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BSR_inoc_157159

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Displaying items 1-30 of 62 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BSR_inoc_157159_1
Osedax symbiont Rs1, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(119..715)
DNA (597bp) protein (199aa)
hypothetical protein n=1 Tax=Teredinibacter turnerae RepID=UPI0003697749
Csm2 protein {ECO:0000313|EMBL:EPJ43909.1}; TaxID=1330036 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; unclassified Oceanospirillaceae.;" source="Osedax symbiont Rs1.;"
RloB protein
BSR_inoc_157159_2
Nitrincola sp. AK23, Nitrincola, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(725..1996)
DNA (1272bp) protein (424aa)
RloA protein n=1 Tax=Alishewanella aestuarii B11 RepID=J1QMU6_9ALTE
Putative ATPase {ECO:0000313|EMBL:EXJ09648.1}; TaxID=1229521 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Nitrincola.;" source="Nitrincola sp. AK23.;"
RloA protein
BSR_inoc_157159_3
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2274..3620)
DNA (1347bp) protein (449aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4D9S8_9GAMM
histidine kinase
BSR_inoc_157159_4
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3642..4340)
DNA (699bp) protein (233aa)
Two component transcriptional regulator PhoB, winged helix family n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4D9S7_9GAMM
chemotaxis protein CheY
Chemotaxis protein CheY {ECO:0000313|EMBL:AHF00751.1}; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
BSR_inoc_157159_5
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4350..5084)
DNA (735bp) protein (245aa)
Phosphate-specific transport system accessory protein PhoU n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4D9S6_9GAMM
PhoU family transcriptional regulator
Phosphate-specific transport system accessory protein PhoU {ECO:0000256|PIRNR:PIRNR003107}; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
BSR_inoc_157159_6
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5144..5962)
DNA (819bp) protein (273aa)
Phosphate import ATP-binding protein PstB {ECO:0000256|HAMAP-Rule:MF_01702}; EC=3.6.3.27 {ECO:0000256|HAMAP-Rule:MF_01702};; ABC phosphate transporter {ECO:0000256|HAMAP-Rule:MF_01702}; Phosphate-transporting ATPase {ECO:0000256|HAMAP-Rule:MF_01702}; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
Phosphate ABC transporter, ATPase subunit n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4D9S5_9GAMM
pstB; phosphate ABC transporter ATP-binding protein
BSR_inoc_157159_7
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6049..7695)
DNA (1647bp) protein (549aa)
Phosphate ABC transporter, inner membrane subunit PstA n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4D9S4_9GAMM
phosphate ABC transporter permease
Phosphate ABC transporter permease {ECO:0000313|EMBL:AHF00748.1}; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
BSR_inoc_157159_8
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7714..9981)
DNA (2268bp) protein (756aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4D9S3_9GAMM
phosphate ABC transporter permease
Phosphate ABC transporter permease {ECO:0000313|EMBL:AHF00747.1}; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
BSR_inoc_157159_9
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10316..11722
DNA (1407bp) protein (469aa)
glnA; glutamine synthetase (EC:6.3.1.2)
glutamine synthetase n=1 Tax=Thiomicrospira arctica RepID=UPI000360D55D
Tax=CG_Thiomicrospira_01
BSR_inoc_157159_10
Thiomicrospira crunogena, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11892..13709
DNA (1818bp) protein (606aa)
hypothetical protein n=1 Tax=Thiomicrospira arctica RepID=UPI00037106DC
diguanylate cyclase/phosphodiesterase
Diguanylate cyclase/phosphodiesterase {ECO:0000313|EMBL:ABB42412.1}; TaxID=317025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thiomicrospira.;" source="Thiomicrospira crunogena (strain XCL-2).;"
BSR_inoc_157159_11
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14110..14610)
DNA (501bp) protein (167aa)
Lipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|RuleBase:RU000594}; EC=3.4.23.36 {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|RuleBase:RU000594};; Prolipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161}; Signal peptidase II {ECO:0000256|HAMAP-Rule:MF_00161}; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
Lipoprotein signal peptidase n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4D887_9GAMM
signal peptidase
BSR_inoc_157159_12
RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(14625..14837)
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=planctomycete KSU-1 RepID=I3IHF7_9PLAN
hypothetical protein
Tax=RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated
BSR_inoc_157159_13
Sulfurimonas denitrificans, Sulfurimonas, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14834..15127)
DNA (294bp) protein (98aa)
Putative uncharacterized protein n=1 Tax=Sulfurimonas denitrificans (strain ATCC 33889 / DSM 1251) RepID=Q30QV0_SULDN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABB44631.1}; TaxID=326298 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Helicobacteraceae; Sulfurimonas.;" source="Sulfurimonas denitrificans (strain ATCC 33889 / DSM 1251); (Thiomicrospira denitrificans (strain ATCC 33889 / DSM 1251)).;"
BSR_inoc_157159_14
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15256..18084)
DNA (2829bp) protein (943aa)
ileS; isoleucyl-tRNA synthetase (EC:6.1.1.5)
Isoleucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02002, ECO:0000256|SAAS:SAAS00106059}; EC=6.1.1.5 {ECO:0000256|HAMAP-Rule:MF_02002, ECO:0000256|SAAS:SAAS00106059};; Isoleucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02002}; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
Isoleucine--tRNA ligase n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4D888_9GAMM
BSR_inoc_157159_15
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18101..19039)
DNA (939bp) protein (313aa)
Riboflavin biosynthesis protein {ECO:0000256|PIRNR:PIRNR004491}; EC=2.7.1.26 {ECO:0000256|PIRNR:PIRNR004491};; EC=2.7.7.2 {ECO:0000256|PIRNR:PIRNR004491};; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
Riboflavin biosynthesis protein RibF n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4D889_9GAMM
FMN adenylyltransferase
BSR_inoc_157159_16
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19211..19651)
DNA (441bp) protein (147aa)
Putative uncharacterized protein n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4DCI9_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHF01864.1}; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
BSR_inoc_157159_17
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19725..20507
DNA (783bp) protein (261aa)
Flagellin domain protein n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4DCI8_9GAMM
flagellin
Flagellin {ECO:0000313|EMBL:AHF01865.1}; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
BSR_inoc_157159_18
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20634..21281
DNA (648bp) protein (216aa)
Prolyl 4-hydroxylase alpha subunit n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4DCI7_9GAMM
2OG-Fe(II) oxygenase
2OG-Fe(II) oxygenase {ECO:0000313|EMBL:AHF01866.1}; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
BSR_inoc_157159_19
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


21505..24273
DNA (2769bp) protein (923aa)
Valine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00026840}; EC=6.1.1.9 {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00105779};; Valyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02004}; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
Valine--tRNA ligase n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4DCI6_9GAMM
valyl-tRNA synthetase
BSR_inoc_157159_20
Thioalkalimicrobium cyclicum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24251..24958
DNA (708bp) protein (236aa)
SH3-like region n=1 Tax=Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1) RepID=F6DA29_THICA
SH3 domain-containing protein
SH3-like region {ECO:0000313|EMBL:AEG32160.1}; Flags: Precursor;; TaxID=717773 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1).;"
BSR_inoc_157159_21
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25229..25948)
DNA (720bp) protein (240aa)
hypothetical protein n=1 Tax=Thiomicrospira arctica RepID=UPI000375DF4B
thiol:disulfide interchange protein DsbC
Thiol:disulfide interchange protein DsbC {ECO:0000313|EMBL:AHF01869.1}; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
BSR_inoc_157159_22
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25966..26868)
DNA (903bp) protein (301aa)
Tyrosine recombinase XerD n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4DCI3_9GAMM
tyrosine recombinase XerD
Tyrosine recombinase XerD {ECO:0000256|HAMAP-Rule:MF_01807}; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
BSR_inoc_157159_23
Thioalkalimicrobium cyclicum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26945..30277)
DNA (3333bp) protein (1111aa)
Acriflavin resistance protein n=1 Tax=Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1) RepID=F6DA32_THICA
Acriflavin resistance protein {ECO:0000313|EMBL:AEG32163.1}; TaxID=717773 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1).;"
acriflavin resistance protein
BSR_inoc_157159_24
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30281..31381)
DNA (1101bp) protein (367aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4DCI1_9GAMM
secretion protein HlyD
Secretion protein HlyD {ECO:0000313|EMBL:AHF01872.1}; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
BSR_inoc_157159_25
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31400..32773)
DNA (1374bp) protein (458aa)
Outer membrane efflux protein n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4DCI0_9GAMM
transporter
Transporter {ECO:0000313|EMBL:AHF01873.1}; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
BSR_inoc_157159_26
Thioalkalimicrobium cyclicum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33122..33754)
DNA (633bp) protein (211aa)
Uncharacterized protein n=1 Tax=Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1) RepID=F6DA35_THICA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEG32166.1}; TaxID=717773 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1).;"
BSR_inoc_157159_27
Thiomicrospira crunogena, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33853..34980
DNA (1128bp) protein (376aa)
Erythronate-4-phosphate dehydrogenase {ECO:0000255|HAMAP-Rule:MF_01825}; EC=1.1.1.290 {ECO:0000255|HAMAP-Rule:MF_01825};; TaxID=317025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thiomicrospira.;" source="Thiomicrospira crunogena (strain XCL-2).;"
hypothetical protein n=1 Tax=Thiomicrospira halophila RepID=UPI00036A3763
D-isomer specific 2-hydroxyacid dehydrogenase
BSR_inoc_157159_28
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35154..35726
DNA (573bp) protein (191aa)
Putative uncharacterized protein n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4DCH7_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHF01876.1}; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
BSR_inoc_157159_29
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

36089..37339
DNA (1251bp) protein (417aa)
Membrane protein involved in aromatic hydrocarbon degradation n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4DCH6_9GAMM
aromatic hydrocarbon degradation protein
Aromatic hydrocarbon degradation protein {ECO:0000313|EMBL:AHF01877.1}; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
BSR_inoc_157159_30
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

37709..38530
DNA (822bp) protein (274aa)
Ketopantoate reductase ApbA/PanE domain protein n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4DCH5_9GAMM
epimerase
Epimerase {ECO:0000313|EMBL:AHF01878.1}; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
Displaying items 1-30 of 62 in total

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