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BSR_inoc_157159

Search features with annotation key words

Displaying items 31-60 of 62 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BSR_inoc_157159_31
Thiomicrospira crunogena, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(38655..40301)
DNA (1647bp) protein (549aa)
2-isopropylmalate synthase (EC:2.3.3.13)
2-isopropylmalate synthase 2 {ECO:0000255|HAMAP-Rule:MF_00572}; EC=2.3.3.13 {ECO:0000255|HAMAP-Rule:MF_00572};; Alpha-IPM synthase 2 {ECO:0000255|HAMAP-Rule:MF_00572}; Alpha-isopropylmalate synthase 2 {ECO:0000255|HAMAP-Rule:MF_00572}; TaxID=317025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thiomicrospira.;" source="Thiomicrospira crunogena (strain XCL-2).;"
2-isopropylmalate synthase 2 n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=LEU12_THICR
BSR_inoc_157159_32
Thiomicrospira crunogena, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

40550..41014
DNA (465bp) protein (155aa)
Transcriptional regulator, AsnC family n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31EF6_THICR
AsnC family transcriptional regulator
Transcriptional regulator, AsnC family {ECO:0000313|EMBL:ABB42467.1}; TaxID=317025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thiomicrospira.;" source="Thiomicrospira crunogena (strain XCL-2).;"
BSR_inoc_157159_33
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

41040..42188
DNA (1149bp) protein (383aa)
Ribonuclease D n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31F99_THICR
3'-5' exonuclease
Tax=CG_Thiomicrospira_01
BSR_inoc_157159_34
Thiomicrospira crunogena, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

42253..43530
DNA (1278bp) protein (426aa)
6-phosphofructokinase (EC:2.7.1.11)
Pyrophosphate--fructose 6-phosphate 1-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_01978}; EC=2.7.1.90 {ECO:0000256|HAMAP-Rule:MF_01978};; 6-phosphofructokinase, pyrophosphate dependent {ECO:0000256|HAMAP-Rule:MF_01978}; PPi-dependent phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_01978}; Pyrophosphate-dependent 6-phosphofructose-1-kinase {ECO:0000256|HAMAP-Rule:MF_01978}; TaxID=317025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thiomicrospira.;" source="Thiomicrospira crunogena (strain XCL-2).;"
6-phosphofructokinase n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31F98_THICR
BSR_inoc_157159_35
unknown

Not on your lists

comp(43614..43922)
DNA (309bp) protein (103aa)

This feature has no annotations

BSR_inoc_157159_36
Hydrogenovibrio marinus, Hydrogenovibrio, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(43948..44736)
DNA (789bp) protein (263aa)
Putative uncharacterized protein n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31FJ9_THICR
Uncharacterized protein {ECO:0000313|EMBL:KDN95516.1}; TaxID=28885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Hydrogenovibrio.;" source="Hydrogenovibrio marinus.;"
hypothetical protein
BSR_inoc_157159_37
unknown

Not on your lists

comp(44753..45073)
DNA (321bp) protein (107aa)

This feature has no annotations

BSR_inoc_157159_38
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(45082..46197)
DNA (1116bp) protein (372aa)
hypothetical protein n=1 Tax=Thiomicrospira arctica RepID=UPI00037D85FA
hypothetical protein
Tax=CG_Thiomicrospira_01
BSR_inoc_157159_39
Thiomicrospira crunogena, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(46241..47695)
DNA (1455bp) protein (485aa)
Putative uncharacterized protein n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31FJ7_THICR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABB42076.1}; Flags: Precursor;; TaxID=317025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thiomicrospira.;" source="Thiomicrospira crunogena (strain XCL-2).;"
BSR_inoc_157159_40
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(47661..50300)
DNA (2640bp) protein (880aa)
hypothetical protein n=1 Tax=Thiomicrospira arctica RepID=UPI00037D0A26
aminopeptidase N
Aminopeptidase N {ECO:0000313|EMBL:AHF00690.1}; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
BSR_inoc_157159_41
Thiomicrospira crunogena, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(50589..51122)
DNA (534bp) protein (178aa)
OmpA/MotB family protein n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31FJ5_THICR
OmpA/MotB
OmpA/MotB family protein {ECO:0000313|EMBL:ABB42078.1}; Flags: Precursor;; TaxID=317025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thiomicrospira.;" source="Thiomicrospira crunogena (strain XCL-2).;"
BSR_inoc_157159_42
Hydrogenovibrio marinus, Hydrogenovibrio, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(51707..52465)
DNA (759bp) protein (253aa)
hypothetical protein n=1 Tax=Thiomicrospira arctica RepID=UPI00037B1064
Crp/Fnr family transcriptional regulator {ECO:0000313|EMBL:KDN95523.1}; TaxID=28885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Hydrogenovibrio.;" source="Hydrogenovibrio marinus.;"
Crp/Fnr family transcriptional regulator
BSR_inoc_157159_43
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

53013..54218
DNA (1206bp) protein (402aa)
Ketohexokinase n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4D9Y4_9GAMM
carbohydrate kinase
Carbohydrate kinase {ECO:0000313|EMBL:AHF00803.1}; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
BSR_inoc_157159_44
Thiomicrospira crunogena, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(54273..55001)
DNA (729bp) protein (243aa)
23S rRNA (guanosine-2'-O-)-methyltransferase RlmB {ECO:0000256|HAMAP-Rule:MF_01887}; EC=2.1.1.185 {ECO:0000256|HAMAP-Rule:MF_01887};; 23S rRNA (guanosine2251 2'-O)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01887}; 23S rRNA Gm2251 2'-O-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01887}; TaxID=317025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thiomicrospira.;" source="Thiomicrospira crunogena (strain XCL-2).;"
23S rRNA (guanosine-2'-O-)-methyltransferase RlmB n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31FJ2_THICR
RNA methyltransferase TrmH, group 3
BSR_inoc_157159_45
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(54998..57310)
DNA (2313bp) protein (771aa)
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
Ribonuclease R n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4D9Y2_9GAMM
exoribonuclease R
BSR_inoc_157159_46
Thiomicrospira crunogena, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(57520..58893)
DNA (1374bp) protein (458aa)
dihydrolipoamide dehydrogenase (EC:1.8.1.4)
FAD-dependent pyridine nucleotide-disulphide oxidoreductase n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31FJ0_THICR
FAD-dependent pyridine nucleotide-disulphide oxidoreductase {ECO:0000313|EMBL:ABB42083.1}; TaxID=317025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thiomicrospira.;" source="Thiomicrospira crunogena (strain XCL-2).;"
BSR_inoc_157159_47
Thioalkalimicrobium cyclicum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

59051..60535
DNA (1485bp) protein (495aa)
Peptidoglycan lytic exotransglycosylase {ECO:0000256|SAAS:SAAS00166192}; EC=4.2.2.n1 {ECO:0000256|SAAS:SAAS00166192};; TaxID=717773 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1).;"
Lytic transglycosylase catalytic n=1 Tax=Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1) RepID=F6D904_THICA
lytic transglycosylase catalytic subunit
BSR_inoc_157159_48
Hydrogenovibrio marinus, Hydrogenovibrio, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(60501..61949)
DNA (1449bp) protein (483aa)
tRNA sulfurtransferase {ECO:0000256|HAMAP-Rule:MF_00021, ECO:0000256|SAAS:SAAS00022963}; EC=2.8.1.4 {ECO:0000256|HAMAP-Rule:MF_00021, ECO:0000256|SAAS:SAAS00094270};; Sulfur carrier protein ThiS sulfurtransferase {ECO:0000256|HAMAP-Rule:MF_00021}; Thiamine biosynthesis protein ThiI {ECO:0000256|HAMAP-Rule:MF_00021}; tRNA 4-thiouridine synthase {ECO:0000256|HAMAP-Rule:MF_00021}; TaxID=28885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Hydrogenovibrio.;" source="Hydrogenovibrio marinus.;"
tRNA sulfurtransferase n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31FI8_THICR
thiamine biosynthesis protein ThiI
BSR_inoc_157159_49
Thioalkalimicrobium cyclicum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

62202..63176
DNA (975bp) protein (325aa)
fructose-1,6-bisphosphatase class 1 (EC:3.1.3.11)
Fructose-1,6-bisphosphatase class 1 {ECO:0000256|HAMAP-Rule:MF_01855}; Short=FBPase class 1 {ECO:0000256|HAMAP-Rule:MF_01855};; EC=3.1.3.11 {ECO:0000256|HAMAP-Rule:MF_01855};; D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1 {ECO:0000256|HAMAP-Rule:MF_01855}; TaxID=717773 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1).;"
Fructose-1,6-bisphosphatase class 1 n=1 Tax=Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1) RepID=F6D978_THICA
BSR_inoc_157159_50
Thioalkalimicrobium cyclicum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

63252..63776
DNA (525bp) protein (175aa)
inorganic pyrophosphatase (EC:3.6.1.1)
Inorganic pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_00209}; EC=3.6.1.1 {ECO:0000256|HAMAP-Rule:MF_00209};; Pyrophosphate phospho-hydrolase {ECO:0000256|HAMAP-Rule:MF_00209}; TaxID=717773 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1).;"
Inorganic pyrophosphatase n=1 Tax=Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1) RepID=F6D979_THICA
BSR_inoc_157159_51
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

63936..66740
DNA (2805bp) protein (935aa)
Phosphoenolpyruvate carboxylase {ECO:0000256|HAMAP-Rule:MF_00595, ECO:0000256|SAAS:SAAS00018769}; Short=PEPC {ECO:0000256|HAMAP-Rule:MF_00595};; Short=PEPCase {ECO:0000256|HAMAP-Rule:MF_00595};; EC=4.1.1.31 {ECO:0000256|HAMAP-Rule:MF_00595, ECO:0000256|SAAS:SAAS00018769};; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
Phosphoenolpyruvate carboxylase n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4D9X7_9GAMM
phosphoenolpyruvate carboxylase
BSR_inoc_157159_52
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

66872..67258
DNA (387bp) protein (129aa)
aspartate alpha-decarboxylase (EC:4.1.1.11)
Aspartate 1-decarboxylase n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=PAND_THICR
Tax=CG_Thiomicrospira_01
BSR_inoc_157159_53
Thiomicrospira crunogena, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(67523..68206)
DNA (684bp) protein (228aa)
OmpA/MotB family protein n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31FF8_THICR
OmpA/MotB protein
OmpA/MotB family protein {ECO:0000313|EMBL:ABB42115.1}; TaxID=317025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thiomicrospira.;" source="Thiomicrospira crunogena (strain XCL-2).;"
BSR_inoc_157159_54
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(68223..68993)
DNA (771bp) protein (257aa)
hypothetical protein n=1 Tax=Thiomicrospira halophila RepID=UPI00037B3E31
MotA/TolQ/ExbB proton channel
Tax=CG_Thiomicrospira_01
BSR_inoc_157159_55
Thioalkalimicrobium cyclicum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(69019..69873)
DNA (855bp) protein (285aa)
Pantothenate synthetase {ECO:0000256|HAMAP-Rule:MF_00158}; Short=PS {ECO:0000256|HAMAP-Rule:MF_00158};; EC=6.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00158};; Pantoate--beta-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00158}; Pantoate-activating enzyme {ECO:0000256|HAMAP-Rule:MF_00158}; TaxID=717773 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1).;"
Pantothenate synthetase n=1 Tax=Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1) RepID=F6D982_THICA
pantothenate synthetase
BSR_inoc_157159_56
Thioalkalimicrobium cyclicum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(69870..70664)
DNA (795bp) protein (265aa)
3-methyl-2-oxobutanoate hydroxymethyltransferase (EC:2.1.2.11)
3-methyl-2-oxobutanoate hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00156, ECO:0000256|SAAS:SAAS00094725}; EC=2.1.2.11 {ECO:0000256|HAMAP-Rule:MF_00156, ECO:0000256|SAAS:SAAS00094725};; Ketopantoate hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00156}; TaxID=717773 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1).;"
3-methyl-2-oxobutanoate hydroxymethyltransferase n=1 Tax=Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1) RepID=F6D983_THICA
BSR_inoc_157159_57
Thiomicrospira crunogena, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(70673..71164)
DNA (492bp) protein (164aa)
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC:2.7.6.3)
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase {ECO:0000313|EMBL:ABB42119.1}; EC=2.7.6.3 {ECO:0000313|EMBL:ABB42119.1};; TaxID=317025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thiomicrospira.;" source="Thiomicrospira crunogena (strain XCL-2).;"
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31FF4_THICR
BSR_inoc_157159_58
Hydrogenovibrio marinus, Hydrogenovibrio, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(71169..72584)
DNA (1416bp) protein (472aa)
Poly(A) polymerase I {ECO:0000256|HAMAP-Rule:MF_00957}; Short=PAP I {ECO:0000256|HAMAP-Rule:MF_00957};; EC=2.7.7.19 {ECO:0000256|HAMAP-Rule:MF_00957};; TaxID=28885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Hydrogenovibrio.;" source="Hydrogenovibrio marinus.;"
hypothetical protein n=1 Tax=Thiomicrospira arctica RepID=UPI000382B257
poly(A) polymerase
BSR_inoc_157159_59
Thiomicrospira crunogena, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

72903..73319
DNA (417bp) protein (139aa)
Cysteine desulfuration protein SufE n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31F56_THICR
Fe-S metabolism associated SufE
Cysteine desulfuration protein SufE {ECO:0000313|EMBL:ABB42217.1}; TaxID=317025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thiomicrospira.;" source="Thiomicrospira crunogena (strain XCL-2).;"
BSR_inoc_157159_60
Thioalkalimicrobium cyclicum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

73899..74237
DNA (339bp) protein (113aa)
Uncharacterized protein n=1 Tax=Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1) RepID=F6D9T2_THICA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEG32131.1}; TaxID=717773 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1).;"
Displaying items 31-60 of 62 in total

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