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BSR_inoc_189518

Search features with annotation key words

Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BSR_inoc_189518_1
GWC2_Geobacteraceae_53_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..353
DNA (351bp) protein (117aa)
Putative transcriptional regulator with HTH domain n=1 Tax=Desulfobacter postgatei 2ac9 RepID=I5AYT4_9DELT
transcriptional regulator
Tax=GWC2_Geobacteraceae_53_11_curated
BSR_inoc_189518_2
Gilliamella apicola, Gilliamella, Orbales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

350..841
DNA (492bp) protein (164aa)
Type I restriction-modification system methyltransferase subunit (EC:2.1.1.72)
Uncharacterized protein n=1 Tax=Enterobacter cloacae BWH 31 RepID=V3HIS9_ENTCL
Type I restriction-modification system methyltransferase subunit {ECO:0000313|EMBL:KES17306.1}; TaxID=1445514 species="Bacteria; Proteobacteria; Gammaproteobacteria; Orbales; Orbaceae; Gilliamella.;" source="Gilliamella apicola SCGC AB-598-I20.;"
BSR_inoc_189518_3
Frischella perrara, Frischella, Orbales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

852..1631
DNA (780bp) protein (260aa)
Type I restriction-modification system methyltransferase subunit (EC:2.1.1.72)
Type I restriction-modification system methyltransferase subunit {ECO:0000313|EMBL:AJA45945.1}; EC=2.1.1.72 {ECO:0000313|EMBL:AJA45945.1};; TaxID=1267021 species="Bacteria; Proteobacteria; Gammaproteobacteria; Orbales; Orbaceae; Frischella.;" source="Frischella perrara.;"
Uncharacterized protein n=1 Tax=Enterobacter cloacae BWH 31 RepID=V3HIS9_ENTCL
BSR_inoc_189518_4
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1647..2408)
DNA (762bp) protein (254aa)
Putative uncharacterized protein n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31JA3_THICR
hypothetical protein
Tax=CG_Thiomicrospira_01
BSR_inoc_189518_5
Thioalkalimicrobium cyclicum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2419..3522)
DNA (1104bp) protein (368aa)
tRNA/tmRNA (uracil-C(5))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01011, ECO:0000256|SAAS:SAAS00055279}; EC=2.1.1.35 {ECO:0000256|HAMAP-Rule:MF_01011};; tRNA (uracil(54)-C(5))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01011}; tRNA(m5U54)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01011}; tmRNA (uracil(341)-C(5))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01011}; TaxID=717773 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1).;"
tRNA/tmRNA (uracil-C(5))-methyltransferase n=1 Tax=Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1) RepID=F6DB15_THICA
tRNA (uracil-5-)-methyltransferase
BSR_inoc_189518_6

Not on your lists

3714..4280
DNA (567bp) protein (189aa)
Uncharacterized protein {ECO:0000313|EMBL:KKO08809.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
BSR_inoc_189518_7
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


4297..4890
DNA (594bp) protein (198aa)
Non-canonical purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020486}; EC=3.6.1.19 {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020468};; Non-standard purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; Nucleoside-triphosphate diphosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; Nucleoside-triphosphate pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
Non-canonical purine NTP pyrophosphatase n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4D986_9GAMM
nucleoside-triphosphate diphosphatase
BSR_inoc_189518_8
Thiomicrospira crunogena, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4887..6071
DNA (1185bp) protein (395aa)
Coproporphyrinogen III oxidase, anaerobic {ECO:0000313|EMBL:ABB40713.1}; EC=1.3.99.22 {ECO:0000313|EMBL:ABB40713.1};; TaxID=317025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thiomicrospira.;" source="Thiomicrospira crunogena (strain XCL-2).;"
Coproporphyrinogen III oxidase, anaerobic n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31JG0_THICR
oxygen-independent coproporphyrinogen III oxidase
BSR_inoc_189518_9
Hydrogenovibrio marinus, Hydrogenovibrio, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6092..7981
DNA (1890bp) protein (630aa)
AsmA protein n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31JF9_THICR
Uncharacterized protein {ECO:0000313|EMBL:KDN95986.1}; TaxID=28885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Hydrogenovibrio.;" source="Hydrogenovibrio marinus.;"
AsmA protein
BSR_inoc_189518_10
Thioalkalimicrobium cyclicum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8075..9379)
DNA (1305bp) protein (435aa)
DEAD/DEAH box helicase domain protein n=1 Tax=Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1) RepID=F6DB63_THICA
DEAD/DEAH box helicase domain-containing protein
DEAD/DEAH box helicase domain protein {ECO:0000313|EMBL:AEG30803.1}; TaxID=717773 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1).;"
BSR_inoc_189518_11
unknown

Not on your lists

comp(9546..10622)
DNA (1077bp) protein (359aa)

This feature has no annotations

BSR_inoc_189518_12

Not on your lists

comp(10623..11945)
DNA (1323bp) protein (441aa)
hypothetical protein n=1 Tax=Aquaspirillum serpens RepID=UPI0003B7975A
Uncharacterized protein {ECO:0000313|EMBL:KKO08815.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
BSR_inoc_189518_13
Thioalkalimicrobium cyclicum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12331..13653
DNA (1323bp) protein (441aa)
hypothetical protein n=1 Tax=Thiomicrospira halophila RepID=UPI00038277E3
TolC family type I secretion outer membrane protein
Type I secretion outer membrane protein, TolC family {ECO:0000313|EMBL:AEG31523.1}; Flags: Precursor;; TaxID=717773 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1).;"
BSR_inoc_189518_14
Halomonas titanicae, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13708..15411
DNA (1704bp) protein (568aa)
hypothetical protein n=1 Tax=Thiomicrospira halophila RepID=UPI00035DF484
ATPase, type I secretion system, PrtD {ECO:0000313|EMBL:ELY20738.1}; TaxID=1204738 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halomonas titanicae BH1.;"
Type I secretion system ATPase, PrtD
BSR_inoc_189518_15
Sulfurimonas sp. AST-10, Sulfurimonas, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

15427..16878
DNA (1452bp) protein (484aa)
hypothetical protein n=1 Tax=Thiomicrospira halophila RepID=UPI00037D6344
Uncharacterized protein {ECO:0000313|EMBL:EQB34346.1}; TaxID=1172190 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Helicobacteraceae; Sulfurimonas.;" source="Sulfurimonas sp. AST-10.;"
sapE; S-layer protein SapE, type I secretion inner membrane fusion protein
BSR_inoc_189518_16
Alteromonas macleodii, Alteromonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16897..17982
DNA (1086bp) protein (362aa)
dTDP-glucose-4,6-dehydratase (EC:4.2.1.46)
dTDP-glucose 4,6-dehydratase {ECO:0000256|RuleBase:RU004473}; EC=4.2.1.46 {ECO:0000256|RuleBase:RU004473};; TaxID=1004787 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Alteromonas.;" source="Alteromonas macleodii (strain Balearic Sea AD45).;"
dTDP-glucose 4,6-dehydratase n=1 Tax=Alteromonas macleodii (strain Balearic Sea AD45) RepID=K0EJR7_ALTMB
BSR_inoc_189518_17

Not on your lists

17986..18870
DNA (885bp) protein (295aa)
glucose-1-phosphate thymidylyltransferase (EC:2.7.7.24)
glucose-1-phosphate thymidylyltransferase n=1 Tax=Gilvimarinus chinensis RepID=UPI00035D381B
Uncharacterized protein {ECO:0000313|EMBL:KKN56481.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
BSR_inoc_189518_18
Hydrogenobaculum sp. Y04AAS1, Hydrogenobaculum, Aquificales, Aquificae, Aquificae, Bacteria

Not on your lists

19031..19948
DNA (918bp) protein (306aa)
Glycosyl transferase family 2 n=1 Tax=Hydrogenobaculum sp. (strain Y04AAS1) RepID=B4U6C3_HYDS0
family 2 glycosyl transferase
Glycosyl transferase family 2 {ECO:0000313|EMBL:ACG58259.1}; TaxID=380749 species="Bacteria; Aquificae; Aquificales; Aquificaceae; Hydrogenobaculum.;" source="Hydrogenobaculum sp. (strain Y04AAS1).;"
BSR_inoc_189518_19
Chloroherpeton thalassium, Chloroherpeton, Chlorobiales, Chlorobia, Chlorobi, Bacteria

Not on your lists

19954..20841
DNA (888bp) protein (296aa)
Glycosyl transferase family 2 n=1 Tax=Chloroherpeton thalassium (strain ATCC 35110 / GB-78) RepID=B3QVC3_CHLT3
family 2 glycosyl transferase
Glycosyl transferase family 2 {ECO:0000313|EMBL:ACF14523.1}; TaxID=517418 species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chloroherpeton.;" source="Chloroherpeton thalassium (strain ATCC 35110 / GB-78).;"
BSR_inoc_189518_20
Burkholderia sp. CCGE1002, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20907..21584)
DNA (678bp) protein (226aa)
Transcriptional regulator, Crp/Fnr family n=1 Tax=Burkholderia sp. (strain CCGE1002) RepID=D5WG26_BURSC
Crp/Fnr family transcriptional regulator
Transcriptional regulator, Crp/Fnr family {ECO:0000313|EMBL:ADG19402.1}; TaxID=640511 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. (strain CCGE1002).;"
BSR_inoc_189518_21
Burkholderia sp. CCGE1002, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21606..23399
DNA (1794bp) protein (598aa)
hypothetical protein n=1 Tax=Burkholderia sp. WSM4176 RepID=UPI00035C96E7
adenylate/guanylate cyclase with Chase sensor
Adenylate/guanylate cyclase with Chase sensor {ECO:0000313|EMBL:ADG19404.1}; TaxID=640511 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. (strain CCGE1002).;"
BSR_inoc_189518_22
delta proteobacterium MLMS-1, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23453..24241)
DNA (789bp) protein (263aa)
hypothetical protein n=1 Tax=Thiomicrospira halophila RepID=UPI00037EEFE9
SAPC family protein {ECO:0000313|EMBL:EAT04676.1}; TaxID=262489 species="Bacteria; Proteobacteria; Deltaproteobacteria.;" source="delta proteobacterium MLMS-1.;"
Peptide transport system permease protein sapC
BSR_inoc_189518_23
delta proteobacterium MLMS-1, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24350..25687
DNA (1338bp) protein (446aa)
Hemolysin-type calcium-binding region n=1 Tax=delta proteobacterium MLMS-1 RepID=Q1NPX0_9DELT
Hemolysin-type calcium-binding region {ECO:0000313|EMBL:EAT03748.1}; TaxID=262489 species="Bacteria; Proteobacteria; Deltaproteobacteria.;" source="delta proteobacterium MLMS-1.;"
BSR_inoc_189518_24
Marichromatium purpuratum, Marichromatium, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25855..28755)
DNA (2901bp) protein (967aa)
Putative uncharacterized protein n=1 Tax=Marichromatium purpuratum 984 RepID=F9TYB4_MARPU
calcium-binding protein
Calcium-binding protein {ECO:0000313|EMBL:AHF02586.1}; TaxID=765910 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Marichromatium.;" source="Marichromatium purpuratum 984.;"
BSR_inoc_189518_25
Halomonas campaniensis, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29093..29362
DNA (270bp) protein (90aa)
Putative uncharacterized protein n=1 Tax=Halomonas sp. TD01 RepID=F7SST2_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIA73716.1}; TaxID=213554 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halomonas campaniensis.;"
BSR_inoc_189518_26
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29480..30355
DNA (876bp) protein (292aa)
prenyltransferase UbiA n=1 Tax=Geovibrio thiophilus RepID=UPI0003B5E60A
UbiA prenyltransferase family protein
Tax=CG_Thiomicrospira_01
BSR_inoc_189518_27
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30361..31305
DNA (945bp) protein (315aa)
Putative transmembrane oxidoreductase protein n=1 Tax=Burkholderia xenovorans (strain LB400) RepID=Q144M9_BURXL
3-beta hydroxysteroid dehydrogenase/isomerase family protein
Tax=CG_Thiomicrospira_01
BSR_inoc_189518_28
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31305..32600
DNA (1296bp) protein (432aa)
15-cis-phytoene desaturase n=1 Tax=Pseudomonas sp. (strain M1) RepID=L1I028_PSEUO
amine oxidase
Tax=CG_Thiomicrospira_01
BSR_inoc_189518_29
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32597..33004
DNA (408bp) protein (136aa)
GtrA family protein n=1 Tax=Methylotenera sp. (strain 301) RepID=D7DHU0_METS0
GtrA family protein
Tax=CG_Thiomicrospira_01
BSR_inoc_189518_30
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33009..34691
DNA (1683bp) protein (561aa)
hypothetical protein n=1 Tax=Methylovulum miyakonense RepID=UPI0003655C3A
hypothetical protein
Tax=CG_Thiomicrospira_01
Displaying items 1-30 of 39 in total

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