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BSR_inoc_202744

Search features with annotation key words

Displaying items 1-30 of 107 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BSR_inoc_202744_1
Aromatoleum aromaticum, Aromatoleum, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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1..114
DNA (114bp) protein (38aa)
Transposase n=1 Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5NW73_AROAE
tnp2P13; transposase
Transposase {ECO:0000313|EMBL:CAI10691.1}; TaxID=76114 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Aromatoleum.;" source="Aromatoleum aromaticum (strain EbN1) (Azoarcus sp. (strain EbN1)).;"
BSR_inoc_202744_2
Alcaligenes faecalis, Alcaligenes, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(106..969)
DNA (864bp) protein (288aa)
Uncharacterized protein n=2 Tax=Pasteurella multocida RepID=I1VPM7_PASMD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KGP03077.1}; TaxID=511 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Alcaligenes.;" source="Alcaligenes faecalis.;"
BSR_inoc_202744_3
Shewanella sp. ANA-3, Shewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(966..2210)
DNA (1245bp) protein (415aa)
Restriction modification system DNA specificity subunit n=1 Tax=Salmonella enterica subsp. enterica serovar Meleagridis str. 0047 RepID=V1TFQ2_SALET
restriction modification system DNA specificity subunit
Restriction modification system DNA specificity domain {ECO:0000313|EMBL:ABK50457.1}; TaxID=94122 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella.;" source="Shewanella sp. (strain ANA-3).;"
BSR_inoc_202744_4
unknown

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comp(2200..2313)
DNA (114bp) protein (38aa)

This feature has no annotations

BSR_inoc_202744_5
unknown

Not on your lists

comp(2310..2642)
DNA (333bp) protein (111aa)

This feature has no annotations

BSR_inoc_202744_6
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2639..4036)
DNA (1398bp) protein (466aa)
Putative transcriptional regulator n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4D9H5_9GAMM
ATP-dependent DNA helicase
ATP-dependent DNA helicase {ECO:0000313|EMBL:AHF00655.1}; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
BSR_inoc_202744_7
Marinobacter sp. C1S70, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4026..5774)
DNA (1749bp) protein (583aa)
type I restriction enzyme HindVIIP M protein (EC:2.1.1.72)
DNA methyltransferase n=1 Tax=Marinobacter sp. C1S70 RepID=U7NI87_9ALTE
DNA methyltransferase {ECO:0000313|EMBL:ERS83017.1}; TaxID=1396859 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacter.;" source="Marinobacter sp. C1S70.;"
BSR_inoc_202744_8
Thiomicrospira crunogena, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6140..6607)
DNA (468bp) protein (156aa)
Putative uncharacterized protein n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31JC8_THICR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABB40745.1}; TaxID=317025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thiomicrospira.;" source="Thiomicrospira crunogena (strain XCL-2).;"
BSR_inoc_202744_9
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6901..7575)
DNA (675bp) protein (225aa)
Glutathione S-transferase domain protein n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4D7K2_9GAMM
glutathione S-transferase
Glutathione S-transferase {ECO:0000313|EMBL:AHF00946.1}; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
BSR_inoc_202744_10
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7604..7861)
DNA (258bp) protein (86aa)
4Fe-4S ferredoxin, iron-sulfur binding n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4D7K3_9GAMM
ferredoxin
Ferredoxin {ECO:0000313|EMBL:AHF00945.1}; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
BSR_inoc_202744_11
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7999..9453)
DNA (1455bp) protein (485aa)
Peptidase U32 n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4D7K4_9GAMM
protease
Protease {ECO:0000313|EMBL:AHF00944.1}; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
BSR_inoc_202744_12
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9488..10000)
DNA (513bp) protein (171aa)
Uracil-DNA glycosylase superfamily n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4D7K5_9GAMM
DNA glycosylase
DNA glycosylase {ECO:0000313|EMBL:AHF00943.1}; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
BSR_inoc_202744_13
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10077..10532)
DNA (456bp) protein (152aa)
Putative uncharacterized protein n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4D7K6_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHF00942.1}; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
BSR_inoc_202744_14
Thiomicrospira crunogena, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10815..11204)
DNA (390bp) protein (130aa)
Putative uncharacterized protein n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31IN1_THICR
NAD-binding homoserine dehydrogenase
Uncharacterized protein {ECO:0000313|EMBL:ABB40992.1}; TaxID=317025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thiomicrospira.;" source="Thiomicrospira crunogena (strain XCL-2).;"
BSR_inoc_202744_15
Thioalkalimicrobium cyclicum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11621..12958)
DNA (1338bp) protein (446aa)
Ribosomal protein S12 methylthiotransferase RimO {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00083292}; Short=S12 MTTase {ECO:0000256|HAMAP-Rule:MF_01865};; Short=S12 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865};; EC=2.8.4.4 {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00179441};; Ribosomal protein S12 (aspartate-C(3))-methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865}; Ribosome maturation factor RimO {ECO:0000256|HAMAP-Rule:MF_01865}; TaxID=717773 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1).;"
Ribosomal protein S12 methylthiotransferase RimO n=1 Tax=Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1) RepID=F6D8M7_THICA
30S ribosomal protein S12 methylthiotransferase
BSR_inoc_202744_16
Hydrogenovibrio marinus, Hydrogenovibrio, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13053..15641)
DNA (2589bp) protein (863aa)
hypothetical protein n=1 Tax=Thiomicrospira arctica RepID=UPI00036DE70A
Beta-(1-3)-glucosyl transferase {ECO:0000313|EMBL:KDN96266.1}; TaxID=28885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Hydrogenovibrio.;" source="Hydrogenovibrio marinus.;"
family 2 glycosyl transferase
BSR_inoc_202744_17
Marinobacterium sp. AK27, Marinobacterium, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15767..17152)
DNA (1386bp) protein (462aa)
DNA polymerase V n=1 Tax=Marinobacterium stanieri RepID=UPI0002559B74
DNA recombination protein RmuC {ECO:0000313|EMBL:KEA61828.1}; TaxID=1232683 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacterium.;" source="Marinobacterium sp. AK27.;"
DNA recombination protein rmuC
BSR_inoc_202744_18
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17165..18133)
DNA (969bp) protein (323aa)
Cation diffusion facilitator family transporter n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4D7Z6_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHF02218.1}; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
BSR_inoc_202744_19
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18155..18574)
DNA (420bp) protein (140aa)
Uncharacterized protein family UPF0093 n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4DBC5_9GAMM
membrane protein
Membrane protein {ECO:0000313|EMBL:AHF01382.1}; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
BSR_inoc_202744_20
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18671..19150
DNA (480bp) protein (160aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4DBC6_9GAMM
peptidyl-prolyl cis-trans isomerase
BSR_inoc_202744_21
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19406..21649)
DNA (2244bp) protein (748aa)
ATP-dependent Clp protease, ATP-binding subunit clpA n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4D7J6_9GAMM
ATP-dependent Clp protease ATP-binding protein {ECO:0000313|EMBL:AHF00952.1}; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
clpA; ATP-dependent Clp protease ATP-binding protein
BSR_inoc_202744_22
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21668..21979)
DNA (312bp) protein (104aa)
ATP-dependent Clp protease adapter protein ClpS n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4D7J7_9GAMM
ATP-dependent Clp protease ClpS
ATP-dependent Clp protease adapter protein ClpS {ECO:0000256|HAMAP-Rule:MF_00302}; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
BSR_inoc_202744_23
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22002..22796)
DNA (795bp) protein (265aa)
Chaperone protein dnaJ n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31GL8_THICR
molecular chaperone DnaJ
Tax=CG_Thiomicrospira_01
BSR_inoc_202744_24
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22932..23489
DNA (558bp) protein (186aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Pseudouridine synthase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WFC5_9GAMM
ribosomal large subunit pseudouridine synthase E
BSR_inoc_202744_25
Thioalkalimicrobium cyclicum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23517..24659
DNA (1143bp) protein (381aa)
tRNA-specific 2-thiouridylase MnmA {ECO:0000256|HAMAP-Rule:MF_00144}; EC=2.8.1.- {ECO:0000256|HAMAP-Rule:MF_00144};; TaxID=717773 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1).;"
tRNA-specific 2-thiouridylase MnmA n=1 Tax=Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1) RepID=F6D8M1_THICA
tRNA-specific 2-thiouridylase mnmA
BSR_inoc_202744_26
Thiomicrospira crunogena, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24656..25330
DNA (675bp) protein (225aa)
High frequency lysogenization protein HflD homolog n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31GN0_THICR
hypothetical protein
High frequency lysogenization protein HflD homolog {ECO:0000256|HAMAP-Rule:MF_00695}; TaxID=317025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thiomicrospira.;" source="Thiomicrospira crunogena (strain XCL-2).;"
BSR_inoc_202744_27
Thioalkalimicrobium cyclicum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25753..27642)
DNA (1890bp) protein (630aa)
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00143148}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00143148};; TaxID=717773 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1).;"
PpiC-type peptidyl-prolyl cis-trans isomerase n=1 Tax=Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1) RepID=F6DCB3_THICA
PpiC-type peptidyl-prolyl cis-trans isomerase
BSR_inoc_202744_28
Hydrogenovibrio marinus, Hydrogenovibrio, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27866..28225
DNA (360bp) protein (120aa)
Response regulator receiver domain protein (CheY-like) n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31GN3_THICR
Histidine kinase {ECO:0000313|EMBL:KDN95050.1}; TaxID=28885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Hydrogenovibrio.;" source="Hydrogenovibrio marinus.;"
response regulator receiver domain-containing protein
BSR_inoc_202744_29
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28285..29604)
DNA (1320bp) protein (440aa)
adenylosuccinate synthetase (EC:6.3.4.4)
Adenylosuccinate synthetase {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520}; Short=AMPSase {ECO:0000256|HAMAP-Rule:MF_00011};; Short=AdSS {ECO:0000256|HAMAP-Rule:MF_00011};; EC=6.3.4.4 {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520};; IMP--aspartate ligase {ECO:0000256|HAMAP-Rule:MF_00011}; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
Adenylosuccinate synthetase n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4DD26_9GAMM
BSR_inoc_202744_30
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29615..30796)
DNA (1182bp) protein (394aa)
ATP phosphoribosyltransferase regulatory subunit n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4DD27_9GAMM
ATP phosphoribosyltransferase
ATP phosphoribosyltransferase regulatory subunit {ECO:0000256|HAMAP-Rule:MF_00125, ECO:0000256|SAAS:SAAS00089029}; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
Displaying items 1-30 of 107 in total

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