc_23480_15
Thioalkalimicrobium cyclicum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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13685..14908
DNA (1224bp) protein (408aa)
Three-deoxy-D-manno-octulosonic-acid transferase domain-containing protein n=1 Tax=Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1) RepID=F6D917_THICA
tjhree-deoxy-D-manno-octulosonic-acid transferase domain-containing protein
Three-deoxy-D-manno-octulosonic-acid transferase domain-containing protein {ECO:0000313|EMBL:AEG30848.1}; TaxID=717773 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1).;"
BSR_inoc_23480_16
Alcanivorax jadensis, Alcanivorax, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(14980..15633)
DNA (654bp) protein (218aa)
Peroxiredoxin {ECO:0000256|HAMAP-Rule:MF_00401}; EC=1.11.1.15 {ECO:0000256|HAMAP-Rule:MF_00401};; TaxID=1177181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Alcanivorax.;" source="Alcanivorax jadensis T9.;"
hypothetical protein n=1 Tax=Thiomicrospira halophila RepID=UPI000376838A
ahpC_[C]; Alkyl hydroperoxide reductase subunit C-like protein
BSR_inoc_23480_17
Thioalkalimicrobium cyclicum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(15960..17357)
DNA (1398bp) protein (466aa)
argininosuccinate lyase (EC:4.3.2.1)
Argininosuccinate lyase {ECO:0000256|HAMAP-Rule:MF_00006, ECO:0000256|SAAS:SAAS00211019}; Short=ASAL {ECO:0000256|HAMAP-Rule:MF_00006};; EC=4.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00006, ECO:0000256|SAAS:SAAS00211017};; Arginosuccinase {ECO:0000256|HAMAP-Rule:MF_00006}; TaxID=717773 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1).;"
Argininosuccinate lyase n=1 Tax=Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1) RepID=F6DBI8_THICA
BSR_inoc_23480_18
Thioalkalimicrobium cyclicum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17366..17890)
DNA (525bp) protein (175aa)
Uncharacterized protein n=1 Tax=Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1) RepID=F6DBI7_THICA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEG32389.1}; Flags: Precursor;; TaxID=717773 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1).;"
BSR_inoc_23480_19
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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17991..18917
DNA (927bp) protein (309aa)
Porphobilinogen deaminase {ECO:0000256|HAMAP-Rule:MF_00260}; Short=PBG {ECO:0000256|HAMAP-Rule:MF_00260};; EC=2.5.1.61 {ECO:0000256|HAMAP-Rule:MF_00260};; Hydroxymethylbilane synthase {ECO:0000256|HAMAP-Rule:MF_00260}; Pre-uroporphyrinogen synthase {ECO:0000256|HAMAP-Rule:MF_00260}; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
Porphobilinogen deaminase n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4DA99_9GAMM
porphobilinogen deaminase
BSR_inoc_23480_20
Thiomicrospira crunogena, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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18938..19678
DNA (741bp) protein (247aa)
Uroporphyrinogen-III synthase {ECO:0000313|EMBL:ABB40709.1}; EC=4.2.1.75 {ECO:0000313|EMBL:ABB40709.1};; TaxID=317025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thiomicrospira.;" source="Thiomicrospira crunogena (strain XCL-2).;"
hypothetical protein n=1 Tax=Thiomicrospira arctica RepID=UPI00035F5ACE
uroporphyrinogen III methylase
BSR_inoc_23480_21
Thioalkalimicrobium cyclicum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19671..20528
DNA (858bp) protein (286aa)
Uncharacterized protein n=1 Tax=Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1) RepID=F6DBI4_THICA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEG32386.1}; Flags: Precursor;; TaxID=717773 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1).;"
BSR_inoc_23480_22
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20525..21700
DNA (1176bp) protein (392aa)
HemY domain protein n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4DAA2_9GAMM
heme biosynthesis protein HemY
Heme biosynthesis protein HemY {ECO:0000313|EMBL:AHF02104.1}; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
BSR_inoc_23480_23
Pseudomonas alcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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21733..22554
DNA (822bp) protein (274aa)
Uncharacterized protein n=1 Tax=Pseudomonas alcaligenes OT 69 RepID=U3H8I2_PSEAC
Uncharacterized protein {ECO:0000313|EMBL:EQM67065.1}; TaxID=1333854 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas alcaligenes OT 69.;"
baeR; Transcriptional regulatory protein BaeR
BSR_inoc_23480_24
GWA2_Gallionellales_54_124_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

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22545..25133
DNA (2589bp) protein (863aa)
putative Histidine kinase (EC:2.7.13.3)
Putative Histidine kinase n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F685_9PROT
Tax=GWA2_Gallionellales_54_124_curated
BSR_inoc_23480_25
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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25371..27347
DNA (1977bp) protein (659aa)
Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F5P1_9PROT
Diguanylate cyclase with PAS/PAC sensor
Diguanylate cyclase with PAS/PAC sensor {ECO:0000313|EMBL:CDK99798.1}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense MSR-1 v2.;"
BSR_inoc_23480_26
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27412..27621
DNA (210bp) protein (70aa)
AAA-ATPase-like protein n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4DC78_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHF01784.1}; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
BSR_inoc_23480_trna_1
unknown

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27627..27699
DNA (73bp)
transferRNA Phe
BSR_inoc_23480_trna_2
unknown

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27743..27823
DNA (81bp)
transferRNA Leu
BSR_inoc_23480_27
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28173..29138
DNA (966bp) protein (322aa)
ATPase associated with various cellular activities AAA_3 n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4DA48_9GAMM
ATPase AAA
ATPase AAA {ECO:0000313|EMBL:AHF02152.1}; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
BSR_inoc_23480_28
Thioalkalimicrobium cyclicum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29141..30049
DNA (909bp) protein (303aa)
Uncharacterized protein n=1 Tax=Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1) RepID=F6DBM7_THICA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEG32429.1}; TaxID=717773 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1).;"
Displaying items 1-30 of 118 in total

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