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BSR_inoc_197241

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BSR_inoc_197241_1
Methylophaga frappieri, Methylophaga, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3..5588)
DNA (5586bp) protein (1862aa)
Large exoproteins involved in heme utilization or adhesion n=1 Tax=Methylophaga frappieri (strain ATCC BAA-2434 / DSM 25690 / JAM7) RepID=I1YJB4_METFJ
Large exoproteins involved in heme utilization or adhesion
Large exoproteins involved in heme utilization or adhesion {ECO:0000313|EMBL:AFJ03007.1}; Flags: Precursor;; TaxID=754477 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Methylophaga.;" source="Methylophaga frappieri (strain ATCC BAA-2434 / DSM 25690 / JAM7).;"
BSR_inoc_197241_2
Thioalkalimicrobium cyclicum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5772..7601)
DNA (1830bp) protein (610aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=717773 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1).;"
hypothetical protein n=1 Tax=Thiomicrospira halophila RepID=UPI00037B9425
integral membrane sensor signal transduction histidine kinase
BSR_inoc_197241_3
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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7629..8366
DNA (738bp) protein (246aa)
hypothetical protein n=1 Tax=Thiomicrospira halophila RepID=UPI000374A228
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:AHF01785.1}; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
BSR_inoc_197241_4
Marinomonas sp. MWYL1, Marinomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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8363..9406
DNA (1044bp) protein (348aa)
hypothetical protein n=1 Tax=Catenovulum agarivorans RepID=UPI00035F1677
cytidyltransferase-like protein
Cytidyltransferase-related domain {ECO:0000313|EMBL:ABR69187.1}; TaxID=400668 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Marinomonas.;" source="Marinomonas sp. (strain MWYL1).;"
BSR_inoc_197241_5
Pseudoalteromonas piscicida, Pseudoalteromonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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9393..9851
DNA (459bp) protein (153aa)
hypothetical protein n=1 Tax=Catenovulum agarivorans RepID=UPI000303DCFC
Cytidyltransferase-like protein {ECO:0000313|EMBL:ERG34116.1}; TaxID=1117317 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Pseudoalteromonadaceae; Pseudoalteromonas.;" source="Pseudoalteromonas piscicida JCM 20779.;"
cytidyltransferase-like protein
BSR_inoc_197241_6
Marinobacter sp. ELB17, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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9986..10951
DNA (966bp) protein (322aa)
Putative transposase n=1 Tax=Marinobacter sp. ELB17 RepID=A3JHZ5_9ALTE
Putative transposase {ECO:0000313|EMBL:EAZ98259.1}; TaxID=270374 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacter.;" source="Marinobacter sp. ELB17.;"
hypothetical protein
BSR_inoc_197241_7
Thioalkalimicrobium cyclicum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(11203..12849)
DNA (1647bp) protein (549aa)
Acetolactate synthase {ECO:0000313|EMBL:AEG32415.1}; EC=2.2.1.6 {ECO:0000313|EMBL:AEG32415.1};; TaxID=717773 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1).;"
Acetolactate synthase n=1 Tax=Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1) RepID=F6DBL3_THICA
acetolactate synthase
BSR_inoc_197241_8
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(12919..13560)
DNA (642bp) protein (214aa)
hypothetical protein n=1 Tax=Thiomicrospira arctica RepID=UPI00036441A7
thiol:disulfide interchange protein DsbA
Thiol:disulfide interchange protein {ECO:0000256|PIRNR:PIRNR001488}; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
BSR_inoc_197241_9
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(13574..14737)
DNA (1164bp) protein (388aa)
Cytochrome c-type biogenesis protein CcsB n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4DA65_9GAMM
cytochrome C biogenesis protein
Cytochrome C biogenesis protein {ECO:0000313|EMBL:AHF02135.1}; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
BSR_inoc_197241_10
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(14748..16736)
DNA (1989bp) protein (663aa)
Putative uncharacterized protein n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4DA66_9GAMM
cytochrome C biogenesis protein ResB
Cytochrome C biogenesis protein ResB {ECO:0000313|EMBL:AHF02134.1}; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
BSR_inoc_197241_11
unknown

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16891..17037
DNA (147bp) protein (49aa)

This feature has no annotations

BSR_inoc_197241_12
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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17047..17664
DNA (618bp) protein (206aa)
Probable GTP-binding protein EngB n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4DA67_9GAMM
GTP-binding protein YsxC
Probable GTP-binding protein EngB {ECO:0000256|HAMAP-Rule:MF_00321}; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
BSR_inoc_197241_13
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(17890..18717)
DNA (828bp) protein (276aa)
Peptidase M48 Ste24p n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4DA68_9GAMM
peptidase M48
Peptidase M48 {ECO:0000313|EMBL:AHF02132.1}; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
BSR_inoc_197241_14
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19138..20073
DNA (936bp) protein (312aa)
coproporphyrinogen III oxidase (EC:1.3.3.3)
Coproporphyrinogen-III oxidase, aerobic n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31JQ9_THICR
Tax=CG_Thiomicrospira_01
BSR_inoc_197241_15
Hydrogenovibrio marinus, Hydrogenovibrio, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20079..20453
DNA (375bp) protein (125aa)
hypothetical protein n=1 Tax=Thiomicrospira arctica RepID=UPI000373FE68
Heat shock protein 15 {ECO:0000256|PIRNR:PIRNR016821}; TaxID=28885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Hydrogenovibrio.;" source="Hydrogenovibrio marinus.;"
RNA-binding S4 domain-containing protein
BSR_inoc_197241_16
Desulfotignum phosphitoxidans, Desulfotignum, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(20440..20817)
DNA (378bp) protein (126aa)
PAS/PAC sensor hybrid histidine kinase n=1 Tax=Desulfotignum phosphitoxidans DSM 13687 RepID=S0FY50_9DELT
PAS/PAC sensor hybrid histidine kinase {ECO:0000313|EMBL:EMS79998.1}; TaxID=1286635 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfotignum.;" source="Desulfotignum phosphitoxidans DSM 13687.;"
response regulator receiver protein
BSR_inoc_197241_17
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20814..22499)
DNA (1686bp) protein (562aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4DA71_9GAMM
histidine kinase
BSR_inoc_197241_18
Thiocystis violascens, Thiocystis, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(22492..22947)
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Thiocystis violascens (strain ATCC 17096 / DSM 198 / 6111) RepID=I3YBS2_THIV6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFL74440.1}; Flags: Precursor;; TaxID=765911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiocystis.;" source="Thiocystis violascens (strain ATCC 17096 / DSM 198 / 6111) (Chromatium; violascens).;"
BSR_inoc_197241_19
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23191..25674
DNA (2484bp) protein (828aa)
Uncharacterized protein id=1345799 bin=GWE1_T_denit_62_9 species=Sulfuricella denitrificans genus=Sulfuricella taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
signal transduction protein
Tax=CG_Thiomicrospira_01
BSR_inoc_197241_20
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25758..26570)
DNA (813bp) protein (271aa)
Cof-like hydrolase n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4DAR1_9GAMM
haloacid dehalogenase
Haloacid dehalogenase {ECO:0000313|EMBL:AHF01965.1}; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
BSR_inoc_197241_21
Desulfurispirillum indicum, Desulfurispirillum, Chrysiogenales, Chrysiogenetes, Chrysiogenetes, Bacteria

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26752..27894
DNA (1143bp) protein (381aa)
Lytic transglycosylase catalytic n=1 Tax=Desulfurispirillum indicum (strain ATCC BAA-1389 / S5) RepID=E6W5F9_DESIS
lytic transglycosylase catalytic
Lytic transglycosylase catalytic {ECO:0000313|EMBL:ADU64890.1}; TaxID=653733 species="Bacteria; Chrysiogenetes; Chrysiogenales; Chrysiogenaceae; Desulfurispirillum.;" source="Desulfurispirillum indicum (strain ATCC BAA-1389 / S5).;"
BSR_inoc_197241_22
unknown

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comp(27853..28017)
DNA (165bp) protein (55aa)

This feature has no annotations

BSR_inoc_197241_23
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(28075..28863)
DNA (789bp) protein (263aa)
Putative uncharacterized protein n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4DA79_9GAMM
membrane protein
Membrane protein {ECO:0000313|EMBL:AHF02121.1}; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
BSR_inoc_197241_24
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28923..30593)
DNA (1671bp) protein (557aa)
Membrane protein insertase YidC n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4DA78_9GAMM
membrane protein
Membrane protein insertase YidC {ECO:0000256|HAMAP-Rule:MF_01810, ECO:0000256|SAAS:SAAS00003942}; Foldase YidC {ECO:0000256|HAMAP-Rule:MF_01810}; Membrane integrase YidC {ECO:0000256|HAMAP-Rule:MF_01810}; Membrane protein YidC {ECO:0000256|HAMAP-Rule:MF_01810}; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
BSR_inoc_197241_25
Thiomicrospira crunogena, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(30603..31007)
DNA (405bp) protein (135aa)
Ribonuclease P protein component {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143752}; Short=RNase P protein {ECO:0000256|HAMAP-Rule:MF_00227};; Short=RNaseP protein {ECO:0000256|HAMAP-Rule:MF_00227};; EC=3.1.26.5 {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143815};; Protein C5 {ECO:0000256|HAMAP-Rule:MF_00227}; TaxID=317025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thiomicrospira.;" source="Thiomicrospira crunogena (strain XCL-2).;"
Ribonuclease P protein component n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4DA77_9GAMM
ribonuclease P protein component
BSR_inoc_197241_26
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(31038..31172)
DNA (135bp) protein (45aa)
50S ribosomal protein L34 n=2 Tax=Thioalkalimicrobium RepID=F6DBK0_THICA
rpmH; 50S ribosomal protein L34
50S ribosomal protein L34 {ECO:0000256|HAMAP-Rule:MF_00391, ECO:0000256|SAAS:SAAS00020245}; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
BSR_inoc_197241_27
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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31351..32451
DNA (1101bp) protein (367aa)
hypothetical protein n=1 Tax=Thiomicrospira halophila RepID=UPI00036702A6
DNA replication and repair protein RecF
Tax=CG_Thiomicrospira_01
BSR_inoc_197241_28
unknown

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32448..32738
DNA (291bp) protein (97aa)

This feature has no annotations

BSR_inoc_197241_29
Saccharophagus degradans, Saccharophagus, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(32840..33499)
DNA (660bp) protein (220aa)
Putative uncharacterized protein n=1 Tax=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) RepID=Q21L15_SACD2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD80614.1}; TaxID=203122 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Saccharophagus.;" source="Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024).;"
BSR_inoc_197241_30
Thioalkalimicrobium cyclicum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33808..36231
DNA (2424bp) protein (808aa)
DNA gyrase subunit B (EC:5.99.1.3)
DNA gyrase subunit B {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363};; TaxID=717773 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1).;"
DNA gyrase subunit B n=1 Tax=Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1) RepID=F6DBK2_THICA
Displaying items 1-30 of 32 in total

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